Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0089
(638 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 82 3e-16
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 67 1e-11
11_01_0750 - 6315126-6315896,6316371-6316784 67 1e-11
01_06_0824 - 32243495-32244319,32244449-32244859 54 7e-08
11_01_0767 + 6438648-6438809,6439146-6440000 45 6e-05
05_06_0044 - 25150322-25151260 43 2e-04
01_01_1152 + 9170628-9171899 39 0.004
11_02_0014 - 7352619-7352918,7353173-7353418 38 0.007
11_02_0012 - 7346282-7347136,7347234-7347593 38 0.007
04_04_0619 + 26652923-26653267,26653440-26654273 37 0.012
11_02_0011 - 7337618-7338496,7338596-7338991 37 0.016
11_01_0771 + 6453130-6454488 30 1.3
01_06_0213 + 27580635-27581105,27581206-27581298,27581376-275815... 29 4.1
07_01_0464 - 3504264-3504475,3504842-3505031,3505310-3505408,350... 28 7.2
05_01_0488 - 4070506-4072277,4072455-4072557 28 7.2
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 82.2 bits (194), Expect = 3e-16
Identities = 52/160 (32%), Positives = 90/160 (56%), Gaps = 8/160 (5%)
Frame = -1
Query: 638 AIYFKGAWSSKFDERMTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPYK- 462
A+YFKGAW+ KFD T D +F++ K+++ P M +Y S N +++++PY+
Sbjct: 249 ALYFKGAWTEKFDASKTKDGEFHLLDGKSVQAPFM-STSKKQYILSYD-NLKVLKLPYQQ 306
Query: 461 -GD--QSSLIVVLPKDKDGITQLQEAL-KDPKTLETAQQSMYSTEVDLYLPKFKIETETN 294
GD Q S+ ++LP+ +DG+ L E L +P+ LE + T LPKFKI
Sbjct: 307 GGDKRQFSMYILLPEAQDGLWSLAEKLNSEPEFLEKHIPTRQVTVGQFKLPKFKISFGFE 366
Query: 293 LKDVLSNMNVNKIFNNDAQITRLL---KGESLSVSEAIQK 183
D+L ++ ++ F+++A +T ++ +G++L VS K
Sbjct: 367 ASDLLKSLGLHLPFSSEADLTEMVDSPEGKNLFVSSVFHK 406
Score = 66.9 bits (156), Expect = 1e-11
Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 9/161 (5%)
Frame = -1
Query: 638 AIYFKGAWSSKFDERMTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPY-- 465
A+YFKGAW+ KFD T D +F++ ++++ P M R K S+ + +++++PY
Sbjct: 501 ALYFKGAWAEKFDVSKTEDGEFHLLDGESVQAPFMSTR--KKQYLSSYDSLKVLKLPYLQ 558
Query: 464 KGD--QSSLIVVLPKDKDGITQLQEAL-KDPKTLETAQQSMYSTEVDLY-LPKFKIETET 297
GD Q S+ ++LP+ +DG+ L E L +P+ +E M V + LPKFKI
Sbjct: 559 GGDKRQFSMYILLPEAQDGLWSLAEKLNSEPEFMEN-HIPMRPVHVGQFKLPKFKISFGF 617
Query: 296 NLKDVLSNMNVNKIFNNDAQITRLLK---GESLSVSEAIQK 183
+L + + +F ++ + ++ ++L VS K
Sbjct: 618 GASGLLKGLGLPLLFGSEVDLIEMVDSPGAQNLFVSSVFHK 658
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 67.3 bits (157), Expect = 1e-11
Identities = 45/144 (31%), Positives = 75/144 (52%), Gaps = 5/144 (3%)
Frame = -1
Query: 638 AIYFKGAWSSKFDERMTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPY-K 462
A+YFKGAW+ KFD T D +F + K++ P M K S+ + +++++PY K
Sbjct: 41 ALYFKGAWTEKFDASKTKDGEFRLLDGKSVLAPFM--STSKKQYLSSYDSLKVLKLPYQK 98
Query: 461 G---DQSSLIVVLPKDKDGITQLQEAL-KDPKTLETAQQSMYSTEVDLYLPKFKIETETN 294
G Q S+ ++LP+ +DG+ L L +P+ LE + T LPKFKI
Sbjct: 99 GRDLRQFSMYILLPEAQDGLWSLAAKLNSEPEFLEKRIPTRQVTVGKFKLPKFKISFGFE 158
Query: 293 LKDVLSNMNVNKIFNNDAQITRLL 222
D+L + + F++ A +T ++
Sbjct: 159 ASDLLKILGLQLPFSSKADLTGMV 182
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 66.9 bits (156), Expect = 1e-11
Identities = 43/152 (28%), Positives = 80/152 (52%), Gaps = 7/152 (4%)
Frame = -1
Query: 638 AIYFKGAWSSKFDERMTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAAL--NAQLIEIPY 465
A+YF+G W + D R T+++ FY +++VP + +Y A+ N ++I++PY
Sbjct: 178 ALYFRGRWLDRDDLRRTTEQKFYCLDGTSVEVPFV----EYDRTRLFAVHDNFKVIKLPY 233
Query: 464 KGDQS----SLIVVLPKDKDGITQL-QEALKDPKTLETAQQSMYSTEVDLYLPKFKIETE 300
K ++ S+ + LP D DG+ +L Q+ +P LE V + +P FKI +
Sbjct: 234 KQGKNERKFSMYIFLPDDHDGLFELTQKIFSEPMFLE-QHLPTEKCHVGISVPNFKISFQ 292
Query: 299 TNLKDVLSNMNVNKIFNNDAQITRLLKGESLS 204
++KD L +M + F +A+ + ++K + S
Sbjct: 293 IDVKDFLKDMGLELPFLREAEFSDMIKEDDSS 324
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 54.4 bits (125), Expect = 7e-08
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Frame = -1
Query: 638 AIYFKGAWSSKFDERMTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPY-- 465
A+YFKG W SKFD R TSD FY+ + P M G ++Y A +++ +PY
Sbjct: 177 ALYFKGDWESKFDARSTSDDVFYLPDGGHVSAPFM-SSGKWQYIACRA-GYKVLRLPYAR 234
Query: 464 --------KGDQSSLIVVLPKDKDGI-TQLQEALKDPKTL-ETAQQSMYSTEVDLYL-PK 318
G S+ + LP ++ G+ L++ DP L E++ V ++ P+
Sbjct: 235 GGRGRGRDTGRLFSMYIYLPDERHGLPDMLRKLCSDPAALIESSAALTEKVPVGAFMVPR 294
Query: 317 FKIETETNLKDVLSNMNVNKIF 252
F + +TN + L + + F
Sbjct: 295 FTLSYKTNAAETLRQLGLRLPF 316
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 44.8 bits (101), Expect = 6e-05
Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 15/145 (10%)
Frame = -1
Query: 638 AIYFKGAWSSKFDERMTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPYKG 459
AIYFKG W + FD+ T++R+F +++VP M + + + +++ +PYK
Sbjct: 94 AIYFKGEWLAPFDKSDTAEREFRRLDGSSVEVPFMQRPSGSYHHVACHDGFRVLRLPYKA 153
Query: 458 DQS-------------SLIVVLPKDKDGITQLQEAL-KDPKTLETAQQSMYSTEVDLYLP 321
+++V LP D+DG+ L + + P+ ++ +P
Sbjct: 154 TSDTYNLKLRYSLPSFAMLVFLPDDRDGLPGLLDRITASPEFVDEHLPPGCVPVGRFRVP 213
Query: 320 KFKIE-TETNLKDVLSNMNVNKIFN 249
KFK+ + DVL + + F+
Sbjct: 214 KFKLAFCHYGIADVLRGLGLRLPFD 238
>05_06_0044 - 25150322-25151260
Length = 312
Score = 43.2 bits (97), Expect = 2e-04
Identities = 31/140 (22%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Frame = -1
Query: 638 AIYFKGAWSSKFDERMTSDRDFYVSKDKTIKVPMMYKRGDYKYGE-SAALNAQLIEIPYK 462
++YF W F +T + DF+VS D ++VP M + + + ++ + Y+
Sbjct: 83 SLYFNAYWDHPFFPHLTEEGDFHVSPDHDVRVPFMAGSHQHAFMDVGCHPGFNVLRMMYR 142
Query: 461 ------GDQS-SLIVVLPKDKDGITQLQEAL-KDPKTL--ETAQQSMYSTEVDLYLPKFK 312
GD+ ++ + LP D+DG+ +L L +P T + +L +PKF+
Sbjct: 143 TGGAAGGDKMFAMYIYLPDDRDGLPELARKLASNPAAFLRRTIVPAQPVAVGELKIPKFE 202
Query: 311 IETETNLKDVLSNMNVNKIF 252
+ + +L ++ F
Sbjct: 203 VSLKVEASRLLREFGLDLPF 222
>01_01_1152 + 9170628-9171899
Length = 423
Score = 38.7 bits (86), Expect = 0.004
Identities = 35/163 (21%), Positives = 68/163 (41%), Gaps = 15/163 (9%)
Frame = -1
Query: 638 AIYFKGAWSSKFDERMTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPYK- 462
A++FKG WS F T F++ ++ P M ++ +A +++PYK
Sbjct: 195 AVHFKGTWSLPFHPSATFHAPFHLLDGGAVRAPFMTTEIPFERHVAAFPGFTALKLPYKN 254
Query: 461 ------GD----QSSLIVVLPKDKDGITQLQE----ALKDPKTLETAQQSMYSTEVDLYL 324
GD + +++L D DG +L + A+ P+ ++ + + L +
Sbjct: 255 VGGGGGGDGVPRAAFYMLLLLPDGDGALKLADLYDMAVTTPEFIKKHTPAAEAPVRRLMV 314
Query: 323 PKFKIETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSE 195
PKFK + K + + V + F + G+ L ++E
Sbjct: 315 PKFKFSFKFEAKSDMRKLGVTRAFAGGDFSGMVTGGDGLFIAE 357
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = -1
Query: 638 AIYFKGAWSSKFDERMTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPYKG 459
AIYFKG WS F T+ F+ ++ V M R D G N ++++PY G
Sbjct: 122 AIYFKGKWSDPFPRESTTTGKFHRLDGSSVNVRFMRSREDQYIGFYDGFN--VLKLPYNG 179
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 37.9 bits (84), Expect = 0.007
Identities = 41/184 (22%), Positives = 74/184 (40%), Gaps = 32/184 (17%)
Frame = -1
Query: 638 AIYFKGAWSSKFDERMTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPY-- 465
AIYFKG WS+ F T+ F+ ++ P M R D G +++++PY
Sbjct: 160 AIYFKGKWSNPFPRERTTTGKFHRLDGSSVDAPFMSSREDQYIGFYDGF--KVLKLPYHR 217
Query: 464 ----KGDQS----------------SLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYS 345
GD S+ + LP +DG+ L + + + TA S
Sbjct: 218 TMKNHGDGGDITPAILKHYGENVGLSMYIFLPDARDGLPALVDKMAVASS-GTASSSFLR 276
Query: 344 TE---------VDLYLPKFKIETETNLKDVLSNMNVNKIFN-NDAQITRLLKGESLSVSE 195
DL +P+FK+ + + +VL M + F+ ++ ++ GE + V +
Sbjct: 277 DHRPGRRRIKVGDLRVPRFKVSFYSEMNEVLKGMGIGAAFDVGKVDLSGMIDGELVVVEK 336
Query: 194 AIQK 183
+ +
Sbjct: 337 VMHR 340
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 37.1 bits (82), Expect = 0.012
Identities = 30/142 (21%), Positives = 58/142 (40%), Gaps = 12/142 (8%)
Frame = -1
Query: 638 AIYFKGAWSSKFDERMTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPYK- 462
A++FK W KF+ T R F+ + VP + + L +++++ YK
Sbjct: 155 AMHFKATWGRKFESYDTQRRRFHRQDGTRVTVPFLSDPRTHYAARFDGLGFKVLQLFYKM 214
Query: 461 -GDQSS---------LIVVLPKDKDGITQ-LQEALKDPKTLETAQQSMYSTEVDLYLPKF 315
G ++V LP +DG+ L+ A+ +P + +PKF
Sbjct: 215 VGHDGQVHFGAPCFCMLVFLPIKRDGLRHLLRMAVTEPDFVMRCVPRSEQEVSPCMVPKF 274
Query: 314 KIETETNLKDVLSNMNVNKIFN 249
K +E + + L+ + + F+
Sbjct: 275 KFSSELDARGALAKLGLGAPFD 296
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 36.7 bits (81), Expect = 0.016
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = -1
Query: 638 AIYFKGAWSSKFDERMTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPY 465
AIYFKG WS+ F T+ F+ ++ VP M R D G ++++PY
Sbjct: 172 AIYFKGKWSNPFPRSSTTTGKFHRLDGSSVDVPFMSSREDQYIGFHDGFT--VLKLPY 227
>11_01_0771 + 6453130-6454488
Length = 452
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 638 AIYFKGAWSSKFDERMTSDRDFY 570
AIYFKG W F+E T + FY
Sbjct: 209 AIYFKGKWDRPFNESDTERKPFY 231
>01_06_0213 +
27580635-27581105,27581206-27581298,27581376-27581540,
27581640-27581862,27582329-27582429,27582666-27582713,
27583086-27583172,27583745-27583879,27583985-27584140,
27585336-27585545,27585641-27586351,27586429-27586974,
27587872-27588495,27588595-27588699,27590460-27590711,
27590939-27591766
Length = 1584
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/76 (25%), Positives = 31/76 (40%)
Frame = -1
Query: 581 RDFYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPYKGDQSSLIVVLPKDKDGITQL 402
RD SK + R D K E A + ++ PY+ D + VVL ++ I
Sbjct: 568 RDLTTSKTPEASIAAALSR-DTKLFERTAPSTYCVKSPYRKDPADSEVVLSSAREKIRAF 626
Query: 401 QEALKDPKTLETAQQS 354
Q + D + + A +
Sbjct: 627 QNVISDSEAEKEANDA 642
>07_01_0464 -
3504264-3504475,3504842-3505031,3505310-3505408,
3505561-3505653,3505926-3506891,3507267-3507485,
3508038-3508247,3508371-3508630,3508956-3510737,
3510796-3511009
Length = 1414
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = -1
Query: 380 KTLETAQQSMYSTEVDLYLP-KFKIETETNL 291
K +E A Q +YSTEV+L+ F +ET+T L
Sbjct: 809 KGMEEADQKIYSTEVNLHSQYYFYMETQTAL 839
>05_01_0488 - 4070506-4072277,4072455-4072557
Length = 624
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/75 (24%), Positives = 39/75 (52%)
Frame = -1
Query: 506 ESAALNAQLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEVDLY 327
E+++L L E+ K ++ +L V+ +KD I +L+E++ + + TE+D
Sbjct: 229 ETSSLQKDLDEV--KSEKEALEAVVLVNKDEIDRLKESMVSAAKQFEVELAHRDTEIDKC 286
Query: 326 LPKFKIETETNLKDV 282
+ ++ +E L D+
Sbjct: 287 KQELEVLSEKYLHDI 301
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,174,310
Number of Sequences: 37544
Number of extensions: 252218
Number of successful extensions: 563
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 554
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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