Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0092
         (617 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   4.7  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   4.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   6.3  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -3

Query: 99  LIFTSRYIWFYIKLIFMS 46
           L+FTS +I+  + + +MS
Sbjct: 239 LMFTSHFIFIVVSIFYMS 256


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -3

Query: 138 IVTLLILILTASNLIFTS 85
           I+T++IL++   N+I T+
Sbjct: 16  IITIVILVVATGNIIHTT 33


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 18/78 (23%), Positives = 34/78 (43%)
 Frame = +2

Query: 134 TIDRLTHRRGFRKLIYIFFYHTILLLHFGRHTRKRVMYVFHYKNVYLPAVLEPWAWSHRL 313
           T+D      G++ L+  F   + L+LH  +   K  M  F     ++  V   W +   +
Sbjct: 363 TVDLFNSLFGYQTLLITFHIGSQLVLHTVKTVLKTTMSTFS-DITFMRTV---WKF-FNI 417

Query: 314 ILVRAFYLGHDNSNDCKM 367
            L+  FY  ++N+   K+
Sbjct: 418 FLITPFYNFNENTIHSKL 435


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,241
Number of Sequences: 336
Number of extensions: 3072
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)