Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0092
(617 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC017663-1|AAH17663.1| 490|Homo sapiens limb region 1 homolog (... 31 2.5
AF402318-1|AAK94061.1| 490|Homo sapiens differentiation-related... 31 2.5
U38894-1|AAC50714.1| 388|Homo sapiens tyrosine kinase t-Ror1 pr... 29 9.9
M97675-1|AAA60275.1| 937|Homo sapiens transmembrane receptor pr... 29 9.9
BC128386-1|AAI28387.1| 940|Homo sapiens ROR1 protein protein. 29 9.9
AL445205-2|CAH71706.1| 937|Homo sapiens receptor tyrosine kinas... 29 9.9
AL353671-6|CAH71256.1| 195|Homo sapiens tigger transposable ele... 29 9.9
AL161742-2|CAI21932.1| 937|Homo sapiens receptor tyrosine kinas... 29 9.9
AL137859-2|CAI21732.1| 937|Homo sapiens receptor tyrosine kinas... 29 9.9
AK098413-1|BAC05300.1| 195|Homo sapiens subunit. protein. 29 9.9
>BC017663-1|AAH17663.1| 490|Homo sapiens limb region 1 homolog
(mouse) protein.
Length = 490
Score = 31.5 bits (68), Expect = 2.5
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = +1
Query: 193 SHDFIASLWEAYTKTCYVRISLQKCLSACGIGTMGMVASFDTSKSVLSRPRQFQ*LQDAR 372
S + + LWE Y Y ISL CL +G+ F +L +P + L D +
Sbjct: 178 SMESLYDLWEFYLPYLYSCISLMGCLLLLLCTPVGLSRMFTVMGQLLVKPTILEDL-DEQ 236
Query: 373 LYVIT 387
+Y+IT
Sbjct: 237 IYIIT 241
>AF402318-1|AAK94061.1| 490|Homo sapiens differentiation-related
DIF14 long form protein.
Length = 490
Score = 31.5 bits (68), Expect = 2.5
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = +1
Query: 193 SHDFIASLWEAYTKTCYVRISLQKCLSACGIGTMGMVASFDTSKSVLSRPRQFQ*LQDAR 372
S + + LWE Y Y ISL CL +G+ F +L +P + L D +
Sbjct: 178 SMESLYDLWEFYLPYLYSCISLMGCLLLLLCTPVGLSRMFTVMGQLLVKPTILEDL-DEQ 236
Query: 373 LYVIT 387
+Y+IT
Sbjct: 237 IYIIT 241
>U38894-1|AAC50714.1| 388|Homo sapiens tyrosine kinase t-Ror1
protein.
Length = 388
Score = 29.5 bits (63), Expect = 9.9
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 597 TGPSKGSALQNLPPDRKRDPLKRFGENSVGYVYGLIHSSS 478
TGP + +Q+ PP + R P G S G+V L S S
Sbjct: 290 TGPPR--VIQHCPPPKSRSPSSASGSTSTGHVTSLPSSGS 327
>M97675-1|AAA60275.1| 937|Homo sapiens transmembrane receptor
protein.
Length = 937
Score = 29.5 bits (63), Expect = 9.9
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 597 TGPSKGSALQNLPPDRKRDPLKRFGENSVGYVYGLIHSSS 478
TGP + +Q+ PP + R P G S G+V L S S
Sbjct: 839 TGPPR--VIQHCPPPKSRSPSSASGSTSTGHVTSLPSSGS 876
>BC128386-1|AAI28387.1| 940|Homo sapiens ROR1 protein protein.
Length = 940
Score = 29.5 bits (63), Expect = 9.9
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 597 TGPSKGSALQNLPPDRKRDPLKRFGENSVGYVYGLIHSSS 478
TGP + +Q+ PP + R P G S G+V L S S
Sbjct: 842 TGPPR--VIQHCPPPKSRSPSSASGSTSTGHVTSLPSSGS 879
>AL445205-2|CAH71706.1| 937|Homo sapiens receptor tyrosine
kinase-like orphan receptor 1 protein.
Length = 937
Score = 29.5 bits (63), Expect = 9.9
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 597 TGPSKGSALQNLPPDRKRDPLKRFGENSVGYVYGLIHSSS 478
TGP + +Q+ PP + R P G S G+V L S S
Sbjct: 839 TGPPR--VIQHCPPPKSRSPSSASGSTSTGHVTSLPSSGS 876
>AL353671-6|CAH71256.1| 195|Homo sapiens tigger transposable
element derived 1-like 2 protein.
Length = 195
Score = 29.5 bits (63), Expect = 9.9
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = -1
Query: 407 INGSRESVMTYNLASCSHWNCRGLDKTLLLVSNDATMPMVPIPQADKHFCNEIRT*HVFV 228
+N S + LASCS W+ + V M PIP+ HF N + + HV V
Sbjct: 25 LNASGPRRQWHPLASCSSWSRPQSQGSTPGVLCKTGMGREPIPETQCHFANSMCSLHVSV 84
>AL161742-2|CAI21932.1| 937|Homo sapiens receptor tyrosine
kinase-like orphan receptor 1 protein.
Length = 937
Score = 29.5 bits (63), Expect = 9.9
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 597 TGPSKGSALQNLPPDRKRDPLKRFGENSVGYVYGLIHSSS 478
TGP + +Q+ PP + R P G S G+V L S S
Sbjct: 839 TGPPR--VIQHCPPPKSRSPSSASGSTSTGHVTSLPSSGS 876
>AL137859-2|CAI21732.1| 937|Homo sapiens receptor tyrosine
kinase-like orphan receptor 1 protein.
Length = 937
Score = 29.5 bits (63), Expect = 9.9
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 597 TGPSKGSALQNLPPDRKRDPLKRFGENSVGYVYGLIHSSS 478
TGP + +Q+ PP + R P G S G+V L S S
Sbjct: 839 TGPPR--VIQHCPPPKSRSPSSASGSTSTGHVTSLPSSGS 876
>AK098413-1|BAC05300.1| 195|Homo sapiens subunit. protein.
Length = 195
Score = 29.5 bits (63), Expect = 9.9
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = -1
Query: 407 INGSRESVMTYNLASCSHWNCRGLDKTLLLVSNDATMPMVPIPQADKHFCNEIRT*HVFV 228
+N S + LASCS W+ + V M PIP+ HF N + + HV V
Sbjct: 25 LNASGPRRQWHPLASCSSWSRPQSQGSTPGVLCKTGMGREPIPETQCHFANSMCSLHVSV 84
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,626,097
Number of Sequences: 237096
Number of extensions: 1730742
Number of successful extensions: 3710
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3709
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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