Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0093
(880 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0451 + 23021139-23021269,23021366-23021498,23021594-230217... 34 0.17
06_03_0905 + 25843547-25844314 32 0.70
09_01_0025 - 441528-444284 31 1.6
07_01_0408 - 3137705-3138017,3139361-3139371,3140693-3140770,314... 30 2.8
07_01_0250 - 1864990-1865005,1865429-1865502,1865588-1865659,186... 30 2.8
03_06_0245 - 32619410-32619510,32619698-32620668,32620694-32621169 30 2.8
06_01_0318 - 2284481-2284594,2285340-2286044,2286589-2286609,228... 29 3.7
05_01_0488 - 4070506-4072277,4072455-4072557 29 3.7
03_06_0572 + 34812203-34812278,34812485-34813768,34813973-348140... 29 3.7
02_03_0167 - 15923872-15925683 29 3.7
02_01_0302 - 2021221-2023305 29 3.7
10_08_0738 - 20212220-20212282,20212387-20212593,20212690-202128... 29 4.9
04_04_0512 + 25806599-25808080 29 4.9
04_01_0471 + 6099768-6100094,6100384-6100416 29 4.9
03_01_0270 - 2085461-2086205,2086260-2086339,2086598-2086690,208... 29 4.9
02_02_0315 + 8872199-8872815,8873141-8873243,8873346-8873405,887... 29 4.9
01_06_0102 - 26447286-26448107,26448248-26448385,26448990-264493... 29 4.9
11_01_0344 + 2558950-2558971,2560389-2560465,2560543-2560833 29 6.5
04_04_0776 - 28000220-28000337,28000760-28000872,28001194-280012... 29 6.5
01_01_0539 + 3952039-3952219,3952295-3952984,3953115-3953191,395... 29 6.5
12_02_1265 - 27435096-27437675 28 8.6
10_01_0270 - 2876907-2877547,2877838-2878012 28 8.6
09_02_0226 - 6007656-6008063,6012166-6012678 28 8.6
02_05_0877 + 32403363-32404662,32406545-32406630,32406709-324070... 28 8.6
01_01_0136 + 1237623-1237820,1238313-1239001,1239978-1240308,124... 28 8.6
>02_04_0451 +
23021139-23021269,23021366-23021498,23021594-23021789,
23023376-23023737,23024049-23024363
Length = 378
Score = 33.9 bits (74), Expect = 0.17
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +2
Query: 110 PKHRSP*RAFSSSNGTLYPSIESCCSSTDSRSPFDSTCRSYCSRRPRGTFFVYT-CF 277
P+ +P R FSS N L P S SR T + +PRG FF ++ C+
Sbjct: 322 PEPLAPPRTFSSENAILPPESPGTSSLMASRGDLGDTPKGKMEDKPRGFFFCFSQCY 378
>06_03_0905 + 25843547-25844314
Length = 255
Score = 31.9 bits (69), Expect = 0.70
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 678 PVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVH-TASLYHATPLV 830
PV + P V + PVV P+ + P V + P+V PV + T + + TP V
Sbjct: 100 PVTYPTPPVTTPPVVVGPPVTYPTPPVTTPPVVVGPPVTYPTPPVTYPTPPV 151
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVV 794
+ P + + PVV PV + P + + PVV P+ + P V
Sbjct: 103 YPTPPVTTPPVVVGPPVTYPTPPVTTPPVVVGPPVTYPTPPV 144
>09_01_0025 - 441528-444284
Length = 918
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +3
Query: 672 SAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHS-LLSC 848
S LHS S + +H +H S P H+ S ATPLVH LL+
Sbjct: 170 SYATLHSTAAPLSAVQTLTHGFMHPGHRIHHLAATSSCPPPHSHSPAAATPLVHGFLLAA 229
Query: 849 TPYTLH 866
T Y+++
Sbjct: 230 TTYSVN 235
>07_01_0408 -
3137705-3138017,3139361-3139371,3140693-3140770,
3141105-3141206,3141309-3141380,3141484-3141558
Length = 216
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +3
Query: 180 AAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAA 335
AA + H P+I+ A P AA + +H PV++ +P A AA
Sbjct: 9 AAAIAPHLVPVIRGATPFAPAAATAAAISLHLVPVIRGATPFSSAVAAAAAA 60
>07_01_0250 -
1864990-1865005,1865429-1865502,1865588-1865659,
1865854-1865920,1866365-1866429,1866812-1866843,
1867250-1867326,1867445-1867646,1867733-1867859
Length = 243
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +3
Query: 681 VLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVV 794
VLH A V T VV + ++HS V+ +V SG VV
Sbjct: 60 VLHRAASVDPTAVVEAGAVVHSGAVLGKDVVVGSGAVV 97
>03_06_0245 - 32619410-32619510,32619698-32620668,32620694-32621169
Length = 515
Score = 29.9 bits (64), Expect = 2.8
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 112 WEDTAWPWPSSITPPWQIAK 53
W+D WPSS + PW++ K
Sbjct: 227 WQDVLLLWPSSSSSPWELTK 246
>06_01_0318 -
2284481-2284594,2285340-2286044,2286589-2286609,
2287186-2287257,2287762-2287842,2288059-2288133,
2288197-2288484
Length = 451
Score = 29.5 bits (63), Expect = 3.7
Identities = 22/79 (27%), Positives = 30/79 (37%)
Frame = -2
Query: 441 GTCDRRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQRGARLEHVAQG*SVGLLAKHVYT 262
G C R PRR R+HD DRS R + + H + +
Sbjct: 272 GECAR--SSPRRRRSRSHERDHDSERDRSDRDRGRHKDREHDRHAREDRDRDYRRSSYSS 329
Query: 261 KNVPRGRREQ*DRHVESKG 205
+NV R RE+ DR + G
Sbjct: 330 RNVDRQGRERRDRDSDRHG 348
>05_01_0488 - 4070506-4072277,4072455-4072557
Length = 624
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -2
Query: 843 RGVSVQEEWRGTETLCGQRGRSELGERSEPRERSELGERSEPQGLNELQGQSEALE 676
RG E + C SEL E E ++ S++ S + L+E++ + EALE
Sbjct: 193 RGKLDASEEKNMRCHCNFGANSELSEHEEKQQVSDVETSSLQKDLDEVKSEKEALE 248
>03_06_0572 +
34812203-34812278,34812485-34813768,34813973-34814049,
34814299-34814646
Length = 594
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 355 TPIMSKIMLPRSMSSHIPSRIPTPAITSPNTKP 453
TP M+ + P +M S + + TPA+T+P T P
Sbjct: 315 TPFMNPVTAP-TMPSPVTNPATTPAVTNPTTMP 346
>02_03_0167 - 15923872-15925683
Length = 603
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = -3
Query: 428 AGVGILDGI*ELILRGSMIFDMIGVFDGNWNRSVVHDWSMLHRAEVL--DYWRSMYIRRM 255
AG+ +L+ + +++RGS + +FDG N+SVV W+ L +L DY +
Sbjct: 187 AGLPVLNSVLTMLVRGSHLDAARLLFDGICNKSVV-TWTALASGYLLRGDYLEVFDLFNR 245
Query: 254 FHGGGVN 234
G G N
Sbjct: 246 MRGVGKN 252
>02_01_0302 - 2021221-2023305
Length = 694
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 672 SAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAP 770
+ P HS P H+TP S P +AP HS P
Sbjct: 502 TTPSYHSPPQGHTTPSHPSPPSSSTAPPSHSPP 534
>10_08_0738 -
20212220-20212282,20212387-20212593,20212690-20212819,
20212919-20213089,20213311-20213433,20213517-20213618,
20214123-20214880
Length = 517
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 109 EDTAWPWPSSITPPWQIAKIEQTTAIL 29
E WP P S PP ++ K EQT ++
Sbjct: 136 EAARWPPPPSFQPPIEVIKAEQTAPLI 162
>04_04_0512 + 25806599-25808080
Length = 493
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/47 (21%), Positives = 24/47 (51%)
Frame = +3
Query: 336 IPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHETRDGDVVKG 476
+P V +S+ + +HA ++ P GD +++H++ + + G
Sbjct: 392 LPEYVSNSEELSNHATFNHKVEEDSSSPAAGDRENEHDSSNSATIDG 438
>04_01_0471 + 6099768-6100094,6100384-6100416
Length = 119
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +2
Query: 44 LLDFGYLPRWCYRRGPRPC-CVFPKHR 121
+L+F +LPR RRG R C V P H+
Sbjct: 67 VLNFAFLPRTSLRRGARACRIVVPHHK 93
>03_01_0270 -
2085461-2086205,2086260-2086339,2086598-2086690,
2086774-2086881,2087012-2087101,2087234-2087275,
2087516-2087587,2090848-2090985,2091074-2092624
Length = 972
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Frame = -2
Query: 417 DPRRNMRTHTSREH-DLRHDRSV----RRQLESQRG 325
+PR R TSR+H RHDRSV R Q S RG
Sbjct: 292 EPRSKRRRSTSRDHYQERHDRSVSPSSREQRHSYRG 327
>02_02_0315 +
8872199-8872815,8873141-8873243,8873346-8873405,
8873558-8873632,8873718-8873792,8873876-8873956,
8874466-8874657,8874762-8874947,8875047-8875094
Length = 478
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +3
Query: 165 PVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSPVQHAP 317
P ++ AAP AAP A AAPVE +S A SP + P
Sbjct: 353 PAITEAAPATAEAAPAAATATAAPPAAPVEETSTEAAPAEPTPLSPYTNYP 403
>01_06_0102 - 26447286-26448107,26448248-26448385,26448990-26449359,
26449505-26449606,26449696-26449788,26449934-26450181,
26451088-26451274,26451825-26452043,26452464-26452660,
26453545-26453875,26454099-26454457,26455141-26455240,
26455349-26455464,26455547-26455663,26455782-26455880,
26456057-26456131,26456205-26456286,26457724-26457763,
26458685-26458769,26458924-26459055
Length = 1303
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = +3
Query: 675 APVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGP 788
AP+ P+V TP+V P+ +AP P
Sbjct: 1141 APMAQDTPMVQGTPMVQGTPMAEGTTGAQAAPTAQGAP 1178
>11_01_0344 + 2558950-2558971,2560389-2560465,2560543-2560833
Length = 129
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = -3
Query: 290 LDYWRSMYIRRMFHGGGV----NNRTGMLNQRGCVSQYWSSMTQYWGIMCRCLMRR 135
LD+WR +RR+ G V G+L Q G + + Q G +CRCL R
Sbjct: 32 LDWWRCARVRRLSVRGDVADADGGEDGVLGQAGGARLHGAIRVQD-GEVCRCLQLR 86
>04_04_0776 -
28000220-28000337,28000760-28000872,28001194-28001289,
28001647-28001763,28002136-28002267,28002348-28002524,
28002660-28002837,28003270-28003373,28003922-28003996
Length = 369
Score = 28.7 bits (61), Expect = 6.5
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 9 RHLNMFFKIAVVCSILAICQGGVI 80
RH+ + + A VC +A+C+GG +
Sbjct: 22 RHVQILKRSAAVCGAVAVCRGGAV 45
>01_01_0539 +
3952039-3952219,3952295-3952984,3953115-3953191,
3953356-3953931
Length = 507
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/92 (23%), Positives = 30/92 (32%)
Frame = +3
Query: 81 DEGHGHAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHS 260
DE H + R PS TP L + Q AGP ++ A
Sbjct: 309 DEVKSHLQKYRLHTRRPMPSPAPPTAATPQLVVLGGIWVPPEYATQAAGPAIYGAHPATQ 368
Query: 261 SYIHASPVVQHFSPVQHAPVVHHAAIPIAVEH 356
+ A+ Q + H + HH A V H
Sbjct: 369 PHYTAAVAAQEYYHHHHHHLQHHPAAAALVHH 400
>12_02_1265 - 27435096-27437675
Length = 859
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -3
Query: 251 HGGGVNNRTGMLNQRGCVSQYWSSMTQY-WGIMCRCLMRRLVMANDALGRHSMAVALVYN 75
HGGG + L V QY+ ++ Q WG M ++ L DA + + + L+++
Sbjct: 287 HGGGPQSNLRSLKSLRSVEQYYHTLQQMKWGPMTEHVLDNLHCKIDAF-QANQVLKLLHD 345
Query: 74 TTLA 63
T+A
Sbjct: 346 HTIA 349
>10_01_0270 - 2876907-2877547,2877838-2878012
Length = 271
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Frame = +3
Query: 174 SHAAPVLTHAAP-LIQHAGPIVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAV 350
S AP H P H P V++ P +Y H +PV + P P+ H A V
Sbjct: 174 SPPAPAAYHKPPPSYTHPAPPVYSYPTP--AYSHPTPVYKQPLPTPSPPIYHPPAEEKKV 231
Query: 351 EHSDHVE 371
D E
Sbjct: 232 AMQDDAE 238
>09_02_0226 - 6007656-6008063,6012166-6012678
Length = 306
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 861 ACTACTRGVSVQEEWRGTETLCGQRGRSELG 769
AC C + ++V+ +WR E CG+R G
Sbjct: 240 ACRKCGKPLAVRGDWRTHEKNCGRRWHCACG 270
>02_05_0877 +
32403363-32404662,32406545-32406630,32406709-32407077,
32407174-32407257,32407362-32407784,32408368-32408434,
32409238-32409430,32409577-32409680,32409787-32409990,
32410174-32410427,32410511-32410735,32410812-32411033,
32411109-32411162,32411337-32411402,32411496-32411633,
32411979-32412032,32412334-32412393,32412975-32413340,
32413415-32413582
Length = 1478
Score = 28.3 bits (60), Expect = 8.6
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Frame = -2
Query: 855 TACTRGVSVQEEWRGTETLCGQRGRSELGERSEPRERSELGERSEPQGLNEL-----QGQ 691
TA T V+V E T + G G + + E ERSE E+S QG++E+ G
Sbjct: 137 TAETFDVAVAE----TSSYLGLGGEERVSNK-EHSERSERSEQSVEQGIHEVIVRQFVGN 191
Query: 690 SEALEQSESQG 658
E EQS QG
Sbjct: 192 KERGEQSVEQG 202
>01_01_0136 +
1237623-1237820,1238313-1239001,1239978-1240308,
1240614-1241351
Length = 651
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +2
Query: 167 SIESCCSSTDSRSPFDSTCRSYCSRRPRG--TFFVYTCFASSPTLQPCATCSSRAPRC 334
++ S C+ D+ +T + C+ P G ++ VY A PCA CS P C
Sbjct: 430 AVYSHCAELDA---IVATAKVPCAHAPYGCSSYVVYAGVADHQRACPCAPCSCPEPGC 484
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,539,084
Number of Sequences: 37544
Number of extensions: 574782
Number of successful extensions: 2242
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2231
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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