Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0087
(568 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 199 1e-51
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 199 1e-51
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 199 1e-51
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 199 1e-51
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 199 1e-51
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 199 1e-51
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 199 1e-51
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 199 1e-51
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 199 1e-51
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 196 9e-51
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 191 3e-49
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 114 4e-26
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 106 1e-23
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 81 4e-16
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 73 1e-13
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 69 2e-12
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 44 8e-05
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 44 8e-05
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 30 1.3
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 30 1.3
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 30 1.3
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 5.4
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 5.4
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 5.4
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 5.4
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 199 bits (485), Expect = 1e-51
Identities = 93/95 (97%), Positives = 94/95 (98%)
Frame = -1
Query: 568 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP*TMKIKIIAPPERKYSVW 389
SIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVW
Sbjct: 282 SIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 341
Query: 388 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 199 bits (485), Expect = 1e-51
Identities = 93/95 (97%), Positives = 94/95 (98%)
Frame = -1
Query: 568 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP*TMKIKIIAPPERKYSVW 389
SIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVW
Sbjct: 282 SIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 341
Query: 388 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 199 bits (485), Expect = 1e-51
Identities = 93/95 (97%), Positives = 94/95 (98%)
Frame = -1
Query: 568 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP*TMKIKIIAPPERKYSVW 389
SIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVW
Sbjct: 282 SIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 341
Query: 388 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 199 bits (485), Expect = 1e-51
Identities = 93/95 (97%), Positives = 94/95 (98%)
Frame = -1
Query: 568 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP*TMKIKIIAPPERKYSVW 389
SIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVW
Sbjct: 282 SIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 341
Query: 388 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 199 bits (485), Expect = 1e-51
Identities = 93/95 (97%), Positives = 94/95 (98%)
Frame = -1
Query: 568 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP*TMKIKIIAPPERKYSVW 389
SIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVW
Sbjct: 282 SIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 341
Query: 388 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 199 bits (485), Expect = 1e-51
Identities = 93/95 (97%), Positives = 94/95 (98%)
Frame = -1
Query: 568 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP*TMKIKIIAPPERKYSVW 389
SIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVW
Sbjct: 282 SIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 341
Query: 388 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 199 bits (485), Expect = 1e-51
Identities = 93/95 (97%), Positives = 94/95 (98%)
Frame = -1
Query: 568 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP*TMKIKIIAPPERKYSVW 389
SIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVW
Sbjct: 238 SIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 297
Query: 388 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 298 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 199 bits (485), Expect = 1e-51
Identities = 93/95 (97%), Positives = 94/95 (98%)
Frame = -1
Query: 568 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP*TMKIKIIAPPERKYSVW 389
SIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVW
Sbjct: 268 SIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 327
Query: 388 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 328 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 199 bits (485), Expect = 1e-51
Identities = 93/95 (97%), Positives = 94/95 (98%)
Frame = -1
Query: 568 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP*TMKIKIIAPPERKYSVW 389
SIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVW
Sbjct: 282 SIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 341
Query: 388 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 196 bits (478), Expect = 9e-51
Identities = 93/95 (97%), Positives = 94/95 (98%)
Frame = -1
Query: 568 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP*TMKIKIIAPPERKYSVW 389
SIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVW
Sbjct: 282 SIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVW 340
Query: 388 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 341 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 191 bits (466), Expect = 3e-49
Identities = 90/95 (94%), Positives = 92/95 (96%)
Frame = -1
Query: 568 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP*TMKIKIIAPPERKYSVW 389
SIMKCDVDIRKDLYANTVLSGGT+M+PGIADRMQKEI LAP TMKIKIIAPPERKYSVW
Sbjct: 281 SIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVW 340
Query: 388 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 341 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 114 bits (275), Expect = 4e-26
Identities = 51/95 (53%), Positives = 70/95 (73%)
Frame = -1
Query: 568 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP*TMKIKIIAPPERKYSVW 389
SIMKCDVD+R+ LY+N VLSGGTT++ G DR+ E+ +AP KI+I A ER W
Sbjct: 280 SIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTW 339
Query: 388 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
IGGSI+ASL TF++MW+ K+EY++ G S +H++ F
Sbjct: 340 IGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 106 bits (254), Expect = 1e-23
Identities = 47/92 (51%), Positives = 63/92 (68%), Gaps = 3/92 (3%)
Frame = -1
Query: 553 DVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP*TMKIKIIAPP---ERKYSVWIG 383
D+DIR L++N ++GG ++ G +R+ + P T+K+++ A P ERKY WIG
Sbjct: 344 DIDIRPTLFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIG 403
Query: 382 GSILASLSTFQQMWISKQEYDESGPSIVHRKC 287
GSIL SL TFQQMW+SK EYDESG SIV +KC
Sbjct: 404 GSILGSLGTFQQMWVSKAEYDESGKSIVEKKC 435
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 81.4 bits (192), Expect = 4e-16
Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 13/98 (13%)
Frame = -1
Query: 565 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-----------AP*TMKIKII 419
I D+D R D Y + VLSGGTTMYPG+ R++KE+ L A KI+I
Sbjct: 286 IQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIE 345
Query: 418 APPERKYSVWIGGSILASL--STFQQMWISKQEYDESG 311
APP RK+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 346 APPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 73.3 bits (172), Expect = 1e-13
Identities = 39/104 (37%), Positives = 62/104 (59%), Gaps = 16/104 (15%)
Frame = -1
Query: 565 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA----------------P*TM 434
I +C +D+R+ LY N VLSGG+TM+ A ++Q+++ L+ P +
Sbjct: 311 IQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPI 370
Query: 433 KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 302
+++I+ ++Y+VW GGS+LAS S F Q+ +K EY E GPSI
Sbjct: 371 DVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 69.3 bits (162), Expect = 2e-12
Identities = 29/81 (35%), Positives = 54/81 (66%)
Frame = -1
Query: 568 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP*TMKIKIIAPPERKYSVW 389
+I++C +D R+ LY N L+GG ++ PGIA+++++E++ + P T+ ++ P R + +
Sbjct: 459 AILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPWRYNAAY 518
Query: 388 IGGSILASLSTFQQMWISKQE 326
+G I+AS STF+ IS Q+
Sbjct: 519 LGAQIVASASTFEDSCISLQQ 539
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 45.6 bits (103), Expect = 3e-05
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 10/91 (10%)
Frame = -1
Query: 565 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-AP*TMKIKIIAP----PERK 401
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 400 ----YSVWIGGSILASL-STFQQMWISKQEY 323
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 44.0 bits (99), Expect = 8e-05
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Frame = -1
Query: 568 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP*TMKIKI---IAPPERKY 398
SI +C +R L N ++ GG++ +PG +R+++E+ ++ P + + + P+
Sbjct: 296 SICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT-- 353
Query: 397 SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*T 278
W G L L+ + WI+++++DE G S+ F T
Sbjct: 354 HSWHCGQEL--LTASKVPWINRKDWDERGDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 44.0 bits (99), Expect = 8e-05
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Frame = -1
Query: 568 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP*TMKIKI---IAPPERKY 398
SI +C +R L N ++ GG++ +PG +R+++E+ ++ P + + + P+
Sbjct: 296 SICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT-- 353
Query: 397 SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*T 278
W G L L+ + WI+++++DE G S+ F T
Sbjct: 354 HSWHCGQEL--LTASKVPWINRKDWDERGDSLEFSNFFQT 391
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 389 PYGVLPLWRSNDLNLHCLWGESCD 460
P VLPL NDL+ WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 389 PYGVLPLWRSNDLNLHCLWGESCD 460
P VLPL NDL+ WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 389 PYGVLPLWRSNDLNLHCLWGESCD 460
P VLPL NDL+ WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 225 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 317
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 328 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 227
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 225 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 317
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 5.4
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -1
Query: 409 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 248
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,855,967
Number of Sequences: 27780
Number of extensions: 260342
Number of successful extensions: 713
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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