Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0093
(880 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g36150.1 68414.m04494 protease inhibitor/seed storage/lipid t... 38 0.012
At1g21310.1 68414.m02662 proline-rich extensin-like family prote... 35 0.082
At5g27690.1 68418.m03321 heavy-metal-associated domain-containin... 33 0.33
At2g21235.1 68415.m02522 bZIP protein-related similar to VirE2-i... 31 0.77
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 31 1.3
At5g29070.1 68418.m03617 expressed protein 30 1.8
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 30 1.8
At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid t... 30 2.3
At5g41100.2 68418.m04997 expressed protein 29 3.1
At5g41100.1 68418.m04996 expressed protein 29 3.1
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 29 3.1
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 29 3.1
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 29 4.1
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 29 4.1
At5g07520.1 68418.m00861 glycine-rich protein (GRP18) Oleosin; g... 29 5.4
At3g53140.1 68416.m05856 O-diphenol-O-methyl transferase, putati... 29 5.4
At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identic... 28 7.2
At3g10070.1 68416.m01207 transcription initiation factor IID (TF... 28 7.2
At1g76930.2 68414.m08956 proline-rich extensin-like family prote... 28 7.2
At1g76930.1 68414.m08955 proline-rich extensin-like family prote... 28 7.2
At1g30420.1 68414.m03718 ATP-binding cassette transport protein,... 28 7.2
At5g31873.1 68418.m03777 hypothetical protein 28 9.5
At5g28120.1 68418.m03396 hypothetical protein 28 9.5
At5g28110.1 68418.m03395 hypothetical protein 28 9.5
At3g30816.1 68416.m03949 hypothetical protein 28 9.5
At1g28060.1 68414.m03435 small nuclear ribonucleoprotein family ... 28 9.5
>At1g36150.1 68414.m04494 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein low similarity to
glucoamylase S1/S2 [Precursor] from Saccharomyces
cerevisiae [SP|P08640], proteophosphoglycan from
Leishmania major [GI:5420387]; contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 256
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = +3
Query: 120 VRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHA-APVEH-SSYIHASPVVQH 293
VRH P +H +P +SH++P + ++P + H+ P+V A +PV+ SS +SP
Sbjct: 165 VRHSSPP---VSHSSPPVSHSSPPTSRSSPAVSHSSPVVAASSPVKAVSSSTASSPRAAS 221
Query: 294 FSP 302
SP
Sbjct: 222 PSP 224
>At1g21310.1 68414.m02662 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 431
Score = 34.7 bits (76), Expect = 0.082
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Frame = +3
Query: 144 QATAHYTPVLSHAAPVLTHAAPLIQHAGP--IVHAAPV--EHSSYIHASPVVQHFS--PV 305
Q+TA+Y S P + H P ++H P + H+ P +H Y P V+H+S PV
Sbjct: 24 QSTANY--FYSSPPPPVKHYTPPVKHYSPPPVYHSPPPPKKHYEYKSPPPPVKHYSPPPV 81
Query: 306 QHAP 317
H+P
Sbjct: 82 YHSP 85
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Frame = +3
Query: 156 HYTPV-LSHAAP------VLTHAAPLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS- 299
HY+P + H+ P V P ++H P + H+ P Y++ SP V+H+S
Sbjct: 75 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 134
Query: 300 -PVQHAP 317
PV H+P
Sbjct: 135 PPVYHSP 141
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Frame = +3
Query: 156 HYTPV-LSHAAP------VLTHAAPLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS- 299
HY+P + H+ P V P ++H P + H+ P Y++ SP V+H+S
Sbjct: 103 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 162
Query: 300 -PVQHAP 317
PV H+P
Sbjct: 163 PPVYHSP 169
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Frame = +3
Query: 156 HYTPV-LSHAAP------VLTHAAPLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS- 299
HY+P + H+ P V P ++H P + H+ P Y++ SP V+H+S
Sbjct: 131 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 190
Query: 300 -PVQHAP 317
PV H+P
Sbjct: 191 PPVYHSP 197
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Frame = +3
Query: 156 HYTPV-LSHAAP------VLTHAAPLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS- 299
HY+P + H+ P V P ++H P + H+ P Y++ SP V+H+S
Sbjct: 159 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 218
Query: 300 -PVQHAP 317
PV H+P
Sbjct: 219 PPVYHSP 225
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Frame = +3
Query: 156 HYTPV-LSHAAP------VLTHAAPLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS- 299
HY+P + H+ P V P ++H P + H+ P Y++ SP V+H+S
Sbjct: 187 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 246
Query: 300 -PVQHAP 317
PV H+P
Sbjct: 247 PPVYHSP 253
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Frame = +3
Query: 156 HYTPV-LSHAAP------VLTHAAPLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS- 299
HY+P + H+ P V P ++H P + H+ P Y++ SP V+H+S
Sbjct: 215 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 274
Query: 300 -PVQHAP 317
PV H+P
Sbjct: 275 PPVYHSP 281
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Frame = +3
Query: 156 HYTPV-LSHAAP------VLTHAAPLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS- 299
HY+P + H+ P V P ++H P + H+ P Y++ SP V+H+S
Sbjct: 243 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 302
Query: 300 -PVQHAP 317
PV H+P
Sbjct: 303 PPVYHSP 309
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Frame = +3
Query: 156 HYTPV-LSHAAP------VLTHAAPLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS- 299
HY+P + H+ P V P ++H P + H+ P Y++ SP V+H+S
Sbjct: 271 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 330
Query: 300 -PVQHAP 317
PV H+P
Sbjct: 331 PPVYHSP 337
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Frame = +3
Query: 156 HYTPV-LSHAAP------VLTHAAPLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS- 299
HY+P + H+ P V P ++H P + H+ P Y++ SP V+H+S
Sbjct: 299 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 358
Query: 300 -PVQHAP 317
PV H+P
Sbjct: 359 PPVYHSP 365
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Frame = +3
Query: 156 HYTPV-LSHAAP------VLTHAAPLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS- 299
HY+P + H+ P V P ++H P + H+ P Y++ SP V+H+S
Sbjct: 327 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 386
Query: 300 -PVQHAP 317
PV H+P
Sbjct: 387 PPVYHSP 393
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 6/43 (13%)
Frame = +3
Query: 207 PLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS--PVQHAP 317
P ++H P + H+ P Y++ SP V+H+S PV H+P
Sbjct: 71 PPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSP 113
>At5g27690.1 68418.m03321 heavy-metal-associated domain-containing
protein very low similarity to copper homeostasis factor
from Arabidopsis thaliana [gi:3168840]; contains Pfam
heavy metal associated domain PF00403
Length = 352
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 6/73 (8%)
Frame = +3
Query: 666 IHSAP----VLHSAP--VVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPL 827
I+SAP ++H P + H H P +HS P H + GP + S YH P
Sbjct: 214 IYSAPQDHHIIHGPPPHLHHHQQQNHPYPTVHSPPRHHPQQMYGPGPGLPPPSFYHTQPQ 273
Query: 828 VHSLLSCTPYTLH 866
+ + T+H
Sbjct: 274 TAPSYTVSYNTVH 286
>At2g21235.1 68415.m02522 bZIP protein-related similar to
VirE2-interacting protein VIP1 [Arabidopsis thaliana]
GI:7258340, tbZIP transcription factor [Arabidopsis
thaliana] GI:17065884
Length = 550
Score = 31.5 bits (68), Expect = 0.77
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 681 VLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVVHTASLYHATPL 827
++H +PV+ P AP+ S P+V S+P H P H + + PL
Sbjct: 216 LIHRSPVLSVLP---PAPVYSSNPMVRSSPPGHPSPSAHLEEMSNRPPL 261
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +3
Query: 666 IHSAPVLH---SAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGPV 791
IH +PVL APV S P+V S+P H +P H + + P+
Sbjct: 217 IHRSPVLSVLPPAPVYSSNPMVRSSPPGHPSPSAHLEEMSNRPPL 261
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +1
Query: 340 QLPSNTPIMSKIMLPRSMSSHIPSRIPTPAI-----TSPNTKPV 456
Q P+ + S++ P S S+ PS+ PTP + +PN+KPV
Sbjct: 726 QAPTTSSETSQVPTPSSESNQSPSQAPTPILEPVHAPTPNSKPV 769
>At5g29070.1 68418.m03617 expressed protein
Length = 307
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 188 STDSRSPFDST-CRSYCSRRPRGTFFVYTCFASSPTLQPCATCSSRAPR 331
+T R P D T C S RP T T SSPT +P +CS AP+
Sbjct: 93 ATLDRRPTDWTRCGSDTQPRPWATQGATTGPESSPTCRPTGSCSVAAPQ 141
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/52 (40%), Positives = 25/52 (48%)
Frame = -2
Query: 543 RCGGQLCIRPCGWNHQAGVESIRLSRHHHHGFRVGTCDRRCGDPRRNMRTHT 388
RCG C R C H +S S G RV TC ++CG PR + R HT
Sbjct: 720 RCGMHACARTC---HPEPCDSFNESEA---GMRV-TCRQKCGAPRTDCR-HT 763
>At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to auxin
down regulated GB:X69640 GI:296442 from [Glycine max];
contains Pfam profile PF00234: Protease inhibitor/seed
storage/LTP family
Length = 297
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 690 SAPVVHSTPVV-HSAPLIHSAPVVHSAPLVHSGPV 791
S PVV PVV P+I PVV+ P+V P+
Sbjct: 88 SPPVVRPPPVVVRPPPIIRPPPVVYPPPIVRPPPI 122
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 672 SAPVLHSAP-VVHSTPVVHSAPLIHSAPVVHSAPLVHSGPVV 794
S PV+ P VV P++ P+++ P+V P+ P++
Sbjct: 88 SPPVVRPPPVVVRPPPIIRPPPVVYPPPIVRPPPITRP-PII 128
>At5g41100.2 68418.m04997 expressed protein
Length = 582
Score = 29.5 bits (63), Expect = 3.1
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 10/88 (11%)
Frame = +3
Query: 120 VRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFS 299
+R PS A TPV S ++P+ T H+ + H++P+E H +S
Sbjct: 346 MRQMTPSANAYILPTPVDSKSSPIFTKPVTQTNHSANLWHSSPLEPIKTAHKDAESNLYS 405
Query: 300 ----PVQHA------PVVHHAAIPIAVE 353
P +HA P +P+AV+
Sbjct: 406 RLPRPSEHAFSGPLKPSSTRLPVPVAVQ 433
>At5g41100.1 68418.m04996 expressed protein
Length = 586
Score = 29.5 bits (63), Expect = 3.1
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 10/88 (11%)
Frame = +3
Query: 120 VRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFS 299
+R PS A TPV S ++P+ T H+ + H++P+E H +S
Sbjct: 346 MRQMTPSANAYILPTPVDSKSSPIFTKPVTQTNHSANLWHSSPLEPIKTAHKDAESNLYS 405
Query: 300 ----PVQHA------PVVHHAAIPIAVE 353
P +HA P +P+AV+
Sbjct: 406 RLPRPSEHAFSGPLKPSSTRLPVPVAVQ 433
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +3
Query: 195 THAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIP 341
T P H+ P +P Y ++SP H SP H+P H+ P
Sbjct: 535 TRPPPPPPHSPPPPQFSPPPPEPYYYSSPPPPHSSPPPHSPPPPHSPPP 583
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -2
Query: 858 CTACTRGVSVQEEWRGTETLCGQRGRS 778
C C++G +VQ +++ CG RG S
Sbjct: 120 CERCSKGYAVQSDYKAHLKTCGSRGHS 146
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -2
Query: 858 CTACTRGVSVQEEWRGTETLCGQRGRS 778
C C++G +VQ +++ CG RG S
Sbjct: 147 CERCSKGYAVQSDYKAHLKTCGTRGHS 173
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -2
Query: 858 CTACTRGVSVQEEWRGTETLCGQRGRS 778
C C++G +VQ +++ CG RG S
Sbjct: 150 CERCSKGYAVQSDYKAHLKTCGTRGHS 176
>At5g07520.1 68418.m00861 glycine-rich protein (GRP18) Oleosin;
glycine-rich protein 18 (GRP18) PMID:11431566;
Length = 228
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +3
Query: 675 APVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPLVHSGP 788
AP +AP + P +AP +AP +AP + P
Sbjct: 181 APAAEAAPAAGAAPAAGAAPAAGAAPAAGAAPAAGAAP 218
>At3g53140.1 68416.m05856 O-diphenol-O-methyl transferase, putative
similar to GI:6688808 [Medicago sativa subsp. x varia],
caffeic acid O-methyltransferase (homt1), Populus
kitakamiensis, EMBL:PKHOMT1A
Length = 359
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 171 LSHAAPVLTHAAPLIQHAGPIVHAAPVE 254
LS+AA VL H + A P+VH A VE
Sbjct: 115 LSYAAYVLQHHQEALMRAWPLVHTAVVE 142
>At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identical
to gi_11935088_gb_AAG41964
Length = 209
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 355 TPIMSKIMLPRSMSSHIPSRIPTPAITSPNTKPVMVMS*KANTLYSSLMVPS 510
+PI S P + S+ S +PA+TSP T P + A++ S P+
Sbjct: 23 SPISSPTKSPTTPSAPTTSPTKSPAVTSPTTAPAKTPTASASSPVESPKSPA 74
>At3g10070.1 68416.m01207 transcription initiation factor IID
(TFIID) subunit A family protein similar to hypothetical
protein GB:CAB10099 [Schizosaccharomyces pombe];
contains Pfam profile PF03847: Transcription initiation
factor TFIID subunit A
Length = 539
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 1/85 (1%)
Frame = +3
Query: 135 PSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAP-VEHSSYIHASPVVQHFSPVQH 311
P+ + PV S A H + + P ++ P +HSSY H S
Sbjct: 61 PNPNPPQYTRPVTSPATQQQQHLSQPLVRPPPQAYSRPWQQHSSYTHFSSASSPLLSSSS 120
Query: 312 APVVHHAAIPIAVEHSDHVEDHAPA 386
AP +++PI+ + + PA
Sbjct: 121 APASSSSSLPISGQQRGGMAIGVPA 145
>At1g76930.2 68414.m08956 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 256
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Frame = +3
Query: 156 HYTP--VLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSS----YIHASPVVQHFSPVQHAP 317
HY+P V P + H +P + P PV+H S Y P V+H+SP
Sbjct: 108 HYSPPPVYKSPPPPVKHYSPPPVYKSP---PPPVKHYSPPPVYKSPPPPVKHYSPPPSYT 164
Query: 318 VVHH 329
+HH
Sbjct: 165 TLHH 168
>At1g76930.1 68414.m08955 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 293
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Frame = +3
Query: 156 HYTP--VLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSS----YIHASPVVQHFSPVQHAP 317
HY+P V P + H +P + P PV+H S Y P V+H+SP
Sbjct: 108 HYSPPPVYKSPPPPVKHYSPPPVYKSP---PPPVKHYSPPPVYKSPPPPVKHYSPPPSYT 164
Query: 318 VVHH 329
+HH
Sbjct: 165 TLHH 168
>At1g30420.1 68414.m03718 ATP-binding cassette transport protein,
putative contains Pfam profiles PF00005: ABC
transporter, PF00664: ABC transporter transmembrane
region
Length = 1488
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -1
Query: 130 SWRTMLWEDTAWPWPSSITPPWQIAKIEQTTAILKNMLRCLTE 2
SW T L + + P + WQ+ + +QT ++K RC TE
Sbjct: 241 SWMTPLMQ-LGYRKPITERDVWQLDQWDQTETLIKRFQRCWTE 282
>At5g31873.1 68418.m03777 hypothetical protein
Length = 271
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2
Query: 429 RRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQRGARLEHVAQG 298
+R DPR N+R R H L +D V + G+ + HVA G
Sbjct: 196 KRMLDPRANLRPTEERFHGLAYDDPVDESTDPW-GSIVHHVAGG 238
>At5g28120.1 68418.m03396 hypothetical protein
Length = 506
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2
Query: 429 RRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQRGARLEHVAQG 298
+R DPR N+R R H L +D V + G+ + HVA G
Sbjct: 394 KRMLDPRANLRPTEERFHGLAYDDPVDESTDPW-GSIVHHVAGG 436
>At5g28110.1 68418.m03395 hypothetical protein
Length = 493
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2
Query: 429 RRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQRGARLEHVAQG 298
+R DPR N+R R H L +D V + G+ + HVA G
Sbjct: 394 KRMLDPRANLRPTEERFHGLAYDDPVDESTDPW-GSIVHHVAGG 436
>At3g30816.1 68416.m03949 hypothetical protein
Length = 342
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2
Query: 429 RRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQRGARLEHVAQG 298
+R DPR N+R R H L +D V + G+ + HVA G
Sbjct: 231 KRMLDPRANLRPTEERFHGLAYDDPVDESTDPW-GSIVHHVAGG 273
>At1g28060.1 68414.m03435 small nuclear ribonucleoprotein family
protein / snRNP family protein contains similarity to
U4/U6 small nuclear ribonucleoprotein hPrp3 [Homo
sapiens] gi|2708307|gb|AAC51926
Length = 786
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -2
Query: 792 QRGRS-ELGERSEPRERSELGERSEPQGLNELQGQSEALEQSESQG 658
+RGRS E GER R+R + +G E + +S+ ++ E G
Sbjct: 64 RRGRSVERGEREGSRDREKHHHERSHEGSKEKESRSKRKDREEENG 109
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,659,283
Number of Sequences: 28952
Number of extensions: 415698
Number of successful extensions: 1670
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1657
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2067932800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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