Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0087
(568 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 196 8e-51
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 196 8e-51
SB_56| Best HMM Match : Actin (HMM E-Value=0) 196 8e-51
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 196 1e-50
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 195 2e-50
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 194 3e-50
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 171 3e-43
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 70 2e-12
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 62 3e-10
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 38 0.004
SB_54| Best HMM Match : Actin (HMM E-Value=0) 33 0.16
SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0) 29 2.0
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 2.0
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_8479| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_50207| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_20432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_20112| Best HMM Match : EGF (HMM E-Value=0) 27 8.1
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_26480| Best HMM Match : EGF (HMM E-Value=0) 27 8.1
SB_22697| Best HMM Match : Hirudin (HMM E-Value=3.2) 27 8.1
SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 196 bits (479), Expect = 8e-51
Identities = 92/95 (96%), Positives = 94/95 (98%)
Frame = -1
Query: 568 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP*TMKIKIIAPPERKYSVW 389
SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVW
Sbjct: 244 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVW 303
Query: 388 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
IGGSILASLSTFQQMWISKQEYDESGP+IVHRKCF
Sbjct: 304 IGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 338
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 196 bits (479), Expect = 8e-51
Identities = 92/95 (96%), Positives = 94/95 (98%)
Frame = -1
Query: 568 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP*TMKIKIIAPPERKYSVW 389
SIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVW
Sbjct: 282 SIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVW 341
Query: 388 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 196 bits (479), Expect = 8e-51
Identities = 92/95 (96%), Positives = 94/95 (98%)
Frame = -1
Query: 568 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP*TMKIKIIAPPERKYSVW 389
SIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVW
Sbjct: 281 SIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVW 340
Query: 388 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 341 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 196 bits (478), Expect = 1e-50
Identities = 92/95 (96%), Positives = 94/95 (98%)
Frame = -1
Query: 568 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP*TMKIKIIAPPERKYSVW 389
SIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVW
Sbjct: 282 SIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVW 341
Query: 388 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 195 bits (475), Expect = 2e-50
Identities = 90/95 (94%), Positives = 94/95 (98%)
Frame = -1
Query: 568 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP*TMKIKIIAPPERKYSVW 389
SIMKCDVDIRKDLYANTV+SGGTTMYPG+ADRMQKEI+ALAP TMKIKIIAPPERKYSVW
Sbjct: 255 SIMKCDVDIRKDLYANTVMSGGTTMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVW 314
Query: 388 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
IGGSILASLSTFQQMWISKQEYDESGP+IVHRKCF
Sbjct: 315 IGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 349
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 194 bits (474), Expect = 3e-50
Identities = 91/95 (95%), Positives = 94/95 (98%)
Frame = -1
Query: 568 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP*TMKIKIIAPPERKYSVW 389
SIMKCDVDIRKDLYANTVLSGG+TM+PGIADRMQKEI+ALAP TMKIKIIAPPERKYSVW
Sbjct: 281 SIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVW 340
Query: 388 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 341 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 171 bits (416), Expect = 3e-43
Identities = 78/94 (82%), Positives = 86/94 (91%)
Frame = -1
Query: 565 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP*TMKIKIIAPPERKYSVWI 386
IMKCDVDIRKDLY+N VLSGG+TM+PGIADRMQKEI LA +MK+K+IAPPERKYSVWI
Sbjct: 56 IMKCDVDIRKDLYSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWI 115
Query: 385 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
GGSILASLSTFQQMWI+K+EY E GP IVHRKCF
Sbjct: 116 GGSILASLSTFQQMWIAKEEYHEYGPPIVHRKCF 149
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 69.7 bits (163), Expect = 2e-12
Identities = 40/114 (35%), Positives = 61/114 (53%), Gaps = 16/114 (14%)
Frame = -1
Query: 565 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITA----------------LAP*TM 434
I C +D+R+ LY N VLSGG+TM+ R+Q++I + P +
Sbjct: 231 IQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPI 290
Query: 433 KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THR 272
+ ++I+ ++Y+VW GGS+LAS F + +K +YDE GPSI F HR
Sbjct: 291 ETQVISHHMQRYAVWFGGSMLASTPEFYSVCHTKADYDEHGPSICRHNPF-LHR 343
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 62.1 bits (144), Expect = 3e-10
Identities = 27/72 (37%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Frame = -1
Query: 568 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP*TMKIKII---APPERKY 398
S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P +M++K+I + E+++
Sbjct: 159 SVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRLKLISNNSSVEKRF 218
Query: 397 SVWIGGSILASL 362
+ WIGGSILASL
Sbjct: 219 NPWIGGSILASL 230
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Frame = -1
Query: 568 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL--AP------*TMKIKIIAP 413
S++ C +D RK L N VL GGT M PG R+ +EI L +P +K+ P
Sbjct: 65 SLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQP 124
Query: 412 P-ERKYSVWIGGSILASLSTFQQMWISKQEYDE 317
P + W+GG+I SL +++ Y +
Sbjct: 125 PVNANITAWLGGAIFGSLEVLADRSTTRERYQQ 157
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 48.0 bits (109), Expect = 5e-06
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = -1
Query: 568 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL 449
+I D+D R + Y + VLSGG+TMYPG+ R+++EI L
Sbjct: 285 TIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREIKQL 324
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = -1
Query: 538 KDLYANTVLSGGTTMYPGIADRMQKEITA-LAP*TMKIKIIAPPERKYSVWIGGSILAS- 365
K LY VL G T+ Q +TA KI+I PP RK+ V++GG++LA
Sbjct: 322 KQLYLERVLKGDTSKLSSGMGMEQIPLTADYLLQKFKIRIEDPPRRKHMVFMGGAVLADI 381
Query: 364 LSTFQQMWISKQEYDESG 311
+ W++++EY+E G
Sbjct: 382 MKDKDSFWMTRKEYEEKG 399
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 38.3 bits (85), Expect = 0.004
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = -1
Query: 568 SIMKCDVDIRKDLYANTVLSGGTTMYPG 485
+I K D+D+R+ LY+N VLSGG+T++ G
Sbjct: 264 AIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 33.1 bits (72), Expect = 0.16
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -1
Query: 568 SIMKCDVDIRKDLYANTVLSG 506
SI KCD+D+R +L+ N VLSG
Sbjct: 2326 SIKKCDIDLRAELFHNIVLSG 2346
>SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 641
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -2
Query: 558 SATWTSVRTCTPTQYC-PVVPPCTL 487
+ T T + TCTP+Q C P VP C L
Sbjct: 304 TVTTTKLATCTPSQTCYPNVPACVL 328
>SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0)
Length = 1066
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 357 PSNRCGSRNRSTTSLAPPLYTGSASK--RTARRCLQQPAAGC 238
P N+ G++ R +L P++TGS + RT + P+A C
Sbjct: 879 PGNQAGNKTRPLRALRSPIHTGSTLEVDRTRQGTRPDPSARC 920
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +3
Query: 375 IDPPIHTEYFLSGGAMILIFIVYGARAVISFCIRSAIPGYMV-VPPD-NTVLAYKSLRMS 548
+DPP+ +Y L+GG ++ + FCI G++V PP+ N+ + R++
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCI---FQGFVVPTPPECNSAIVLPDARIT 814
Query: 549 TS 554
S
Sbjct: 815 AS 816
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 523 NTVLSGGTTMYPGIADRMQKEITALAP 443
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_8479| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = -2
Query: 390 GSVDRSSPPSLPSNRCGSRNRS----TTSLAPPLYTGSASKRTARRC 262
GS+ SP S P +R GSR R+ T+S A + +T ++C
Sbjct: 338 GSIAPPSPTSTPRSRTGSRTRTPPTPTSSRASSRGSARGGAKTTKKC 384
>SB_50207| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/37 (29%), Positives = 15/37 (40%)
Frame = -2
Query: 360 LPSNRCGSRNRSTTSLAPPLYTGSASKRTARRCLQQP 250
L C SR + P Y G RT ++C +P
Sbjct: 118 LVKRTCNSRKKKKPEKRPSSYNGDTDYRTRKQCRYEP 154
>SB_20432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 403
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -2
Query: 549 WTSVRTCTPTQYCPVVPPCTLESPTVCKR 463
W CT T Y V PCTL C R
Sbjct: 365 WDVTDPCTLTPYWDVTDPCTLTPLLECNR 393
>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
Length = 2112
Score = 27.5 bits (58), Expect = 8.1
Identities = 19/61 (31%), Positives = 23/61 (37%), Gaps = 3/61 (4%)
Frame = -2
Query: 375 SSPPSLPSNRCGSRNRSTTSLAPPLYTGSASKRTARRCLQQP---AAGCSIQACNLR*FN 205
SS P C R S + P YTGS + RC P A C +L F+
Sbjct: 684 SSDPCQHGGTCSDRIGSYSCYCRPGYTGSNCQHPLDRCANDPCRNGATCRRTGEDLSDFH 743
Query: 204 C 202
C
Sbjct: 744 C 744
>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3287
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -2
Query: 381 DRSSPPSLPSNRCGSRNRSTTSLAPPLYTGSASKRTARRCLQQP 250
D +S P RC R S T P YTG+A C QP
Sbjct: 744 DCASNPCAAYQRCIDRIDSYTCACPLGYTGNACDVNIDECASQP 787
>SB_26480| Best HMM Match : EGF (HMM E-Value=0)
Length = 1772
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 481 RFQGTWWYHRTILCWRTSPYGCPRR 555
RF+ WY R +C R YGCP R
Sbjct: 1613 RFRPQAWYSR--VCLRAEVYGCPDR 1635
>SB_22697| Best HMM Match : Hirudin (HMM E-Value=3.2)
Length = 306
Score = 27.5 bits (58), Expect = 8.1
Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = -3
Query: 566 HHEVRRGHP*GLVRQHSIVRWYHHVPWNRRPYAKGNHSSRPIDNED*DHCS-SREEVLRM 390
++EV G+P H + YH VP A G H P + H S S VLR
Sbjct: 205 YYEVPHGYPAAPHGYHEVPHGYHAVPHGYYEVAHGYHEV-PHGYHEVPHGSRSASWVLRS 263
Query: 389 DRWI 378
W+
Sbjct: 264 GSWV 267
>SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 402 STPYGSVDRSSPPSLPSNRCGSRNRSTTSLAPPLYTGSAS 283
STP +V PP PSN + ++ S +P T S S
Sbjct: 217 STPQATVQTPPPPPEPSNEPSTSSKPKASPSPSSITTSTS 256
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,628,470
Number of Sequences: 59808
Number of extensions: 374397
Number of successful extensions: 1076
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1337207630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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