Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0091
(530 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38608| Best HMM Match : Peptidase_C2 (HMM E-Value=0) 218 3e-57
SB_31652| Best HMM Match : Peptidase_C2 (HMM E-Value=0) 185 2e-47
SB_53237| Best HMM Match : No HMM Matches (HMM E-Value=.) 158 2e-39
SB_31653| Best HMM Match : Peptidase_C2 (HMM E-Value=4.5e-09) 120 6e-28
SB_42450| Best HMM Match : Peptidase_C2 (HMM E-Value=0.7) 85 3e-17
SB_54156| Best HMM Match : Peptidase_C2 (HMM E-Value=0) 81 6e-16
SB_5605| Best HMM Match : Peptidase_C2 (HMM E-Value=2e-13) 41 5e-04
SB_12099| Best HMM Match : DUF1220 (HMM E-Value=4.3) 33 0.11
SB_16595| Best HMM Match : Peptidase_A17 (HMM E-Value=9.1e-11) 33 0.19
SB_45841| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.25
SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026) 30 1.0
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_26161| Best HMM Match : Herpes_LP (HMM E-Value=1.7) 29 2.4
SB_53143| Best HMM Match : PKD (HMM E-Value=2.7e-18) 28 4.1
SB_16870| Best HMM Match : Methyltransf_3 (HMM E-Value=1) 28 4.1
SB_48138| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_14385| Best HMM Match : ANF_receptor (HMM E-Value=6.5e-35) 28 4.1
SB_38437| Best HMM Match : VWA (HMM E-Value=0) 28 5.4
SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_14990| Best HMM Match : GlcNAc_2-epim (HMM E-Value=2.7e-05) 28 5.4
SB_3896| Best HMM Match : 7tm_1 (HMM E-Value=0.00045) 28 5.4
SB_46732| Best HMM Match : AAA (HMM E-Value=0.044) 28 5.4
SB_31327| Best HMM Match : GlcNAc_2-epim (HMM E-Value=4.3) 28 5.4
SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5) 28 5.4
SB_52303| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_25016| Best HMM Match : PDZ (HMM E-Value=5.6e-08) 27 7.2
SB_18088| Best HMM Match : zf-C4 (HMM E-Value=7.56701e-44) 27 7.2
SB_6150| Best HMM Match : GAT (HMM E-Value=2.3e-34) 27 7.2
SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_42335| Best HMM Match : Hint (HMM E-Value=1.4013e-45) 27 9.5
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_18084| Best HMM Match : DUF801 (HMM E-Value=0.37) 27 9.5
SB_4606| Best HMM Match : HlyIII (HMM E-Value=0.002) 27 9.5
SB_424| Best HMM Match : AT_hook (HMM E-Value=0.63) 27 9.5
SB_15895| Best HMM Match : Hint (HMM E-Value=1.4013e-45) 27 9.5
>SB_38608| Best HMM Match : Peptidase_C2 (HMM E-Value=0)
Length = 842
Score = 218 bits (532), Expect = 3e-57
Identities = 101/175 (57%), Positives = 131/175 (74%), Gaps = 4/175 (2%)
Frame = +3
Query: 6 DVQQGELGDCWLLAAVANLTLHRKLFFQVVPDD---QSFDEDYAGVFHFRFWQYGRWVDV 176
D+QQG LGDCWLLAA+A LT H L +VVP D D +Y G F WQYG W DV
Sbjct: 255 DIQQGMLGDCWLLAAIAALTQHSALMNKVVPQDYVANPNDRNYTGALKFCIWQYGEWKDV 314
Query: 177 VIDDRLPTYRGKLVFLHSAEANEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTGGVT 356
+IDDRLPTY GKLVF+HS+E NEFWSALLEKAYAKL+GSYE+LKGG T EA+EDFTGG+
Sbjct: 315 IIDDRLPTYNGKLVFVHSSERNEFWSALLEKAYAKLNGSYESLKGGQTGEALEDFTGGLA 374
Query: 357 EMYEMSE-LPPNFYTILLKAYERNSLMGCSIEPDPHILKAETPAGLIRGHAYSVT 518
E +++++ +P + + I+ A +R++LMGCSI + ++A+ GL++GHAY+VT
Sbjct: 375 ESFDLNKNVPKDLFCIMQTAEKRHALMGCSIAAKANEIEAKLNNGLVKGHAYTVT 429
>SB_31652| Best HMM Match : Peptidase_C2 (HMM E-Value=0)
Length = 1133
Score = 185 bits (451), Expect = 2e-47
Identities = 88/180 (48%), Positives = 118/180 (65%), Gaps = 6/180 (3%)
Frame = +3
Query: 6 DVQQGELGDCWLLAAVANLTLHRKLFFQVVPDDQSFDE-DYAGVFHFRFWQYGRWVDVVI 182
DV QG + +CW +AA+A+LT + L V P DQSF+ Y G+F F FWQ+G WV+V++
Sbjct: 70 DVAQGRIRNCWFVAALADLTTNIDLLHHVCPPDQSFEPGSYCGMFRFNFWQFGEWVEVIV 129
Query: 183 DDRLPTYRGKLVFLHSAEANEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTGGVTEM 362
DD LPTY G+L F S + +EFWSALLEKAYAKL GSYEA+ G EA++D TGG+ E
Sbjct: 130 DDYLPTYNGRLYFTKSDDPDEFWSALLEKAYAKLCGSYEAMSLGRISEALQDMTGGMIEN 189
Query: 363 YEMSELPPNFYTILLKAYERNSLMGCSIEPDPHILKAE-----TPAGLIRGHAYSVTRVK 527
++ P + +++KAYER SLMGCSIE ++ GLI HAYS+T ++
Sbjct: 190 VDLQNPPHGLFNVMMKAYERQSLMGCSIESKQPSSSSDQYEGTLENGLITRHAYSITGLR 249
>SB_53237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 158 bits (384), Expect = 2e-39
Identities = 81/172 (47%), Positives = 110/172 (63%), Gaps = 14/172 (8%)
Frame = +3
Query: 6 DVQQGELGDCWLLAAVANLTLHRKLFFQVVPDD--QSFD----EDYAGVFHFRFWQYGRW 167
DV QG+LG+CW +AA ++L L L ++V+PD Q +D E+Y G+F FRF++ G W
Sbjct: 74 DVTQGKLGNCWFVAACSSLALRPFLLYKVIPDKDKQEWDPKKPENYQGIFRFRFYRQGEW 133
Query: 168 VDVVIDDRLPTYRGKLVFLHSAEANEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTG 347
+VV+DD LPT GKLV++HS E NEFWSAL+EKAYAKL G+YEAL GST +A+ DFTG
Sbjct: 134 TEVVVDDLLPTVNGKLVYIHSKEKNEFWSALIEKAYAKLAGTYEALAAGSTADALVDFTG 193
Query: 348 GVTEMYEMS--------ELPPNFYTILLKAYERNSLMGCSIEPDPHILKAET 479
GV E +S E + L + ++ SLM SI+ +KA +
Sbjct: 194 GVAEAISLSNGGYAEDQEKRLQLFKTLERGHKEKSLMSASIKNSLQYVKASS 245
>SB_31653| Best HMM Match : Peptidase_C2 (HMM E-Value=4.5e-09)
Length = 208
Score = 120 bits (290), Expect = 6e-28
Identities = 54/95 (56%), Positives = 68/95 (71%), Gaps = 4/95 (4%)
Frame = +3
Query: 6 DVQQGELGDCWLLAAVANLTLHRKLFFQVVPDD----QSFDEDYAGVFHFRFWQYGRWVD 173
D++QG LG+CWLLAA++ L H+ L +++P+ F Y G F+ WQYG WV
Sbjct: 113 DIKQGVLGNCWLLAAMSVLAQHKPLVDRIMPEGVYEADRFSPRYTGKVVFKLWQYGEWVT 172
Query: 174 VVIDDRLPTYRGKLVFLHSAEANEFWSALLEKAYA 278
V+IDDRLPTY+GKLVF+HS E NEFW ALLEKAYA
Sbjct: 173 VIIDDRLPTYKGKLVFVHSPEKNEFWCALLEKAYA 207
>SB_42450| Best HMM Match : Peptidase_C2 (HMM E-Value=0.7)
Length = 85
Score = 85.0 bits (201), Expect = 3e-17
Identities = 38/80 (47%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
Frame = +3
Query: 282 LHGSYEALKGGSTCEAMEDFTGGVTEMYEMSE-LPPNFYTILLKAYERNSLMGCSIEPDP 458
L+GSYE+LKGG T EA+EDFTGG+ E +++++ +P + + I+ A +R++LMGCSI
Sbjct: 2 LNGSYESLKGGQTGEALEDFTGGLAESFDLNKNVPKDLFCIMQTAEKRHALMGCSIAAKA 61
Query: 459 HILKAETPAGLIRGHAYSVT 518
+ ++A+ GL++GHAY+VT
Sbjct: 62 NEIEAKLNNGLVKGHAYTVT 81
>SB_54156| Best HMM Match : Peptidase_C2 (HMM E-Value=0)
Length = 1001
Score = 81.0 bits (191), Expect = 6e-16
Identities = 45/119 (37%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Frame = +3
Query: 6 DVQQGELGDCWLLAAVANLTLHRKLFFQVVPDDQSFDEDYAGVFHFRFWQYGRWVDVVID 185
D+ QG LGDCW L+++A L +L +++ + + G + R + G+W ++ID
Sbjct: 493 DIIQGVLGDCWFLSSLAVLAERPELLEKILITREVSPQ---GAYQVRLCKDGKWTVILID 549
Query: 186 DRLP-TYRGKLVFLHSAEANEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTGGVTE 359
D LP RG+ V+ A + W L+EKA AKLHGSYEAL G + E + TG E
Sbjct: 550 DLLPCNQRGQPVYSW-AHRRQLWVPLIEKAMAKLHGSYEALTAGRSIEGLATLTGAPCE 607
>SB_5605| Best HMM Match : Peptidase_C2 (HMM E-Value=2e-13)
Length = 598
Score = 41.1 bits (92), Expect = 5e-04
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Frame = +3
Query: 3 FDVQQGELGDCWLLAAVANLTLH-----RKLFFQVVPDDQSFDEDY---AGVFHFRFWQY 158
F+V+Q L DC ++++A + ++L +++ + +G + +
Sbjct: 223 FNVKQTILSDCSFVSSLAISAAYERDFKKQLITRIIYPQNKIGKPVINPSGKYMIKLKLN 282
Query: 159 GRWVDVVIDDRLPTYR-GKLVFLHSAEANEFWSALLEKAYAK 281
G V+IDD LP + GKL+ HS NE W +L+EKAY K
Sbjct: 283 GVSRKVIIDDLLPMGKDGKLLCGHSTNRNEMWISLVEKAYMK 324
>SB_12099| Best HMM Match : DUF1220 (HMM E-Value=4.3)
Length = 713
Score = 33.5 bits (73), Expect = 0.11
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 147 FWQYGRWVDVVIDDRLP-TYRGKLVFLHSAEANEFWSALLEKAYAKL 284
+W G W V +DD +P GK++ S +E W LL KA K+
Sbjct: 250 YWM-GAWRKVTVDDWMPFDEEGKMLLPASPNEHELWPMLLSKALIKV 295
>SB_16595| Best HMM Match : Peptidase_A17 (HMM E-Value=9.1e-11)
Length = 1692
Score = 32.7 bits (71), Expect = 0.19
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = -2
Query: 364 YISVTPP---VKSSMASQVEPPLRASYDPWSFAY-AFSSRALQNSFASAEWRNTSFPRYV 197
Y +VT P + S + PPL+ +Y PWS Y F +R NS S + S P +
Sbjct: 381 YPTVTHPENGIPSFYETPRRPPLQTNYQPWSLGYNPFGTRTSLNSEVSL--KRISLPIFS 438
Query: 196 GRR 188
G R
Sbjct: 439 GLR 441
>SB_45841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 47
Score = 32.3 bits (70), Expect = 0.25
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 159 GRWVDVVIDDRLP-TYRGKLVFLHSAEANEFWSALLEKAYAKL 284
G W V +DD +P GK++ S +E W LL KA K+
Sbjct: 1 GAWRKVTVDDWMPFDEEGKMLLPASPNEHELWPMLLSKALIKV 43
>SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026)
Length = 1080
Score = 30.3 bits (65), Expect = 1.0
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = +1
Query: 226 TRPRRTSSGVLYSRRHMRNSTDRTKPSREARPARPWRTSPAASPKCTR 369
TR R + +L S R R+ST TKP R AR T P S + TR
Sbjct: 221 TRRRGSEKKLLGSARRARDST--TKPLTSTRRARDSTTKPLTSTRRTR 266
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +2
Query: 140 FPFLAVRALGGRGHRRPSPNVPRETGVPPLGRGERVLECSTREGICETPRI 292
FP V+ R S ++ R++ VPP+G+ E V S + PR+
Sbjct: 323 FPASMVKLANPRRQSMRSSSIMRDSAVPPIGKYEMVALASASHPLGPRPRM 373
>SB_26161| Best HMM Match : Herpes_LP (HMM E-Value=1.7)
Length = 412
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 283 STDRTKPSREARPARPWRTSPAASPKC 363
S +R KPS RP+RP T P + KC
Sbjct: 69 SDNRPKPSYRPRPSRPKPTLPPFAQKC 95
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 283 STDRTKPSREARPARPWRTSPAASPKC 363
S +R KPS RP+RP T P + KC
Sbjct: 124 SDNRPKPSYRPRPSRPKPTLPPFAQKC 150
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 283 STDRTKPSREARPARPWRTSPAASPKC 363
S +R KPS RP+RP T P + KC
Sbjct: 179 SDNRPKPSYRPRPSRPKPTLPPFAQKC 205
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 283 STDRTKPSREARPARPWRTSPAASPKC 363
S +R KPS RP+RP T P + KC
Sbjct: 234 SDNRPKPSYRPRPSRPKPTLPPFAQKC 260
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 283 STDRTKPSREARPARPWRTSPAASPKC 363
S +R KPS RP+RP T P + KC
Sbjct: 289 SDNRPKPSYRPRPSRPKPTLPPFAEKC 315
>SB_53143| Best HMM Match : PKD (HMM E-Value=2.7e-18)
Length = 2111
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = -1
Query: 470 LEDVGVGLNTAAHKRVPLVRLQQDRVEVWRQFGHLVHFGDAAGEVLH 330
L +V VG + + +V Q D + F L+HFGD ++H
Sbjct: 686 LFNVSVGTACPTNATIAMVYGQIDSLVAINMFSTLLHFGDGCNRMVH 732
>SB_16870| Best HMM Match : Methyltransf_3 (HMM E-Value=1)
Length = 766
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Frame = +3
Query: 330 MEDFTGGVTE--MYEMSELPPNFYTILLKAYERNSLMGCSIE 449
+ +F+ VT+ ++S+L P +YTILL+ E++ + S++
Sbjct: 438 LSEFSSCVTDEGKQQLSKLLPQYYTILLRKIEQDPMSKSSLD 479
>SB_48138| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1913
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +1
Query: 220 SSTRPRRTSSGVLYSRRHMRNSTDRTKPSREARPARPWRTSPAASPKCTRCP 375
+ TR ++TS+G + ++ +S + +RPA R S P CP
Sbjct: 698 TQTRQKKTSAGKPAAGKNPIDSKGSPTSEKSSRPATRGRPSTGRKPSAKSCP 749
>SB_14385| Best HMM Match : ANF_receptor (HMM E-Value=6.5e-35)
Length = 1003
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +3
Query: 198 TYRGKLVFLHSAEANEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTGGVTEMY 365
T +GK F+H A E+ + KL G Y+ G ST E +T +Y
Sbjct: 719 TLKGKYAFIHDAPILEYLARKTYCGRIKLIGGYDTRPGVSTDVRNERDAATLTPLY 774
>SB_38437| Best HMM Match : VWA (HMM E-Value=0)
Length = 3445
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/49 (26%), Positives = 20/49 (40%)
Frame = -2
Query: 220 NTSFPRYVGRRSSMTTSTQRPYCQKRKWKTPAXXXXXXXXSGTTWKNNL 74
NT R+V R + S + R+W A GT W+N++
Sbjct: 1551 NTVIVRFVNRNRRLVRSVSSRGVKPRRWNYLAFTYDARTGLGTIWRNSV 1599
>SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/42 (23%), Positives = 20/42 (47%)
Frame = +1
Query: 247 SGVLYSRRHMRNSTDRTKPSREARPARPWRTSPAASPKCTRC 372
+G+ +S+ +R + + R PW+ PA C++C
Sbjct: 124 TGLRHSQMKLRRDPETCFGCGDRRGPHPWKECPANGKSCSKC 165
>SB_14990| Best HMM Match : GlcNAc_2-epim (HMM E-Value=2.7e-05)
Length = 333
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 84 FQVVPDDQSFDEDYAGVFHF 143
F V P DQ +D+D+ G+F+F
Sbjct: 258 FIVDPFDQGWDKDFGGIFYF 277
>SB_3896| Best HMM Match : 7tm_1 (HMM E-Value=0.00045)
Length = 538
Score = 27.9 bits (59), Expect = 5.4
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +1
Query: 40 CWLPLPT*HFIASYSSKLYLMI 105
CWLP+ HF+ ++ K Y+ +
Sbjct: 440 CWLPVHVNHFLGTFDRKAYICL 461
>SB_46732| Best HMM Match : AAA (HMM E-Value=0.044)
Length = 430
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 188 PSPNVPRETGVPPLGRGE 241
P PN+P++ +PP G GE
Sbjct: 13 PPPNLPKQLPIPPAGGGE 30
>SB_31327| Best HMM Match : GlcNAc_2-epim (HMM E-Value=4.3)
Length = 220
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 84 FQVVPDDQSFDEDYAGVFHF 143
F V P DQ +D+D+ G+F+F
Sbjct: 57 FIVDPFDQGWDKDFGGIFYF 76
>SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5)
Length = 435
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 220 SSTRPRRTSSGVLYSRRHMRNSTDRTKPSREARPARP-WRTSPAASPKCTR 369
+ T+ R S SR+ + +TKP R + ARP +T P+ K +R
Sbjct: 6 TKTKRPRPSGKTKTSRKTKTSHKTKTKPKRPRQAARPSCKTKPSRKTKTSR 56
>SB_52303| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 68
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 24 LGDCWLLAAVANLTLHRKLFFQVVPDDQSFDEDYA 128
+G C LL + L LFF+ P ++ ++DYA
Sbjct: 12 IGSCCLLLLILYQCLKAGLFFKTEPPERPNEKDYA 46
>SB_25016| Best HMM Match : PDZ (HMM E-Value=5.6e-08)
Length = 816
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 156 TARNGNGRRPHNLHRNSDH 100
+ARNGNG + H N DH
Sbjct: 31 SARNGNGTTSYTRHMNGDH 49
>SB_18088| Best HMM Match : zf-C4 (HMM E-Value=7.56701e-44)
Length = 1220
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 173 RGHRRPSPNVPRETGVPPLGRGERVL 250
RG RP P + R GVP G +R++
Sbjct: 460 RGRHRPHPIIKRHIGVPDHGGFQRII 485
>SB_6150| Best HMM Match : GAT (HMM E-Value=2.3e-34)
Length = 674
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +1
Query: 259 YSRRHMRNSTDRTKPSREARPARPWRTSPAAS 354
Y R ST T P+ RPA P R SPAA+
Sbjct: 242 YERFRQAQSTPST-PTEPPRPAEPPRPSPAAT 272
>SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2722
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 227 LGRGERVLECSTREGICE-TPRIVRSPQ 307
LG E +L CS EG+ E +P + R P+
Sbjct: 1834 LGEVEEMLHCSENEGVIEASPEVERKPK 1861
>SB_42335| Best HMM Match : Hint (HMM E-Value=1.4013e-45)
Length = 825
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 331 MASQVEPPLRASYDPWS-FAYAFSSRALQNSFASAE 227
+A V PLRA YD W+ F +FS +QNS E
Sbjct: 765 IAHGVMLPLRAWYDLWNFFGLSFSVFDMQNSVTGNE 800
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2
Query: 188 PSPNVPRETGVPPLG 232
PSP VP TG+PP G
Sbjct: 1005 PSPGVPSPTGLPPSG 1019
>SB_18084| Best HMM Match : DUF801 (HMM E-Value=0.37)
Length = 599
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -1
Query: 488 PRRSLRLEDVGVGLNTAAHKRVPLVRLQQDRVEVWRQFGHLVHFGDAAG 342
PR +++V +G +AH+ + ++D VW LVH A G
Sbjct: 80 PRICAYIDNVLIGGFLSAHQPYEIAEWEEDHSYVWITLKALVHLAFAGG 128
>SB_4606| Best HMM Match : HlyIII (HMM E-Value=0.002)
Length = 458
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -1
Query: 248 ELVRLG-RVEEHQFPSVRWETVVDDHVHPAPVL 153
+LV+LG R H RW+T V DH+ P +L
Sbjct: 216 KLVKLGKRYGCHTCGRKRWQTFVGDHIPPNKLL 248
>SB_424| Best HMM Match : AT_hook (HMM E-Value=0.63)
Length = 201
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +2
Query: 188 PSPNVPRETGVPPLGRGERVLECSTREG-IC 277
PSP V ++ G P R E C+T G IC
Sbjct: 113 PSPEVKKKRGRPKANRSEATEYCTTTRGYIC 143
>SB_15895| Best HMM Match : Hint (HMM E-Value=1.4013e-45)
Length = 561
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 331 MASQVEPPLRASYDPWS-FAYAFSSRALQNSFASAE 227
+A V PLRA YD W+ F +FS +QNS E
Sbjct: 501 IAHGVMLPLRAWYDLWNFFGLSFSVFDMQNSVTGNE 536
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,935,397
Number of Sequences: 59808
Number of extensions: 413280
Number of successful extensions: 2048
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2037
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1191330434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -