SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0089
         (638 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g25240.1 68415.m03020 serpin, putative / serine protease inhi...    89   2e-18
At2g26390.1 68415.m03167 serpin, putative / serine protease inhi...    88   5e-18
At3g45220.1 68416.m04880 serpin, putative / serine protease inhi...    78   4e-15
At2g14540.1 68415.m01628 serpin family protein / serine protease...    60   9e-10
At1g47710.1 68414.m05302 serpin, putative / serine protease inhi...    58   6e-09
At1g64030.1 68414.m07252 serpin family protein / serine protease...    56   2e-08
At2g35580.1 68415.m04357 serpin family protein / serine protease...    50   1e-06
At1g62170.1 68414.m07013 serpin family protein / serine protease...    46   2e-05
At1g63280.1 68414.m07154 serpin-related / serine protease inhibi...    42   5e-04
At1g51330.1 68414.m05772 serpin-related / serine protease inhibi...    42   5e-04
At3g15970.1 68416.m02019 Ran-binding protein 1 domain-containing...    29   2.6  
At3g07525.2 68416.m00898 autophagocytosis-associated family prot...    28   4.5  
At3g07525.1 68416.m00897 autophagocytosis-associated family prot...    28   4.5  
At5g46290.1 68418.m05698 3-oxoacyl-[acyl-carrier-protein] syntha...    27   7.9  
At1g31160.1 68414.m03812 zinc-binding protein, putative / protei...    27   7.9  

>At2g25240.1 68415.m03020 serpin, putative / serine protease
           inhibitor, putative similar to phloem serpin-1
           [Cucurbita maxima] GI:9937311; contains Pfam profile
           PF00079: Serpin (serine protease inhibitor)
          Length = 324

 Score = 89.4 bits (212), Expect = 2e-18
 Identities = 54/159 (33%), Positives = 82/159 (51%), Gaps = 7/159 (4%)
 Frame = -1

Query: 638 AIYFKGAWSSKFDERMTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPYKG 459
           A+YFKGAWSSKFD  MT   DF++    ++KVP M    D +Y  S     +++ +PY  
Sbjct: 107 AVYFKGAWSSKFDANMTKKNDFHLLDGTSVKVPFMTNYED-QYLRSYD-GFKVLRLPYIE 164

Query: 458 DQS--SLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEVDLY-LPKFKIETETNLK 288
           DQ   S+ + LP DK+G+  L E +    +       ++   V  + +PKFK   E N  
Sbjct: 165 DQRQFSMYIYLPNDKEGLAPLLEKIGSEPSFFDNHIPLHCISVGAFRIPKFKFSFEFNAS 224

Query: 287 DVLSNMNVNKIFNNDAQITRLL----KGESLSVSEAIQK 183
           +VL +M +   FNN   +T ++     G+ L VS  + K
Sbjct: 225 EVLKDMGLTSPFNNGGGLTEMVDSPSNGDDLYVSSILHK 263


>At2g26390.1 68415.m03167 serpin, putative / serine protease
           inhibitor, putative similar to phloem serpin-1
           [Cucurbita maxima] GI:9937311; contains Pfam profile
           PF00079: Serpin (serine protease inhibitor)
          Length = 389

 Score = 87.8 bits (208), Expect = 5e-18
 Identities = 53/160 (33%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
 Frame = -1

Query: 638 AIYFKGAWSSKFDERMTSDRDFYVSKDKTIKVP-MMYKRGDYKYGESAALNAQLIEIPYK 462
           A+YFK AWS KFD ++T D DF++    T+KVP MM  +  Y  G       Q++ +PY 
Sbjct: 172 AVYFKAAWSRKFDAKLTKDNDFHLLDGNTVKVPFMMSYKDQYLRGYD---GFQVLRLPYV 228

Query: 461 GDQS--SLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEVD-LYLPKFKIETETNL 291
            D+   S+ + LP DKDG+  L E +        +   ++ T VD L +PK     E   
Sbjct: 229 EDKRHFSMYIYLPNDKDGLAALLEKISTEPGFLDSHIPLHRTPVDALRIPKLNFSFEFKA 288

Query: 290 KDVLSNMNVNKIFNNDAQITRLL----KGESLSVSEAIQK 183
            +VL +M +   F +   +T ++     G+ L VS  I K
Sbjct: 289 SEVLKDMGLTSPFTSKGNLTEMVDSPSNGDKLHVSSIIHK 328


>At3g45220.1 68416.m04880 serpin, putative / serine protease
           inhibitor, putative similar to phloem serpin-1
           [Cucurbita maxima] GI:9937311; contains Pfam profile
           PF00079: Serpin (serine protease inhibitor)
          Length = 393

 Score = 78.2 bits (184), Expect = 4e-15
 Identities = 47/149 (31%), Positives = 76/149 (51%), Gaps = 5/149 (3%)
 Frame = -1

Query: 638 AIYFKGAWSSKFDERMTSDRDFYVSKDKTIKVPMM--YKRGDYKYGESAALNAQLIEIPY 465
           A+YFKGAWS KFD ++T   DF++     +KVP M  YK+   +Y +      +++ +PY
Sbjct: 172 AVYFKGAWSKKFDAKLTKSYDFHLLDGTMVKVPFMTNYKKQYLEYYD----GFKVLRLPY 227

Query: 464 KGDQS--SLIVVLPKDKDGI-TQLQEALKDPKTLETAQQSMYSTEVDLYLPKFKIETETN 294
             DQ   ++ + LP D+DG+ T L+E    P+ L+              +PKFK   E  
Sbjct: 228 VEDQRQFAMYIYLPNDRDGLPTLLEEISSKPRFLDNHIPRQRILTEAFKIPKFKFSFEFK 287

Query: 293 LKDVLSNMNVNKIFNNDAQITRLLKGESL 207
             DVL  M +   F +   +T +++  S+
Sbjct: 288 ASDVLKEMGLTLPFTH-GSLTEMVESPSI 315


>At2g14540.1 68415.m01628 serpin family protein / serine protease
           inhibitor family protein similar to phloem serpin-1
           [Cucurbita maxima] GI:9937311; contains Pfam profile
           PF00079: Serpin (serine protease inhibitor)
          Length = 407

 Score = 60.5 bits (140), Expect = 9e-10
 Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 7/142 (4%)
 Frame = -1

Query: 638 AIYFKGAWSSKFDERMTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPYK- 462
           A+YFKGAW   FD+ MT D+ F++   K++ VP M  R   K    A    +++ +PY+ 
Sbjct: 199 ALYFKGAWEKAFDKSMTRDKPFHLLNGKSVSVPFM--RSYEKQFIEAYDGFKVLRLPYRQ 256

Query: 461 -----GDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEV-DLYLPKFKIETE 300
                  + S+ + LP  K  +  L E +        +    Y  +V D  +PKFKIE  
Sbjct: 257 GRDDTNREFSMYLYLPDKKGELDNLLERITSNPGFLDSHIPEYRVDVGDFRIPKFKIEFG 316

Query: 299 TNLKDVLSNMNVNKIFNNDAQI 234
                V ++  +N   +  A I
Sbjct: 317 FEASSVFNDFELNVSLHQKALI 338


>At1g47710.1 68414.m05302 serpin, putative / serine protease
           inhibitor, putative similar to phloem serpin-1
           [Cucurbita maxima] GI:9937311; contains Pfam profile
           PF00079: Serpin (serine protease inhibitor)
          Length = 391

 Score = 57.6 bits (133), Expect = 6e-09
 Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
 Frame = -1

Query: 638 AIYFKGAWSSKFDERMTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPY-K 462
           A+YFKG W+ KFDE +T + +F++     +  P M  +   K   SA    +++ +PY +
Sbjct: 170 ALYFKGTWNEKFDESLTQEGEFHLLDGNKVTAPFMTSK--KKQYVSAYDGFKVLGLPYLQ 227

Query: 461 GD---QSSLIVVLPKDKDGITQ-LQEALKDPKTLETAQQSMYSTEVDLYLPKFKIETETN 294
           G    Q S+   LP   +G++  L + +  P  L+           +  +PKFK     +
Sbjct: 228 GQDKRQFSMYFYLPDANNGLSDLLDKIVSTPGFLDNHIPRRQVKVREFKIPKFKFSFGFD 287

Query: 293 LKDVLSNMNVNKIFNNDAQITRLLK----GESLSVSEAIQK 183
             +VL  + +   F+ +  +T +++    G++L VS    K
Sbjct: 288 ASNVLKGLGLTSPFSGEEGLTEMVESPEMGKNLCVSNIFHK 328


>At1g64030.1 68414.m07252 serpin family protein / serine protease
           inhibitor family protein similar to phloem serpin-1
           [Cucurbita maxima] GI:9937311, serpin [Triticum
           aestivum] GI:871551; contains Pfam profile PF00079:
           Serpin (serine protease inhibitor)
          Length = 385

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 8/136 (5%)
 Frame = -1

Query: 638 AIYFKGAWSSKFDERMTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAALNA-QLIEIPY- 465
           A+ FKGAW   F++  T D DFY+    ++ VP M     Y+     A +  +++ +PY 
Sbjct: 171 ALSFKGAWKRPFEKYYTRDNDFYLVNGTSVSVPFM---SSYENQYVRAYDGFKVLRLPYQ 227

Query: 464 KGDQS-----SLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEVDLY-LPKFKIET 303
           +G        S+   LP  KDG+  L E +        +    Y  E++ + +PKFKIE 
Sbjct: 228 RGSDDTNRKFSMYFYLPDKKDGLDDLLEKMASTPGFLDSHIPTYRDELEKFRIPKFKIEF 287

Query: 302 ETNLKDVLSNMNVNKI 255
             ++  VL  + +  +
Sbjct: 288 GFSVTSVLDRLGLRSM 303


>At2g35580.1 68415.m04357 serpin family protein / serine protease
           inhibitor family protein similar to protein zx [Hordeum
           vulgare subsp. vulgare] GI:19071, serpin [Triticum
           aestivum] GI:1885350; contains Pfam profile PF00079:
           Serpin (serine protease inhibitor)
          Length = 374

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 6/131 (4%)
 Frame = -1

Query: 638 AIYFKGAWSSKFDERMTSDRDFYVSKDKTIKVPMMYK---RGDYKYGESAALNAQLIEIP 468
           A++F G W S+FD  +T D DF++     ++VP M     R  + Y     +N Q     
Sbjct: 171 ALFFNGRWDSQFDPSLTKDSDFHLLDGTKVRVPFMTGASCRYTHVYEGFKVINLQYRRGR 230

Query: 467 YKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEV---DLYLPKFKIETET 297
                 S+ + LP +KDG+  + E L   +      + + S      +L +P+FK +   
Sbjct: 231 EDSRSFSMQIYLPDEKDGLPSMLERLASTRGFLKDNEVLPSHSAVIKELKIPRFKFDFAF 290

Query: 296 NLKDVLSNMNV 264
              + L    +
Sbjct: 291 EASEALKGFGL 301


>At1g62170.1 68414.m07013 serpin family protein / serine protease
           inhibitor family protein similar to phloem serpin-1
           GI:9937311 from [Cucurbita maxima]; contains Pfam
           profile PF00079: Serpin (serine protease inhibitor)
          Length = 433

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 33/137 (24%), Positives = 60/137 (43%), Gaps = 8/137 (5%)
 Frame = -1

Query: 638 AIYFKGAWSSKFDERMTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAALNA-QLIEIPYK 462
           A+YFKG W  K+ + MT  + FY+    ++ VP M     ++    AA +  +++ +PY+
Sbjct: 235 ALYFKGTWEEKYSKSMTKCKPFYLLNGTSVSVPFM---SSFEKQYIAAYDGFKVLRLPYR 291

Query: 461 GDQS------SLIVVLPKDKDGITQLQEAL-KDPKTLETAQQSMYSTEVDLYLPKFKIET 303
             +       ++ + LP  K  +  L E +   P  L++             +PKFKIE 
Sbjct: 292 QGRDNTNRNFAMYIYLPDKKGELDDLLERMTSTPGFLDSHNPERRVKVGKFRIPKFKIEF 351

Query: 302 ETNLKDVLSNMNVNKIF 252
                   S+  ++  F
Sbjct: 352 GFEASSAFSDFELDVSF 368


>At1g63280.1 68414.m07154 serpin-related / serine protease
           inhibitor-related similar to protein zx [Hordeum vulgare
           subsp. vulgare] GI:19071, serpin [Triticum aestivum]
           GI:1885346
          Length = 120

 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 17/35 (48%), Positives = 24/35 (68%)
 Frame = -1

Query: 638 AIYFKGAWSSKFDERMTSDRDFYVSKDKTIKVPMM 534
           A+YFKGAW +KFD+  T D +F+  K+  + VP M
Sbjct: 48  ALYFKGAWENKFDKSSTKDNEFHQGKE--VHVPFM 80


>At1g51330.1 68414.m05772 serpin-related / serine protease
           inhibitor-related similar to serpin [Hordeum vulgare
           subsp. vulgare] CAA64599.1  GI:1197577
          Length = 193

 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 19/43 (44%), Positives = 27/43 (62%)
 Frame = -1

Query: 638 AIYFKGAWSSKFDERMTSDRDFYVSKDKTIKVPMMYKRGDYKY 510
           A+YFKGAW +KF + MT  + F++   K + VP M K  + KY
Sbjct: 71  ALYFKGAWENKFGKSMTIHKPFHLVNGKQVLVPFM-KSYERKY 112


>At3g15970.1 68416.m02019 Ran-binding protein 1 domain-containing
           protein / RanBP1 domain-containing protein similar to
           Ran binding protein [Homo sapiens] GI:624232; contains
           Pfam profile PF00638: RanBP1 domain
          Length = 465

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
 Frame = -1

Query: 632 YFKGAWSSKFDERMTSDRDFYVSKDKTIKVPM-MYKRGDYKYGESAAL--NAQLIEIPYK 462
           Y +G W     ER   +    +S  +  K  + M  +G+Y+   +A+L    +L ++  K
Sbjct: 344 YLEGGWK----ERGKGELKVNISTTENRKARLVMRSKGNYRLTLNASLYPEMKLAKMDKK 399

Query: 461 GDQSSLIVVLPKDKDGITQLQEALKDPKTLE 369
           G   + +  +   KDG++ L    KDP  +E
Sbjct: 400 GITFACVNSVSDAKDGLSTLALKFKDPTVVE 430


>At3g07525.2 68416.m00898 autophagocytosis-associated family protein
           contains autophagocytosis associated protein C-terminal
           domain, Pfam:PF03987
          Length = 226

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 578 DFYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIP 468
           DF++    + KVP++Y RG    GE  AL+    ++P
Sbjct: 110 DFHIVYSASYKVPVLYFRGYCSGGEPLALDVIKKDVP 146


>At3g07525.1 68416.m00897 autophagocytosis-associated family protein
           contains autophagocytosis associated protein C-terminal
           domain, Pfam:PF03987
          Length = 225

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 578 DFYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIP 468
           DF++    + KVP++Y RG    GE  AL+    ++P
Sbjct: 109 DFHIVYSASYKVPVLYFRGYCSGGEPLALDVIKKDVP 145


>At5g46290.1 68418.m05698 3-oxoacyl-[acyl-carrier-protein] synthase
           I identical to Swiss-Prot:P52410
           3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast
           precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I)
           (KAS I) [Arabidopsis thaliana]
          Length = 473

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
 Frame = -1

Query: 407 QLQEALKDPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNN--DAQI 234
           Q  + + + + L   Q+S  S          K ET+   + V++ M +  +F N  DA  
Sbjct: 24  QSHQLITNARPLRRQQRSFISASASTVSAP-KRETDPKKRVVITGMGLVSVFGNDVDAYY 82

Query: 233 TRLLKGES 210
            +LL GES
Sbjct: 83  EKLLSGES 90


>At1g31160.1 68414.m03812 zinc-binding protein, putative / protein
           kinase C inhibitor, putative similar to 14 kDa
           zinc-binding protein (Protein kinase C inhibitor, PKCI)
           [Zea mays] Swiss-Prot:P42856
          Length = 187

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 11/36 (30%), Positives = 26/36 (72%)
 Frame = -1

Query: 443 IVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEV 336
           ++V+PK +DG+T L +A  +P+ +E   Q ++++++
Sbjct: 111 VLVIPKLRDGLTSLGKA--EPRHVEVLGQLLHASKI 144


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,771,925
Number of Sequences: 28952
Number of extensions: 212925
Number of successful extensions: 559
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 552
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1314848736
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -