Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0093
(880 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ564970-1|CAD92441.1| 106|Homo sapiens protocadherin protein. 48 4e-05
AJ564969-1|CAD92440.1| 222|Homo sapiens protocadherin protein. 48 4e-05
AF332217-1|AAK13469.1| 1340|Homo sapiens protocadherin 11 protein. 48 4e-05
AY861434-1|AAX56124.1| 1329|Homo sapiens protocadherin 11X isofo... 45 3e-04
AY861433-1|AAX56123.1| 1310|Homo sapiens protocadherin 11X isofo... 45 3e-04
AY861432-1|AAX56122.1| 1339|Homo sapiens protocadherin 11X isofo... 45 3e-04
AL133321-2|CAI41436.1| 1337|Homo sapiens protocadherin 11 X-link... 45 3e-04
AL133321-1|CAI41435.1| 1347|Homo sapiens protocadherin 11 X-link... 45 3e-04
AL133274-3|CAI41631.1| 1337|Homo sapiens protocadherin 11 X-link... 45 3e-04
AL133274-2|CAI41629.1| 1310|Homo sapiens protocadherin 11 X-link... 45 3e-04
AL133274-1|CAI41630.1| 1347|Homo sapiens protocadherin 11 X-link... 45 3e-04
AL121869-5|CAI41414.1| 1337|Homo sapiens protocadherin 11 X-link... 45 3e-04
AL121869-4|CAI41412.1| 1310|Homo sapiens protocadherin 11 X-link... 45 3e-04
AL121869-3|CAI41413.1| 1347|Homo sapiens protocadherin 11 X-link... 45 3e-04
AJ564946-1|CAD92425.1| 177|Homo sapiens protocadherin protein. 45 3e-04
AJ564945-1|CAD92424.1| 224|Homo sapiens protocadherin protein. 45 3e-04
AF332219-1|AAK13471.1| 1337|Homo sapiens protocadherin 11 protein. 45 3e-04
AF332218-1|AAK13470.1| 1347|Homo sapiens protocadherin 11 protein. 45 3e-04
AF217288-1|AAK82656.1| 1310|Homo sapiens protocadherin-S protein. 45 3e-04
AF206516-1|AAK82655.1| 1347|Homo sapiens protocadherin-S protein. 45 3e-04
AB037747-1|BAA92564.1| 424|Homo sapiens KIAA1326 protein protein. 45 3e-04
AK096940-1|BAC04906.1| 226|Homo sapiens protein ( Homo sapiens ... 41 0.005
AK094959-1|BAC04461.1| 148|Homo sapiens protein ( Homo sapiens ... 40 0.012
BC030644-1|AAH30644.1| 641|Homo sapiens regulatory factor X, 4 ... 33 1.4
BC028582-1|AAH28582.1| 641|Homo sapiens regulatory factor X, 4 ... 33 1.4
AY102009-1|AAM52484.1| 735|Homo sapiens winged-helix transcript... 33 1.4
AL833921-1|CAD38777.1| 480|Homo sapiens hypothetical protein pr... 33 1.4
AK074913-1|BAC11288.1| 592|Homo sapiens protein ( Homo sapiens ... 33 1.4
AF020267-1|AAC26597.1| 223|Homo sapiens myosin-IXb splice varia... 32 2.4
BC024147-1|AAH24147.2| 505|Homo sapiens GPATC8 protein protein. 32 3.2
AY358802-1|AAQ89162.1| 125|Homo sapiens VLGN1945 protein. 32 3.2
AK097452-1|BAC05058.1| 225|Homo sapiens protein ( Homo sapiens ... 32 3.2
AF332192-1|AAK17191.1| 641|Homo sapiens transcription factor NY... 32 3.2
AF160252-1|AAF03681.1| 1089|Homo sapiens KIAA0553 protein protein. 32 3.2
AB195785-1|BAE48238.1| 370|Homo sapiens regulatory factor X4 is... 32 3.2
AB195784-1|BAE48237.1| 390|Homo sapiens regulatory factor X4 is... 32 3.2
AB095366-1|BAE48232.1| 735|Homo sapiens regulatory factor X4, i... 32 3.2
AB095365-1|BAE48231.1| 744|Homo sapiens regulatory factor X4, i... 32 3.2
AB011125-1|BAA25479.2| 1450|Homo sapiens KIAA0553 protein protein. 32 3.2
AY956763-1|AAX38250.1| 422|Homo sapiens heat shock protein 90Bb... 31 5.5
AK056444-1|BAB71184.1| 206|Homo sapiens protein ( Homo sapiens ... 31 5.5
BC033649-1|AAH33649.1| 274|Homo sapiens PRR7 protein protein. 31 7.3
BC032473-1|AAH32473.1| 778|Homo sapiens melanoma antigen family... 31 7.3
BC024233-1|AAH24233.2| 274|Homo sapiens proline rich 7 (synapti... 31 7.3
BC014070-1|AAH14070.1| 834|Homo sapiens melanoma antigen family... 31 7.3
AL929410-2|CAH71561.1| 834|Homo sapiens melanoma antigen family... 31 7.3
AL929410-1|CAH71560.1| 778|Homo sapiens melanoma antigen family... 31 7.3
AL133628-1|CAB63752.1| 476|Homo sapiens hypothetical protein pr... 31 7.3
AK074092-1|BAB84918.1| 521|Homo sapiens FLJ00163 protein protein. 31 7.3
AF300328-1|AAQ14483.1| 778|Homo sapiens MAGE tumor antigen CCF ... 31 7.3
AF258554-1|AAG23757.1| 778|Homo sapiens PP2250 protein. 31 7.3
AF217963-1|AAG09704.1| 778|Homo sapiens NRAGE protein. 31 7.3
AF124440-1|AAD31421.1| 574|Homo sapiens MAGE tumor antigen D1 p... 31 7.3
S85963-1|AAB21608.1| 1243|Homo sapiens hIRS-1 protein. 30 9.6
S62539-1|AAB27175.1| 1242|Homo sapiens insulin receptor substrat... 30 9.6
M55405-1|AAA63772.1| 128|Homo sapiens mucin protein. 30 9.6
BC101478-1|AAI01479.1| 949|Homo sapiens zinc finger, CCHC domai... 30 9.6
BC053895-1|AAH53895.1| 1242|Homo sapiens insulin receptor substr... 30 9.6
AL117532-1|CAB55981.1| 845|Homo sapiens hypothetical protein pr... 30 9.6
AB030243-1|BAB83129.1| 949|Homo sapiens BDG-29 protein. 30 9.6
AB011151-1|BAA25505.2| 910|Homo sapiens KIAA0579 protein protein. 30 9.6
>AJ564970-1|CAD92441.1| 106|Homo sapiens protocadherin protein.
Length = 106
Score = 48.0 bits (109), Expect = 4e-05
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLV 830
HS P+ ++ HS PV + L HS PV + L HS P + ++L+H+ PLV
Sbjct: 3 HSPPLSQASTQHHSPPVTQTIVLCHSPPVTQTIALCHSPPPIQVSALHHSPPLV 56
Score = 46.8 bits (106), Expect = 1e-04
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHSLLSC 848
HS PV + + HS PV + L HS P + + L HS P+V +L+H+ P + C
Sbjct: 15 HSPPVTQTIVLCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQGTALHHSPPSAQASALC 74
Score = 33.1 bits (72), Expect = 1.4
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 126 HDEPSHQA-TAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSP 302
H P QA T H++P ++ VL H+ P+ Q P++ S+ H+ P+VQ +
Sbjct: 3 HSPPLSQASTQHHSPPVTQTI-VLCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQG-TA 60
Query: 303 VQHAP 317
+ H+P
Sbjct: 61 LHHSP 65
>AJ564969-1|CAD92440.1| 222|Homo sapiens protocadherin protein.
Length = 222
Score = 48.0 bits (109), Expect = 4e-05
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLV 830
HS P+ ++ HS PV + L HS PV + L HS P + ++L+H+ PLV
Sbjct: 48 HSPPLSQASTQHHSPPVTQTIVLCHSPPVTQTIALCHSPPPIQVSALHHSPPLV 101
Score = 46.8 bits (106), Expect = 1e-04
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHSLLSC 848
HS PV + + HS PV + L HS P + + L HS P+V +L+H+ P + C
Sbjct: 60 HSPPVTQTIVLCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQGTALHHSPPSAQASALC 119
Score = 35.5 bits (78), Expect = 0.26
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Frame = +3
Query: 96 HAVSSQ---SIVRHDEPSHQA-TAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSS 263
H+ SSQ S + H P QA T H++P ++ VL H+ P+ Q P++ S+
Sbjct: 35 HSSSSQAQASALCHSPPLSQASTQHHSPPVTQTI-VLCHSPPVTQTIALCHSPPPIQVSA 93
Query: 264 YIHASPVVQHFSPVQHAP 317
H+ P+VQ + + H+P
Sbjct: 94 LHHSPPLVQG-TALHHSP 110
>AF332217-1|AAK13469.1| 1340|Homo sapiens protocadherin 11 protein.
Length = 1340
Score = 48.0 bits (109), Expect = 4e-05
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLV 830
HS P+ ++ HS PV + L HS PV + L HS P + ++L+H+ PLV
Sbjct: 1166 HSPPLSQASTQHHSPPVTQTIVLCHSPPVTQTIALCHSPPPIQVSALHHSPPLV 1219
Score = 46.8 bits (106), Expect = 1e-04
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHSLLSC 848
HS PV + + HS PV + L HS P + + L HS P+V +L+H+ P + C
Sbjct: 1178 HSPPVTQTIVLCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQGTALHHSPPSAQASALC 1237
Score = 35.5 bits (78), Expect = 0.26
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Frame = +3
Query: 96 HAVSSQ---SIVRHDEPSHQA-TAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSS 263
H+ SSQ S + H P QA T H++P ++ VL H+ P+ Q P++ S+
Sbjct: 1153 HSSSSQAQASALCHSPPLSQASTQHHSPPVTQTI-VLCHSPPVTQTIALCHSPPPIQVSA 1211
Query: 264 YIHASPVVQHFSPVQHAP 317
H+ P+VQ + + H+P
Sbjct: 1212 LHHSPPLVQG-TALHHSP 1228
>AY861434-1|AAX56124.1| 1329|Homo sapiens protocadherin 11X isoform 6
protein.
Length = 1329
Score = 45.2 bits (102), Expect = 3e-04
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHS 836
HS P+ ++ HS V + L HS PV + L HS P + ++L+H+ PLV +
Sbjct: 1155 HSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQA 1210
Score = 44.4 bits (100), Expect = 6e-04
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHSLLSC 848
HS V + + HS PV + L HS P + + L HS P+V +L+H+ P + C
Sbjct: 1167 HSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQATALHHSPPSAQASALC 1226
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPL 827
HS P + + + HS P+V + L HS P ++ L +S P+ A++ H++PL
Sbjct: 1191 HSPPPIQVSALHHSPPLVQATALHHSPPSAQASALCYSPPLAQAAAISHSSPL 1243
Score = 33.5 bits (73), Expect = 1.0
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +3
Query: 96 HAVSSQ---SIVRHDEPSHQA-TAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSS 263
H+ SSQ S + H P QA T H++P ++ L H+ P+ Q P++ S+
Sbjct: 1142 HSSSSQAQASALCHSPPLSQASTQHHSPRVTQTI-ALCHSPPVTQTIALCHSPPPIQVSA 1200
Query: 264 YIHASPVVQHFSPVQHAP 317
H+ P+VQ + + H+P
Sbjct: 1201 LHHSPPLVQ-ATALHHSP 1217
>AY861433-1|AAX56123.1| 1310|Homo sapiens protocadherin 11X isoform 7
protein.
Length = 1310
Score = 45.2 bits (102), Expect = 3e-04
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHS 836
HS P+ ++ HS V + L HS PV + L HS P + ++L+H+ PLV +
Sbjct: 1136 HSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQA 1191
Score = 44.4 bits (100), Expect = 6e-04
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHSLLSC 848
HS V + + HS PV + L HS P + + L HS P+V +L+H+ P + C
Sbjct: 1148 HSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQATALHHSPPSAQASALC 1207
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPL 827
HS P + + + HS P+V + L HS P ++ L +S P+ A++ H++PL
Sbjct: 1172 HSPPPIQVSALHHSPPLVQATALHHSPPSAQASALCYSPPLAQAAAISHSSPL 1224
Score = 33.5 bits (73), Expect = 1.0
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +3
Query: 96 HAVSSQ---SIVRHDEPSHQA-TAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSS 263
H+ SSQ S + H P QA T H++P ++ L H+ P+ Q P++ S+
Sbjct: 1123 HSSSSQAQASALCHSPPLSQASTQHHSPRVTQTI-ALCHSPPVTQTIALCHSPPPIQVSA 1181
Query: 264 YIHASPVVQHFSPVQHAP 317
H+ P+VQ + + H+P
Sbjct: 1182 LHHSPPLVQ-ATALHHSP 1198
>AY861432-1|AAX56122.1| 1339|Homo sapiens protocadherin 11X isoform 8
protein.
Length = 1339
Score = 45.2 bits (102), Expect = 3e-04
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHS 836
HS P+ ++ HS V + L HS PV + L HS P + ++L+H+ PLV +
Sbjct: 1165 HSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQA 1220
Score = 44.4 bits (100), Expect = 6e-04
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHSLLSC 848
HS V + + HS PV + L HS P + + L HS P+V +L+H+ P + C
Sbjct: 1177 HSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQATALHHSPPSAQASALC 1236
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPL 827
HS P + + + HS P+V + L HS P ++ L +S P+ A++ H++PL
Sbjct: 1201 HSPPPIQVSALHHSPPLVQATALHHSPPSAQASALCYSPPLAQAAAISHSSPL 1253
Score = 33.5 bits (73), Expect = 1.0
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +3
Query: 96 HAVSSQ---SIVRHDEPSHQA-TAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSS 263
H+ SSQ S + H P QA T H++P ++ L H+ P+ Q P++ S+
Sbjct: 1152 HSSSSQAQASALCHSPPLSQASTQHHSPRVTQTI-ALCHSPPVTQTIALCHSPPPIQVSA 1210
Query: 264 YIHASPVVQHFSPVQHAP 317
H+ P+VQ + + H+P
Sbjct: 1211 LHHSPPLVQ-ATALHHSP 1227
>AL133321-2|CAI41436.1| 1337|Homo sapiens protocadherin 11 X-linked
protein.
Length = 1337
Score = 45.2 bits (102), Expect = 3e-04
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHS 836
HS P+ ++ HS V + L HS PV + L HS P + ++L+H+ PLV +
Sbjct: 1163 HSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQA 1218
Score = 44.4 bits (100), Expect = 6e-04
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHSLLSC 848
HS V + + HS PV + L HS P + + L HS P+V +L+H+ P + C
Sbjct: 1175 HSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQATALHHSPPSAQASALC 1234
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPL 827
HS P + + + HS P+V + L HS P ++ L +S P+ A++ H++PL
Sbjct: 1199 HSPPPIQVSALHHSPPLVQATALHHSPPSAQASALCYSPPLAQAAAISHSSPL 1251
Score = 33.5 bits (73), Expect = 1.0
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +3
Query: 96 HAVSSQ---SIVRHDEPSHQA-TAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSS 263
H+ SSQ S + H P QA T H++P ++ L H+ P+ Q P++ S+
Sbjct: 1150 HSSSSQAQASALCHSPPLSQASTQHHSPRVTQTI-ALCHSPPVTQTIALCHSPPPIQVSA 1208
Query: 264 YIHASPVVQHFSPVQHAP 317
H+ P+VQ + + H+P
Sbjct: 1209 LHHSPPLVQ-ATALHHSP 1225
>AL133321-1|CAI41435.1| 1347|Homo sapiens protocadherin 11 X-linked
protein.
Length = 1347
Score = 45.2 bits (102), Expect = 3e-04
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHS 836
HS P+ ++ HS V + L HS PV + L HS P + ++L+H+ PLV +
Sbjct: 1173 HSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQA 1228
Score = 44.4 bits (100), Expect = 6e-04
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHSLLSC 848
HS V + + HS PV + L HS P + + L HS P+V +L+H+ P + C
Sbjct: 1185 HSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQATALHHSPPSAQASALC 1244
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPL 827
HS P + + + HS P+V + L HS P ++ L +S P+ A++ H++PL
Sbjct: 1209 HSPPPIQVSALHHSPPLVQATALHHSPPSAQASALCYSPPLAQAAAISHSSPL 1261
Score = 33.5 bits (73), Expect = 1.0
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +3
Query: 96 HAVSSQ---SIVRHDEPSHQA-TAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSS 263
H+ SSQ S + H P QA T H++P ++ L H+ P+ Q P++ S+
Sbjct: 1160 HSSSSQAQASALCHSPPLSQASTQHHSPRVTQTI-ALCHSPPVTQTIALCHSPPPIQVSA 1218
Query: 264 YIHASPVVQHFSPVQHAP 317
H+ P+VQ + + H+P
Sbjct: 1219 LHHSPPLVQ-ATALHHSP 1235
>AL133274-3|CAI41631.1| 1337|Homo sapiens protocadherin 11 X-linked
protein.
Length = 1337
Score = 45.2 bits (102), Expect = 3e-04
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHS 836
HS P+ ++ HS V + L HS PV + L HS P + ++L+H+ PLV +
Sbjct: 1163 HSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQA 1218
Score = 44.4 bits (100), Expect = 6e-04
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHSLLSC 848
HS V + + HS PV + L HS P + + L HS P+V +L+H+ P + C
Sbjct: 1175 HSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQATALHHSPPSAQASALC 1234
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPL 827
HS P + + + HS P+V + L HS P ++ L +S P+ A++ H++PL
Sbjct: 1199 HSPPPIQVSALHHSPPLVQATALHHSPPSAQASALCYSPPLAQAAAISHSSPL 1251
Score = 33.5 bits (73), Expect = 1.0
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +3
Query: 96 HAVSSQ---SIVRHDEPSHQA-TAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSS 263
H+ SSQ S + H P QA T H++P ++ L H+ P+ Q P++ S+
Sbjct: 1150 HSSSSQAQASALCHSPPLSQASTQHHSPRVTQTI-ALCHSPPVTQTIALCHSPPPIQVSA 1208
Query: 264 YIHASPVVQHFSPVQHAP 317
H+ P+VQ + + H+P
Sbjct: 1209 LHHSPPLVQ-ATALHHSP 1225
>AL133274-2|CAI41629.1| 1310|Homo sapiens protocadherin 11 X-linked
protein.
Length = 1310
Score = 45.2 bits (102), Expect = 3e-04
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHS 836
HS P+ ++ HS V + L HS PV + L HS P + ++L+H+ PLV +
Sbjct: 1136 HSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQA 1191
Score = 44.4 bits (100), Expect = 6e-04
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHSLLSC 848
HS V + + HS PV + L HS P + + L HS P+V +L+H+ P + C
Sbjct: 1148 HSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQATALHHSPPSAQASALC 1207
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPL 827
HS P + + + HS P+V + L HS P ++ L +S P+ A++ H++PL
Sbjct: 1172 HSPPPIQVSALHHSPPLVQATALHHSPPSAQASALCYSPPLAQAAAISHSSPL 1224
Score = 33.5 bits (73), Expect = 1.0
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +3
Query: 96 HAVSSQ---SIVRHDEPSHQA-TAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSS 263
H+ SSQ S + H P QA T H++P ++ L H+ P+ Q P++ S+
Sbjct: 1123 HSSSSQAQASALCHSPPLSQASTQHHSPRVTQTI-ALCHSPPVTQTIALCHSPPPIQVSA 1181
Query: 264 YIHASPVVQHFSPVQHAP 317
H+ P+VQ + + H+P
Sbjct: 1182 LHHSPPLVQ-ATALHHSP 1198
>AL133274-1|CAI41630.1| 1347|Homo sapiens protocadherin 11 X-linked
protein.
Length = 1347
Score = 45.2 bits (102), Expect = 3e-04
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHS 836
HS P+ ++ HS V + L HS PV + L HS P + ++L+H+ PLV +
Sbjct: 1173 HSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQA 1228
Score = 44.4 bits (100), Expect = 6e-04
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHSLLSC 848
HS V + + HS PV + L HS P + + L HS P+V +L+H+ P + C
Sbjct: 1185 HSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQATALHHSPPSAQASALC 1244
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPL 827
HS P + + + HS P+V + L HS P ++ L +S P+ A++ H++PL
Sbjct: 1209 HSPPPIQVSALHHSPPLVQATALHHSPPSAQASALCYSPPLAQAAAISHSSPL 1261
Score = 33.5 bits (73), Expect = 1.0
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +3
Query: 96 HAVSSQ---SIVRHDEPSHQA-TAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSS 263
H+ SSQ S + H P QA T H++P ++ L H+ P+ Q P++ S+
Sbjct: 1160 HSSSSQAQASALCHSPPLSQASTQHHSPRVTQTI-ALCHSPPVTQTIALCHSPPPIQVSA 1218
Query: 264 YIHASPVVQHFSPVQHAP 317
H+ P+VQ + + H+P
Sbjct: 1219 LHHSPPLVQ-ATALHHSP 1235
>AL121869-5|CAI41414.1| 1337|Homo sapiens protocadherin 11 X-linked
protein.
Length = 1337
Score = 45.2 bits (102), Expect = 3e-04
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHS 836
HS P+ ++ HS V + L HS PV + L HS P + ++L+H+ PLV +
Sbjct: 1163 HSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQA 1218
Score = 44.4 bits (100), Expect = 6e-04
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHSLLSC 848
HS V + + HS PV + L HS P + + L HS P+V +L+H+ P + C
Sbjct: 1175 HSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQATALHHSPPSAQASALC 1234
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPL 827
HS P + + + HS P+V + L HS P ++ L +S P+ A++ H++PL
Sbjct: 1199 HSPPPIQVSALHHSPPLVQATALHHSPPSAQASALCYSPPLAQAAAISHSSPL 1251
Score = 33.5 bits (73), Expect = 1.0
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +3
Query: 96 HAVSSQ---SIVRHDEPSHQA-TAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSS 263
H+ SSQ S + H P QA T H++P ++ L H+ P+ Q P++ S+
Sbjct: 1150 HSSSSQAQASALCHSPPLSQASTQHHSPRVTQTI-ALCHSPPVTQTIALCHSPPPIQVSA 1208
Query: 264 YIHASPVVQHFSPVQHAP 317
H+ P+VQ + + H+P
Sbjct: 1209 LHHSPPLVQ-ATALHHSP 1225
>AL121869-4|CAI41412.1| 1310|Homo sapiens protocadherin 11 X-linked
protein.
Length = 1310
Score = 45.2 bits (102), Expect = 3e-04
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHS 836
HS P+ ++ HS V + L HS PV + L HS P + ++L+H+ PLV +
Sbjct: 1136 HSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQA 1191
Score = 44.4 bits (100), Expect = 6e-04
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHSLLSC 848
HS V + + HS PV + L HS P + + L HS P+V +L+H+ P + C
Sbjct: 1148 HSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQATALHHSPPSAQASALC 1207
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPL 827
HS P + + + HS P+V + L HS P ++ L +S P+ A++ H++PL
Sbjct: 1172 HSPPPIQVSALHHSPPLVQATALHHSPPSAQASALCYSPPLAQAAAISHSSPL 1224
Score = 33.5 bits (73), Expect = 1.0
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +3
Query: 96 HAVSSQ---SIVRHDEPSHQA-TAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSS 263
H+ SSQ S + H P QA T H++P ++ L H+ P+ Q P++ S+
Sbjct: 1123 HSSSSQAQASALCHSPPLSQASTQHHSPRVTQTI-ALCHSPPVTQTIALCHSPPPIQVSA 1181
Query: 264 YIHASPVVQHFSPVQHAP 317
H+ P+VQ + + H+P
Sbjct: 1182 LHHSPPLVQ-ATALHHSP 1198
>AL121869-3|CAI41413.1| 1347|Homo sapiens protocadherin 11 X-linked
protein.
Length = 1347
Score = 45.2 bits (102), Expect = 3e-04
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHS 836
HS P+ ++ HS V + L HS PV + L HS P + ++L+H+ PLV +
Sbjct: 1173 HSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQA 1228
Score = 44.4 bits (100), Expect = 6e-04
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHSLLSC 848
HS V + + HS PV + L HS P + + L HS P+V +L+H+ P + C
Sbjct: 1185 HSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQATALHHSPPSAQASALC 1244
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPL 827
HS P + + + HS P+V + L HS P ++ L +S P+ A++ H++PL
Sbjct: 1209 HSPPPIQVSALHHSPPLVQATALHHSPPSAQASALCYSPPLAQAAAISHSSPL 1261
Score = 33.5 bits (73), Expect = 1.0
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +3
Query: 96 HAVSSQ---SIVRHDEPSHQA-TAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSS 263
H+ SSQ S + H P QA T H++P ++ L H+ P+ Q P++ S+
Sbjct: 1160 HSSSSQAQASALCHSPPLSQASTQHHSPRVTQTI-ALCHSPPVTQTIALCHSPPPIQVSA 1218
Query: 264 YIHASPVVQHFSPVQHAP 317
H+ P+VQ + + H+P
Sbjct: 1219 LHHSPPLVQ-ATALHHSP 1235
>AJ564946-1|CAD92425.1| 177|Homo sapiens protocadherin protein.
Length = 177
Score = 45.2 bits (102), Expect = 3e-04
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHS 836
HS P+ ++ HS V + L HS PV + L HS P + ++L+H+ PLV +
Sbjct: 3 HSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQA 58
Score = 44.4 bits (100), Expect = 6e-04
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHSLLSC 848
HS V + + HS PV + L HS P + + L HS P+V +L+H+ P + C
Sbjct: 15 HSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQATALHHSPPSAQASALC 74
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPL 827
HS P + + + HS P+V + L HS P ++ L +S P+ A++ H++PL
Sbjct: 39 HSPPPIQVSALHHSPPLVQATALHHSPPSAQASALCYSPPLAQAAAISHSSPL 91
Score = 31.1 bits (67), Expect = 5.5
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 126 HDEPSHQA-TAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSP 302
H P QA T H++P ++ L H+ P+ Q P++ S+ H+ P+VQ +
Sbjct: 3 HSPPLSQASTQHHSPRVTQTI-ALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQ-ATA 60
Query: 303 VQHAP 317
+ H+P
Sbjct: 61 LHHSP 65
>AJ564945-1|CAD92424.1| 224|Homo sapiens protocadherin protein.
Length = 224
Score = 45.2 bits (102), Expect = 3e-04
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHS 836
HS P+ ++ HS V + L HS PV + L HS P + ++L+H+ PLV +
Sbjct: 50 HSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQA 105
Score = 44.4 bits (100), Expect = 6e-04
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHSLLSC 848
HS V + + HS PV + L HS P + + L HS P+V +L+H+ P + C
Sbjct: 62 HSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQATALHHSPPSAQASALC 121
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPL 827
HS P + + + HS P+V + L HS P ++ L +S P+ A++ H++PL
Sbjct: 86 HSPPPIQVSALHHSPPLVQATALHHSPPSAQASALCYSPPLAQAAAISHSSPL 138
Score = 33.5 bits (73), Expect = 1.0
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +3
Query: 96 HAVSSQ---SIVRHDEPSHQA-TAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSS 263
H+ SSQ S + H P QA T H++P ++ L H+ P+ Q P++ S+
Sbjct: 37 HSSSSQAQASALCHSPPLSQASTQHHSPRVTQTI-ALCHSPPVTQTIALCHSPPPIQVSA 95
Query: 264 YIHASPVVQHFSPVQHAP 317
H+ P+VQ + + H+P
Sbjct: 96 LHHSPPLVQ-ATALHHSP 112
>AF332219-1|AAK13471.1| 1337|Homo sapiens protocadherin 11 protein.
Length = 1337
Score = 45.2 bits (102), Expect = 3e-04
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHS 836
HS P+ ++ HS V + L HS PV + L HS P + ++L+H+ PLV +
Sbjct: 1163 HSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQA 1218
Score = 44.4 bits (100), Expect = 6e-04
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHSLLSC 848
HS V + + HS PV + L HS P + + L HS P+V +L+H+ P + C
Sbjct: 1175 HSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQATALHHSPPSAQASALC 1234
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPL 827
HS P + + + HS P+V + L HS P ++ L +S P+ A++ H++PL
Sbjct: 1199 HSPPPIQVSALHHSPPLVQATALHHSPPSAQASALCYSPPLAQAAAISHSSPL 1251
Score = 33.5 bits (73), Expect = 1.0
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +3
Query: 96 HAVSSQ---SIVRHDEPSHQA-TAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSS 263
H+ SSQ S + H P QA T H++P ++ L H+ P+ Q P++ S+
Sbjct: 1150 HSSSSQAQASALCHSPPLSQASTQHHSPRVTQTI-ALCHSPPVTQTIALCHSPPPIQVSA 1208
Query: 264 YIHASPVVQHFSPVQHAP 317
H+ P+VQ + + H+P
Sbjct: 1209 LHHSPPLVQ-ATALHHSP 1225
>AF332218-1|AAK13470.1| 1347|Homo sapiens protocadherin 11 protein.
Length = 1347
Score = 45.2 bits (102), Expect = 3e-04
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHS 836
HS P+ ++ HS V + L HS PV + L HS P + ++L+H+ PLV +
Sbjct: 1173 HSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQA 1228
Score = 44.4 bits (100), Expect = 6e-04
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHSLLSC 848
HS V + + HS PV + L HS P + + L HS P+V +L+H+ P + C
Sbjct: 1185 HSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQATALHHSPPSAQASALC 1244
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPL 827
HS P + + + HS P+V + L HS P ++ L +S P+ A++ H++PL
Sbjct: 1209 HSPPPIQVSALHHSPPLVQATALHHSPPSAQASALCYSPPLAQAAAISHSSPL 1261
Score = 33.5 bits (73), Expect = 1.0
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +3
Query: 96 HAVSSQ---SIVRHDEPSHQA-TAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSS 263
H+ SSQ S + H P QA T H++P ++ L H+ P+ Q P++ S+
Sbjct: 1160 HSSSSQAQASALCHSPPLSQASTQHHSPRVTQTI-ALCHSPPVTQTIALCHSPPPIQVSA 1218
Query: 264 YIHASPVVQHFSPVQHAP 317
H+ P+VQ + + H+P
Sbjct: 1219 LHHSPPLVQ-ATALHHSP 1235
>AF217288-1|AAK82656.1| 1310|Homo sapiens protocadherin-S protein.
Length = 1310
Score = 45.2 bits (102), Expect = 3e-04
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHS 836
HS P+ ++ HS V + L HS PV + L HS P + ++L+H+ PLV +
Sbjct: 1136 HSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQA 1191
Score = 44.4 bits (100), Expect = 6e-04
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHSLLSC 848
HS V + + HS PV + L HS P + + L HS P+V +L+H+ P + C
Sbjct: 1148 HSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQATALHHSPPSAQASALC 1207
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPL 827
HS P + + + HS P+V + L HS P ++ L +S P+ A++ H++PL
Sbjct: 1172 HSPPPIQVSALHHSPPLVQATALHHSPPSAQASALCYSPPLAQAAAISHSSPL 1224
Score = 33.5 bits (73), Expect = 1.0
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +3
Query: 96 HAVSSQ---SIVRHDEPSHQA-TAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSS 263
H+ SSQ S + H P QA T H++P ++ L H+ P+ Q P++ S+
Sbjct: 1123 HSSSSQAQASALCHSPPLSQASTQHHSPRVTQTI-ALCHSPPVTQTIALCHSPPPIQVSA 1181
Query: 264 YIHASPVVQHFSPVQHAP 317
H+ P+VQ + + H+P
Sbjct: 1182 LHHSPPLVQ-ATALHHSP 1198
>AF206516-1|AAK82655.1| 1347|Homo sapiens protocadherin-S protein.
Length = 1347
Score = 45.2 bits (102), Expect = 3e-04
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHS 836
HS P+ ++ HS V + L HS PV + L HS P + ++L+H+ PLV +
Sbjct: 1173 HSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQA 1228
Score = 44.4 bits (100), Expect = 6e-04
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHSLLSC 848
HS V + + HS PV + L HS P + + L HS P+V +L+H+ P + C
Sbjct: 1185 HSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQATALHHSPPSAQASALC 1244
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPL 827
HS P + + + HS P+V + L HS P ++ L +S P+ A++ H++PL
Sbjct: 1209 HSPPPIQVSALHHSPPLVQATALHHSPPSAQASALCYSPPLAQAAAISHSSPL 1261
Score = 33.5 bits (73), Expect = 1.0
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +3
Query: 96 HAVSSQ---SIVRHDEPSHQA-TAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSS 263
H+ SSQ S + H P QA T H++P ++ L H+ P+ Q P++ S+
Sbjct: 1160 HSSSSQAQASALCHSPPLSQASTQHHSPRVTQTI-ALCHSPPVTQTIALCHSPPPIQVSA 1218
Query: 264 YIHASPVVQHFSPVQHAP 317
H+ P+VQ + + H+P
Sbjct: 1219 LHHSPPLVQ-ATALHHSP 1235
>AB037747-1|BAA92564.1| 424|Homo sapiens KIAA1326 protein protein.
Length = 424
Score = 45.2 bits (102), Expect = 3e-04
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHS 836
HS P+ ++ HS V + L HS PV + L HS P + ++L+H+ PLV +
Sbjct: 250 HSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQA 305
Score = 44.4 bits (100), Expect = 6e-04
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHSLLSC 848
HS V + + HS PV + L HS P + + L HS P+V +L+H+ P + C
Sbjct: 262 HSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQATALHHSPPSAQASALC 321
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPL 827
HS P + + + HS P+V + L HS P ++ L +S P+ A++ H++PL
Sbjct: 286 HSPPPIQVSALHHSPPLVQATALHHSPPSAQASALCYSPPLAQAAAISHSSPL 338
Score = 33.5 bits (73), Expect = 1.0
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +3
Query: 96 HAVSSQ---SIVRHDEPSHQA-TAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSS 263
H+ SSQ S + H P QA T H++P ++ L H+ P+ Q P++ S+
Sbjct: 237 HSSSSQAQASALCHSPPLSQASTQHHSPRVTQTI-ALCHSPPVTQTIALCHSPPPIQVSA 295
Query: 264 YIHASPVVQHFSPVQHAP 317
H+ P+VQ + + H+P
Sbjct: 296 LHHSPPLVQ-ATALHHSP 312
>AK096940-1|BAC04906.1| 226|Homo sapiens protein ( Homo sapiens
cDNA FLJ39621 fis, clone SMINT2001158. ).
Length = 226
Score = 41.1 bits (92), Expect = 0.005
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHSLLSC 848
H++ H H+ P+ H PL H+ H+ L HS +HT H PL H+
Sbjct: 142 HTSTHTHPLTFTHTYPITH--PLTHTPTHTHTHALTHSHTHIHTHMHSHTHPLTHTSTHT 199
Query: 849 TPYT 860
P+T
Sbjct: 200 HPHT 203
Score = 37.9 bits (84), Expect = 0.048
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPL----VHSGPVVHTASLYHATPLVHS 836
H P+ H+ P+ + H+ PL HS P+ H+ PL +H+ P H ++ H PL +
Sbjct: 13 HPHPLSHTHPLTLTHIHSHTHPLTHSHPLSHTYPLTLTHIHTHPHTHIST--HTHPLTVT 70
Query: 837 LLSCTPYTLHQHT 875
++ T H H+
Sbjct: 71 HITHTHLLTHIHS 83
Score = 34.3 bits (75), Expect = 0.59
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +3
Query: 669 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHSLLSC 848
HS H H++ H H+ P+ H PL H+ HT +L H+ +H+ +
Sbjct: 130 HSHTHAHKHTYTHTSTHTHPLTFTHTYPITH--PLTHTPTHTHTHALTHSHTHIHTHMHS 187
Query: 849 TPYTLHQHTT 878
+ L HT+
Sbjct: 188 HTHPL-THTS 196
>AK094959-1|BAC04461.1| 148|Homo sapiens protein ( Homo sapiens
cDNA FLJ37640 fis, clone BRHIP1000174. ).
Length = 148
Score = 39.9 bits (89), Expect = 0.012
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +3
Query: 666 IHSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHSLLS 845
+ S+PV+H H P+ + L+ S+PV+H H P+ T +L ++P +H +
Sbjct: 71 VSSSPVIHEVQCCHH-PLGSTMTLVSSSPVIHEVQCCHH-PLGSTITLVSSSPRIHEVQC 128
Query: 846 C-TPYTLHQH 872
C +P T H
Sbjct: 129 CLSPSTSIHH 138
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +3
Query: 684 LHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHSLLSC 848
+H + H P+ + L+ S+PV+H H P+ T +L ++P++H + C
Sbjct: 54 IHESQCCHH-PLGSTITLVSSSPVIHEVQCCHH-PLGSTMTLVSSSPVIHEVQCC 106
>BC030644-1|AAH30644.1| 641|Homo sapiens regulatory factor X, 4
(influences HLA class II expression) protein.
Length = 641
Score = 33.1 bits (72), Expect = 1.4
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +3
Query: 681 VLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPL 827
++ S P +H TPV P + SA +++P VHS +++ +Y TPL
Sbjct: 565 LMSSTPRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMY--TPL 611
>BC028582-1|AAH28582.1| 641|Homo sapiens regulatory factor X, 4
(influences HLA class II expression) protein.
Length = 641
Score = 33.1 bits (72), Expect = 1.4
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +3
Query: 681 VLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPL 827
++ S P +H TPV P + SA +++P VHS +++ +Y TPL
Sbjct: 565 LMSSTPRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMY--TPL 611
>AY102009-1|AAM52484.1| 735|Homo sapiens winged-helix transcription
factor RFX4 variant 3 protein.
Length = 735
Score = 33.1 bits (72), Expect = 1.4
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +3
Query: 681 VLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPL 827
++ S P +H TPV P + SA +++P VHS +++ +Y TPL
Sbjct: 659 LMSSTPRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMY--TPL 705
>AL833921-1|CAD38777.1| 480|Homo sapiens hypothetical protein
protein.
Length = 480
Score = 33.1 bits (72), Expect = 1.4
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +3
Query: 681 VLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPL 827
++ S P +H TPV P + SA +++P VHS +++ +Y TPL
Sbjct: 404 LMSSTPRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMY--TPL 450
>AK074913-1|BAC11288.1| 592|Homo sapiens protein ( Homo sapiens
cDNA FLJ90432 fis, clone NT2RP3000677, weakly similar to
DNA BINDING PROTEIN RFX2. ).
Length = 592
Score = 33.1 bits (72), Expect = 1.4
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +3
Query: 681 VLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPL 827
++ S P +H TPV P + SA +++P VHS +++ +Y TPL
Sbjct: 516 LMSSTPRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMY--TPL 562
>AF020267-1|AAC26597.1| 223|Homo sapiens myosin-IXb splice variant
protein.
Length = 223
Score = 32.3 bits (70), Expect = 2.4
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +1
Query: 313 LQSCTTLRFQLPSNTPIMS--KIMLPRSMSSHIPSRIP 420
L S T+R + P TPIMS I LP + SH+P P
Sbjct: 110 LSSFVTVRVKTPRRTPIMSTANIKLPPGLPSHLPRWAP 147
>BC024147-1|AAH24147.2| 505|Homo sapiens GPATC8 protein protein.
Length = 505
Score = 31.9 bits (69), Expect = 3.2
Identities = 32/99 (32%), Positives = 42/99 (42%), Gaps = 7/99 (7%)
Frame = +3
Query: 135 PSHQATAHYTPVLS--HAAPVLTHAAPLI---QHAGPIVHAAPVEHSSYIHASPVVQHFS 299
P+ A A TP L H T +A I QHA HAA + IH P Q +
Sbjct: 347 PASAALAPATPALQPIHIQQPATASATSITTVQHAILQHHAAAAAAAIGIHPHPHPQPLA 406
Query: 300 PVQHAPVVHHAAIPIAVEHSDH--VEDHAPAKYEFSYSV 410
V H P H PI++ H H + H PA + S+ +
Sbjct: 407 QVHHIPQPH--LTPISLSHLTHSIIPGH-PATFLASHPI 442
>AY358802-1|AAQ89162.1| 125|Homo sapiens VLGN1945 protein.
Length = 125
Score = 31.9 bits (69), Expect = 3.2
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +3
Query: 126 HDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGP-IVHAAPVEHSSYIHASPVVQHFSP 302
H S H+ P+L H P+L + PL+ P +V+ P+ +H P + HF P
Sbjct: 9 HPVSSLPLLVHFLPLLVHFLPLLVYLLPLLGRFLPRLVYLLPL----LVHFLPPLMHFLP 64
Query: 303 V 305
+
Sbjct: 65 L 65
>AK097452-1|BAC05058.1| 225|Homo sapiens protein ( Homo sapiens
cDNA FLJ40133 fis, clone TESTI2012231. ).
Length = 225
Score = 31.9 bits (69), Expect = 3.2
Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 2/120 (1%)
Frame = +3
Query: 96 HAVSSQSIVRHDEPSHQATAHYTPVL-SHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIH 272
H + +Q I H H T H T SH + TH H H H+++I+
Sbjct: 10 HTIHTQHITYHSHNPHSPTIHNTHTHHSHTHTIWTH------HT----HTT---HTTHIN 56
Query: 273 ASPVVQHFSPVQHAPVVH-HAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHE 449
+ H + H P+ H P+ H+ H+ ++ HT H +QH+
Sbjct: 57 SYKAFTHTT---HTPLTSTHLHTPLTHTPRTHITHHSQTQHTLLIHQSYTHTPTHHTQHK 113
>AF332192-1|AAK17191.1| 641|Homo sapiens transcription factor
NYD-sp10 protein.
Length = 641
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +3
Query: 681 VLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPL 827
++ S P +H TPV P + SA ++ P VHS +++ +Y TPL
Sbjct: 565 LMSSTPRLHPTPVTPRWPEVPSANTCYTNPSVHSARYGNSSDMY--TPL 611
>AF160252-1|AAF03681.1| 1089|Homo sapiens KIAA0553 protein protein.
Length = 1089
Score = 31.9 bits (69), Expect = 3.2
Identities = 32/99 (32%), Positives = 42/99 (42%), Gaps = 7/99 (7%)
Frame = +3
Query: 135 PSHQATAHYTPVLS--HAAPVLTHAAPLI---QHAGPIVHAAPVEHSSYIHASPVVQHFS 299
P+ A A TP L H T +A I QHA HAA + IH P Q +
Sbjct: 931 PASAALAPATPALQPIHIQQPATASATSITTVQHAILQHHAAAAAAAIGIHPHPHPQPLA 990
Query: 300 PVQHAPVVHHAAIPIAVEHSDH--VEDHAPAKYEFSYSV 410
V H P H PI++ H H + H PA + S+ +
Sbjct: 991 QVHHIPQPH--LTPISLSHLTHSIIPGH-PATFLASHPI 1026
>AB195785-1|BAE48238.1| 370|Homo sapiens regulatory factor X4
isoform F protein.
Length = 370
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +3
Query: 681 VLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPL 827
++ S P +H TPV P + SA ++ P VHS +++ +Y TPL
Sbjct: 294 LMSSTPRLHPTPVTPRWPEVPSANTCYTNPSVHSARYGNSSDMY--TPL 340
>AB195784-1|BAE48237.1| 390|Homo sapiens regulatory factor X4
isoform E protein.
Length = 390
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +3
Query: 681 VLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPL 827
++ S P +H TPV P + SA ++ P VHS +++ +Y TPL
Sbjct: 314 LMSSTPRLHPTPVTPRWPEVPSANTCYTNPSVHSARYGNSSDMY--TPL 360
>AB095366-1|BAE48232.1| 735|Homo sapiens regulatory factor X4,
isoform d protein.
Length = 735
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +3
Query: 681 VLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPL 827
++ S P +H TPV P + SA ++ P VHS +++ +Y TPL
Sbjct: 659 LMSSTPRLHPTPVTPRWPEVPSANTCYTNPSVHSARYGNSSDMY--TPL 705
>AB095365-1|BAE48231.1| 744|Homo sapiens regulatory factor X4,
isoform c protein.
Length = 744
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +3
Query: 681 VLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPL 827
++ S P +H TPV P + SA ++ P VHS +++ +Y TPL
Sbjct: 668 LMSSTPRLHPTPVTPRWPEVPSANTCYTNPSVHSARYGNSSDMY--TPL 714
>AB011125-1|BAA25479.2| 1450|Homo sapiens KIAA0553 protein protein.
Length = 1450
Score = 31.9 bits (69), Expect = 3.2
Identities = 32/99 (32%), Positives = 42/99 (42%), Gaps = 7/99 (7%)
Frame = +3
Query: 135 PSHQATAHYTPVLS--HAAPVLTHAAPLI---QHAGPIVHAAPVEHSSYIHASPVVQHFS 299
P+ A A TP L H T +A I QHA HAA + IH P Q +
Sbjct: 1292 PASAALAPATPALQPIHIQQPATASATSITTVQHAILQHHAAAAAAAIGIHPHPHPQPLA 1351
Query: 300 PVQHAPVVHHAAIPIAVEHSDH--VEDHAPAKYEFSYSV 410
V H P H PI++ H H + H PA + S+ +
Sbjct: 1352 QVHHIPQPH--LTPISLSHLTHSIIPGH-PATFLASHPI 1387
>AY956763-1|AAX38250.1| 422|Homo sapiens heat shock protein 90Bb
protein.
Length = 422
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -2
Query: 222 HVESKGLRESVLEQHDSILGYNVPLLDEKARHGERCFGKTQHGRGPR 82
++E ++E V+E+H LGY + L EK R E GK + +G +
Sbjct: 155 YLEEMQVKE-VVEKHSQFLGYPITLYLEKEREKEISDGKAEEEKGEK 200
>AK056444-1|BAB71184.1| 206|Homo sapiens protein ( Homo sapiens
cDNA FLJ31882 fis, clone NT2RP7002841. ).
Length = 206
Score = 31.1 bits (67), Expect = 5.5
Identities = 26/66 (39%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Frame = -2
Query: 867 GAACTACTRGVSVQEEWRGTETL--CG---QRGRSELGERSEPRERSELGERSEPQGLN- 706
G CT G QEE GT+ L CG R++ E RERS LG R + GL
Sbjct: 141 GQVCTGVHVGAKEQEEPGGTQALRSCGIYCLEERTDKASHEECRERSTLG-RPQCTGLTP 199
Query: 705 ELQGQS 688
L G+S
Sbjct: 200 SLAGES 205
>BC033649-1|AAH33649.1| 274|Homo sapiens PRR7 protein protein.
Length = 274
Score = 30.7 bits (66), Expect = 7.3
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +3
Query: 705 HSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATP 824
HS P VH PL+H P + P H+ P H +L H P
Sbjct: 91 HSHPHVHVHPLLHHGP---AQPHAHAHPHPHHHALPHPPP 127
>BC032473-1|AAH32473.1| 778|Homo sapiens melanoma antigen family D,
1 protein.
Length = 778
Score = 30.7 bits (66), Expect = 7.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 696 PVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVV 794
PV PV+ P+I PV+ P+V GPVV
Sbjct: 335 PVAWQNPVIWPNPVIWQNPVIWPNPIVWPGPVV 367
>BC024233-1|AAH24233.2| 274|Homo sapiens proline rich 7 (synaptic)
protein.
Length = 274
Score = 30.7 bits (66), Expect = 7.3
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +3
Query: 705 HSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATP 824
HS P VH PL+H P + P H+ P H +L H P
Sbjct: 91 HSHPHVHVHPLLHHGP---AQPHAHAHPHPHHHALPHPPP 127
>BC014070-1|AAH14070.1| 834|Homo sapiens melanoma antigen family D,
1 protein.
Length = 834
Score = 30.7 bits (66), Expect = 7.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 696 PVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVV 794
PV PV+ P+I PV+ P+V GPVV
Sbjct: 391 PVAWQNPVIWPNPVIWQNPVIWPNPIVWPGPVV 423
>AL929410-2|CAH71561.1| 834|Homo sapiens melanoma antigen family D,
1 protein.
Length = 834
Score = 30.7 bits (66), Expect = 7.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 696 PVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVV 794
PV PV+ P+I PV+ P+V GPVV
Sbjct: 391 PVAWQNPVIWPNPVIWQNPVIWPNPIVWPGPVV 423
>AL929410-1|CAH71560.1| 778|Homo sapiens melanoma antigen family D,
1 protein.
Length = 778
Score = 30.7 bits (66), Expect = 7.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 696 PVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVV 794
PV PV+ P+I PV+ P+V GPVV
Sbjct: 335 PVAWQNPVIWPNPVIWQNPVIWPNPIVWPGPVV 367
>AL133628-1|CAB63752.1| 476|Homo sapiens hypothetical protein
protein.
Length = 476
Score = 30.7 bits (66), Expect = 7.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 696 PVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVV 794
PV PV+ P+I PV+ P+V GPVV
Sbjct: 33 PVAWQNPVIWPNPVIWQNPVIWPNPIVWPGPVV 65
>AK074092-1|BAB84918.1| 521|Homo sapiens FLJ00163 protein protein.
Length = 521
Score = 30.7 bits (66), Expect = 7.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 696 PVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVV 794
PV PV+ P+I PV+ P+V GPVV
Sbjct: 349 PVAWQNPVIWPNPVIWQNPVIWPNPIVWPGPVV 381
>AF300328-1|AAQ14483.1| 778|Homo sapiens MAGE tumor antigen CCF
protein.
Length = 778
Score = 30.7 bits (66), Expect = 7.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 696 PVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVV 794
PV PV+ P+I PV+ P+V GPVV
Sbjct: 335 PVAWQNPVIWPNPVIWQNPVIWPNPIVWPGPVV 367
>AF258554-1|AAG23757.1| 778|Homo sapiens PP2250 protein.
Length = 778
Score = 30.7 bits (66), Expect = 7.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 696 PVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVV 794
PV PV+ P+I PV+ P+V GPVV
Sbjct: 335 PVAWQNPVIWPNPVIWQNPVIWPNPIVWPGPVV 367
>AF217963-1|AAG09704.1| 778|Homo sapiens NRAGE protein.
Length = 778
Score = 30.7 bits (66), Expect = 7.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 696 PVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVV 794
PV PV+ P+I PV+ P+V GPVV
Sbjct: 335 PVAWQNPVIWPNPVIWQNPVIWPNPIVWPGPVV 367
>AF124440-1|AAD31421.1| 574|Homo sapiens MAGE tumor antigen D1
protein.
Length = 574
Score = 30.7 bits (66), Expect = 7.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 696 PVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVV 794
PV PV+ P+I PV+ P+V GPVV
Sbjct: 131 PVAWQNPVIWPNPVIWQNPVIWPNPIVWPGPVV 163
>S85963-1|AAB21608.1| 1243|Homo sapiens hIRS-1 protein.
Length = 1243
Score = 30.3 bits (65), Expect = 9.6
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Frame = +3
Query: 156 HYTPVLSHAAP-VLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSPV--QHAPVVH 326
H++ VL H P V + L+ G ++ +PV S+ +SP ++ P QH PV+
Sbjct: 707 HHSHVLPHPKPPVESSGGKLLPCTGDYMNMSPVGDSNT--SSPSDCYYGPEDPQHKPVLS 764
Query: 327 HAAIPIAVEHS 359
+ ++P + +H+
Sbjct: 765 YYSLPRSFKHT 775
>S62539-1|AAB27175.1| 1242|Homo sapiens insulin receptor substrate-1
protein.
Length = 1242
Score = 30.3 bits (65), Expect = 9.6
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Frame = +3
Query: 156 HYTPVLSHAAP-VLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSPV--QHAPVVH 326
H++ VL H P V + L+ G ++ +PV S+ +SP ++ P QH PV+
Sbjct: 706 HHSHVLPHPKPPVESSGGKLLPCTGDYMNMSPVGDSNT--SSPSDCYYGPEDPQHKPVLS 763
Query: 327 HAAIPIAVEHS 359
+ ++P + +H+
Sbjct: 764 YYSLPRSFKHT 774
>M55405-1|AAA63772.1| 128|Homo sapiens mucin protein.
Length = 128
Score = 30.3 bits (65), Expect = 9.6
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +3
Query: 687 HSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPLVHSLLSCTPYTLH 866
HS P S+ AP S P S+ + + +V T + YH+TP SL++ T T H
Sbjct: 10 HSTPSFTSSITTTEAPS-SSTPSFTSS-ITTTDSIVTTETTYHSTPSFTSLITITETTSH 67
>BC101478-1|AAI01479.1| 949|Homo sapiens zinc finger, CCHC domain
containing 14 protein.
Length = 949
Score = 30.3 bits (65), Expect = 9.6
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = +3
Query: 240 AAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDP 419
A P+ SS + P H PVQ H A + + VE H + E+S S P
Sbjct: 367 APPLVTSSGVARVPPTSHVGPVQSGRGSHAAELRVEVEQPHHQLPREGSSSEYSSSSSSP 426
>BC053895-1|AAH53895.1| 1242|Homo sapiens insulin receptor substrate
1 protein.
Length = 1242
Score = 30.3 bits (65), Expect = 9.6
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Frame = +3
Query: 156 HYTPVLSHAAP-VLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSPV--QHAPVVH 326
H++ VL H P V + L+ G ++ +PV S+ +SP ++ P QH PV+
Sbjct: 706 HHSHVLPHPKPPVESSGGKLLPCTGDYMNMSPVGDSNT--SSPSDCYYGPEDPQHKPVLS 763
Query: 327 HAAIPIAVEHS 359
+ ++P + +H+
Sbjct: 764 YYSLPRSFKHT 774
>AL117532-1|CAB55981.1| 845|Homo sapiens hypothetical protein
protein.
Length = 845
Score = 30.3 bits (65), Expect = 9.6
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = +3
Query: 240 AAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDP 419
A P+ SS + P H PVQ H A + + VE H + E+S S P
Sbjct: 250 APPLVTSSGVARVPPTSHVGPVQSGRGSHAAELRVEVEQPHHQLPREGSSSEYSSSSSSP 309
>AB030243-1|BAB83129.1| 949|Homo sapiens BDG-29 protein.
Length = 949
Score = 30.3 bits (65), Expect = 9.6
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = +3
Query: 240 AAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDP 419
A P+ SS + P H PVQ H A + + VE H + E+S S P
Sbjct: 367 APPLVTSSGVARVPPTSHVGPVQSGRGSHAAELRVEVEQPHHQLPREGSSSEYSSSSSSP 426
>AB011151-1|BAA25505.2| 910|Homo sapiens KIAA0579 protein protein.
Length = 910
Score = 30.3 bits (65), Expect = 9.6
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = +3
Query: 240 AAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDP 419
A P+ SS + P H PVQ H A + + VE H + E+S S P
Sbjct: 328 APPLVTSSGVARVPPTSHVGPVQSGRGSHAAELRVEVEQPHHQLPREGSSSEYSSSSSSP 387
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,048,204
Number of Sequences: 237096
Number of extensions: 3034466
Number of successful extensions: 14060
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 12546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13928
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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