Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0092
         (617 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   3.2  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   7.3  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   7.3  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   7.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.3  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   9.6  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 178 IYIFLSHDFIASLWEAYTKTCY 243
           IY F S DF  + W    + C+
Sbjct: 358 IYAFYSADFRLAFWRLTCRKCF 379


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = +2

Query: 110 VNIKINRV--TIDRLTHRRGFRKLIYI 184
           VN  +N +  TI  L +RR FR+L+ I
Sbjct: 372 VNSALNPLIYTIFNLDYRRAFRRLLRI 398


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = +2

Query: 110 VNIKINRV--TIDRLTHRRGFRKLIYI 184
           VN  +N +  TI  L +RR FR+L+ I
Sbjct: 372 VNSALNPLIYTIFNLDYRRAFRRLLRI 398


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = +2

Query: 110 VNIKINRV--TIDRLTHRRGFRKLIYI 184
           VN  +N +  TI  L +RR FR+L+ I
Sbjct: 372 VNSALNPLIYTIFNLDYRRAFRRLLRI 398


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 571 AESTTGSETRPTEKIRR 521
           A  TTG+ T PT ++R+
Sbjct: 252 AAMTTGTTTIPTRRLRK 268


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 436 RSPRPHQTDRLQRRTRRMN 492
           R  R ++ DR+ R  R+MN
Sbjct: 524 RMDRTNRMDRMNRMNRQMN 542


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,405
Number of Sequences: 438
Number of extensions: 3543
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)