Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0084
(510 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0568 + 18837195-18837203,18837694-18837741,18837853-188379... 197 4e-51
03_02_0919 - 12392471-12392636,12392740-12392931,12393366-123934... 183 6e-47
07_01_0453 + 3420727-3420800,3421666-3421792,3422348-3422431,342... 132 2e-31
03_05_0776 + 27625122-27625415,27627226-27627273,27627455-276275... 131 3e-31
03_01_0081 + 645214-645228,645791-645856,645973-646142,646265-64... 126 8e-30
02_05_0941 + 32953065-32953089,32954252-32954406,32954486-329545... 35 0.033
01_05_0592 - 23483834-23484285,23484357-23484455,23484534-234847... 29 2.2
07_03_0778 + 21459483-21459778,21460531-21462784,21462992-21463432 29 2.9
11_03_0184 + 11317787-11318198,11318337-11318671,11318756-113190... 28 3.8
06_02_0169 - 12535102-12536062,12536949-12537646 27 8.8
06_02_0166 + 12522172-12522890,12523567-12524596 27 8.8
05_05_0381 + 24531622-24532918,24535334-24535468,24535592-245357... 27 8.8
04_01_0334 - 4395823-4395830,4398575-4399658,4401651-4402019 27 8.8
01_02_0070 - 10817675-10818024,10818228-10818893,10819094-108191... 27 8.8
>10_08_0568 +
18837195-18837203,18837694-18837741,18837853-18837912,
18837986-18838155,18838297-18838369,18838529-18838594,
18838685-18838768,18838950-18839027,18839122-18839205,
18839562-18839641,18839791-18839848,18839933-18840235,
18840361-18840531,18840972-18841204,18841303-18841705,
18841961-18842212,18842293-18842790,18843073-18843170,
18843314-18843413,18843653-18843798,18843912-18844068
Length = 1056
Score = 197 bits (481), Expect = 4e-51
Identities = 96/158 (60%), Positives = 116/158 (73%), Gaps = 1/158 (0%)
Frame = +3
Query: 39 SSYDWSRVRFTMDPSMCRAVNEAFIRLHDAGDIYRANRLVNWSCTLKSAISDIEVDKLEL 218
+S DWSR FTMD +AV EAFIRLH G IYR NR+VNW C+L++AISDIEVD EL
Sbjct: 217 ASLDWSRECFTMDEKRSKAVTEAFIRLHKEGLIYRDNRIVNWDCSLRTAISDIEVDYCEL 276
Query: 219 TGRTLLAIPGYEQKVEFGVLVHFAYKVEGSDEEVIVATTRVETMLGDVAVAVHPNDARYK 398
T TLL +PG V+FGV+++FAY +E E+IVATTR+ETMLGD A+AVHP D RYK
Sbjct: 277 TEETLLEVPGCSTLVQFGVIINFAYPLEEGLGEIIVATTRIETMLGDTAIAVHPQDERYK 336
Query: 399 HLIGKNLIHPICNLKMPIIAD-EYVDMAFGTGAVKITP 509
L GK+ +HP K+ II D + VD +FGTGAVKITP
Sbjct: 337 RLHGKHALHPFNGRKLKIICDSKLVDPSFGTGAVKITP 374
>03_02_0919 -
12392471-12392636,12392740-12392931,12393366-12393463,
12393719-12394219,12394287-12394532,12395627-12396029,
12396155-12396348,12396755-12396925,12397064-12397366,
12397463-12397520,12397678-12397757,12398910-12398987,
12399530-12399613,12399692-12399757,12399908-12399980,
12400080-12400249,12400368-12400427,12400632-12400679,
12401217-12401255,12401364-12401372
Length = 1012
Score = 183 bits (446), Expect = 6e-47
Identities = 88/149 (59%), Positives = 106/149 (71%), Gaps = 1/149 (0%)
Frame = +3
Query: 66 FTMDPSMCRAVNEAFIRLHDAGDIYRANRLVNWSCTLKSAISDIEVDKLELTGRTLLAIP 245
FTMD AV EAF+RLH G IYR NRLVNW CTL ++IS+IEVD ++L T+L IP
Sbjct: 211 FTMDEQRSNAVTEAFVRLHKEGLIYRDNRLVNWDCTLLTSISEIEVDHIDLKEETMLKIP 270
Query: 246 GYEQKVEFGVLVHFAYKVEGSDEEVIVATTRVETMLGDVAVAVHPNDARYKHLIGKNLIH 425
GY V+FGVL+ FAY +E E++VATTR+ETMLGD A+AVHP D RY HL G+ +H
Sbjct: 271 GYATPVQFGVLISFAYPLEEGLGEIVVATTRIETMLGDTAIAVHPEDKRYMHLHGRYAVH 330
Query: 426 PICNLKMPIIAD-EYVDMAFGTGAVKITP 509
P K+ II D E VD +FGTGAVKI P
Sbjct: 331 PFNGRKLKIICDAEIVDPSFGTGAVKIAP 359
>07_01_0453 +
3420727-3420800,3421666-3421792,3422348-3422431,
3422550-3422644,3423063-3423154,3423326-3423379,
3424221-3424273,3424472-3424539,3424777-3424852,
3425159-3425242,3425793-3425941,3426375-3426492,
3426583-3426699,3426950-3427170,3427503-3427536,
3427585-3427685,3427832-3427943,3428379-3428504,
3428579-3428716,3428808-3428858,3428938-3429050,
3430253-3430318,3430582-3430729,3430826-3430930,
3431017-3431118,3431495-3431567,3431647-3431813,
3431906-3432028
Length = 956
Score = 132 bits (318), Expect = 2e-31
Identities = 75/160 (46%), Positives = 99/160 (61%), Gaps = 3/160 (1%)
Frame = +3
Query: 39 SSYDWSRVRFTMDPSMCRAVNEAFIRLHDAGDIYRANRLVNWSCTLKSAISDIEVDKLEL 218
+S DWSR RFT+D + RAV EAF+RLH+ G IY+ + LVNWS L++A+SD+EV+ E
Sbjct: 141 ASCDWSRERFTLDEQLSRAVIEAFVRLHEKGLIYQGSYLVNWSPNLQTAVSDLEVEYSE- 199
Query: 219 TGRTLLAIPGYEQKVEFGVLVHFAYKVEGS--DEEVIVATTRVETMLGDVAVAVHPNDAR 392
E G L Y+V G D+ + +ATTR ET+ GDVA+AV+P D R
Sbjct: 200 ---------------EPGNLYFIKYRVAGGSRDDFMTIATTRPETLFGDVAIAVNPEDER 244
Query: 393 YKHLIGKNLIHPIC-NLKMPIIADEYVDMAFGTGAVKITP 509
Y +GK I P+ +PIIAD YVD FGTG +KI+P
Sbjct: 245 YAKYVGKLAIVPLTFGRHVPIIADRYVDPEFGTGVLKISP 284
>03_05_0776 +
27625122-27625415,27627226-27627273,27627455-27627514,
27627633-27627802,27627901-27627973,27628096-27628161,
27628262-27628345,27628681-27628758,27629009-27629092,
27629835-27630137,27630227-27630397,27630971-27631161,
27631284-27631686,27632246-27632497,27632577-27633077,
27633181-27633278,27633400-27633499,27633722-27633867,
27633973-27634138
Length = 1095
Score = 131 bits (317), Expect = 3e-31
Identities = 64/105 (60%), Positives = 75/105 (71%), Gaps = 1/105 (0%)
Frame = +3
Query: 198 EVDKLELTGRTLLAIPGYEQKVEFGVLVHFAYKVEGSDEEVIVATTRVETMLGDVAVAVH 377
EVD LE+ T+L +PGY V+FGVL+ FAY +E E+IVATTR+ETMLGD A+AVH
Sbjct: 319 EVDYLEIKEETMLKVPGYNTTVQFGVLISFAYPLEEGLGEIIVATTRIETMLGDTAIAVH 378
Query: 378 PNDARYKHLIGKNLIHPICNLKMPIIAD-EYVDMAFGTGAVKITP 509
P D RYKHL G+ IHP K+ II D E VD FGTGAVKITP
Sbjct: 379 PEDGRYKHLHGRYAIHPFNGRKLKIICDAELVDPTFGTGAVKITP 423
>03_01_0081 +
645214-645228,645791-645856,645973-646142,646265-646319,
646434-646499,646604-646687,647091-647168,647425-647508,
648000-648302,648402-648572,649098-649288,649406-649808,
650368-650619,650696-651196,651306-651403,651810-651911,
652016-652178
Length = 933
Score = 126 bits (305), Expect = 8e-30
Identities = 61/105 (58%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
Frame = +3
Query: 198 EVDKLELTGRTLLAIPGYEQKVEFGVLVHFAYKVEGSDEEVIVATTRVETMLGDVAVAVH 377
EVD L++ T+L +PGY V+FGVL+ FAY +E E+IVATTR+ETMLGD ++VH
Sbjct: 206 EVDYLDIKEETMLKVPGYNTTVQFGVLISFAYPLEEGLGEIIVATTRIETMLGDTTISVH 265
Query: 378 PNDARYKHLIGKNLIHPICNLKMPIIAD-EYVDMAFGTGAVKITP 509
P D RYKHL G+ IHP K+ II D E VD FGTGAVKITP
Sbjct: 266 PEDNRYKHLHGRYAIHPFNGRKLKIICDAELVDPTFGTGAVKITP 310
>02_05_0941 +
32953065-32953089,32954252-32954406,32954486-32954587,
32955089-32955140,32955237-32955349,32955542-32955610,
32955942-32956049,32956517-32956661,32957245-32957476,
32957567-32957853,32957951-32958087,32958520-32958667,
32959464-32959595,32960239-32960367,32960707-32960834,
32960911-32961075,32961462-32961587,32962088-32962161,
32962285-32962534,32962875-32963054,32963128-32963361,
32964771-32964840,32965065-32965177,32965403-32965511,
32965639-32965688,32965823-32965889,32966131-32966203,
32966393-32966448,32966729-32966831,32967377-32967458,
32967717-32967779,32967918-32967977,32968356-32968448,
32968561-32968623,32968699-32968797
Length = 1363
Score = 35.1 bits (77), Expect = 0.033
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +3
Query: 48 DWSRVRFTMDPSMCRAVNEAFIRLHDAGDIYRANRLVNWSCTLKSAISDIEVDKLE 215
DW T+ P A E F ++ G IYR + V+WS + ++A+++ E++ E
Sbjct: 156 DWDNPYLTLSPEYEAAQLEVFGQMVMKGYIYRGRKPVHWSPSSRTALAEAELEYSE 211
>01_05_0592 -
23483834-23484285,23484357-23484455,23484534-23484702,
23485049-23485363,23485561-23485767,23485852-23486106,
23486575-23486736
Length = 552
Score = 29.1 bits (62), Expect = 2.2
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Frame = +3
Query: 174 LKSAISDIEVDKLELTGRTLLAIPGYEQK-----VEFGVLVHFAYKVEGSDEEVIVATT 335
L+ I +E DK ELT + A+ E + +F VLV+ K+EG+ +EV A T
Sbjct: 376 LEKRIKALEKDKGELTKKRDSALKDVEDRKIKSQAQFDVLVNKIKKLEGARDEVANAAT 434
>07_03_0778 + 21459483-21459778,21460531-21462784,21462992-21463432
Length = 996
Score = 28.7 bits (61), Expect = 2.9
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = +3
Query: 225 RTLLAIPGYEQK--VEFGVLVHFAYKVEGSDEEVIVATTRVETMLGDVAVAVHPNDARYK 398
R+L+ G+ + VE+ V +++AY +E E+ + A + T LG+ A+ +D+
Sbjct: 385 RSLIRRAGFRGQLGVEY-VNLYYAYALEKCMEKAVFAPKK--TSLGNFAMDSLNSDSPKN 441
Query: 399 HLIGKNLIHPI 431
HL G L+H +
Sbjct: 442 HLYGIQLMHSL 452
>11_03_0184 +
11317787-11318198,11318337-11318671,11318756-11319048,
11319125-11319483,11319549-11319748,11319823-11320012,
11320084-11320188,11320262-11320338,11320428-11320649
Length = 730
Score = 28.3 bits (60), Expect = 3.8
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Frame = +3
Query: 174 LKSAISDIEVDKLELTGRTLLAIPGYEQK-----VEFGVLVHFAYKVEGSDEEVIVA 329
L+ I +E DK EL + LA+ E + +F VLV K+EGS +E+ VA
Sbjct: 605 LEKQIQILENDKAELARQRNLALKEVEDRKIKSQAQFDVLVGKIKKLEGSRDELRVA 661
>06_02_0169 - 12535102-12536062,12536949-12537646
Length = 552
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 96 QLGTLMGPS*SGLWTSRRKNGSAAAEFGGRG 4
+LG L+G S LW S++K+G+AA G G
Sbjct: 447 KLGALVG-SIGFLWASQQKDGAAAGHLPGIG 476
>06_02_0166 + 12522172-12522890,12523567-12524596
Length = 582
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 96 QLGTLMGPS*SGLWTSRRKNGSAAAEFGGRG 4
+LG L+G S LW S++K+G+AA G G
Sbjct: 459 KLGALVG-SIGFLWASQQKDGAAAGHLPGIG 488
>05_05_0381 +
24531622-24532918,24535334-24535468,24535592-24535764,
24536029-24536239,24536287-24536554,24536664-24536814,
24536938-24537246
Length = 847
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 401 VFIPGIIRVDSHSHIPKHGFYSSSSHYHLLIRAFN 297
VF G+I ++ S G YS SSH +LL RA++
Sbjct: 714 VFSFGVIVLEIISGKRNRGVYSYSSHLNLLARAWS 748
>04_01_0334 - 4395823-4395830,4398575-4399658,4401651-4402019
Length = 486
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 401 LDRQEFDSSYLQSQDAHHC**ICGHGFR 484
+D E ++SYL ++ H+C +CG GF+
Sbjct: 306 VDVVELEASYLLARYTHYC-QVCGKGFK 332
>01_02_0070 -
10817675-10818024,10818228-10818893,10819094-10819124,
10820038-10820164,10820279-10820736
Length = 543
Score = 27.1 bits (57), Expect = 8.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 60 VRFTMDPSMCRAVNEAFIRLHDAGDIYRAN 149
+ F + S+CR ++HDAGD+ + N
Sbjct: 203 IYFVLVISLCRICRRKKYKIHDAGDLQQEN 232
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,123,838
Number of Sequences: 37544
Number of extensions: 282282
Number of successful extensions: 1029
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1095026320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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