Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0088
         (676 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.75 
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   1.7  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    23   3.0  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    22   4.0  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    22   4.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.0  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   9.2  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 7/20 (35%), Positives = 16/20 (80%)
 Frame = +2

Query: 203 VVHVSTDSTLYSLWLNIVLD 262
           ++HVST + + ++W+N V++
Sbjct: 442 IIHVSTSAYVATVWINSVIN 461


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -2

Query: 150 GHGEIGVLWSCV*TDSAKTSTTVTKPSILICTIRK 46
           GH +    W  +   S+  ++  T P I+ C +RK
Sbjct: 77  GHPQWPFAWGSLXRSSSPQTSAPTGPPIVRCALRK 111


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -2

Query: 576 VCCLRLGCVWGLPVEAVTNRFGF 508
           +CC   GC+ G P      R GF
Sbjct: 61  ICCGPFGCLVGTPETLRCQREGF 83


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 407 KAPRLLAIRLNGREICNANNPQPA 478
           K  +L+    NG+E C + NP  A
Sbjct: 173 KVQQLITEYFNGKEPCRSINPDEA 196


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 407 KAPRLLAIRLNGREICNANNPQPA 478
           K  +L+    NG+E C + NP  A
Sbjct: 173 KVQQLITEYFNGKEPCRSINPDEA 196


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 180 DPGVSYSKTFGHGEIGVLWS 121
           DP V   +  G   IG+LW+
Sbjct: 812 DPAVLQCEAKGEKPIGILWN 831


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +1

Query: 343 DEDQSRASNGSQIFRPIQYFEQSSSSFSH 429
           +E+++    G  I R + YF+   S+FS+
Sbjct: 321 EEERNSHCLGGTITRTMWYFQICGSAFSY 349


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,739
Number of Sequences: 336
Number of extensions: 3789
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)