Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0083
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   3.4  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   3.4  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   7.9  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +3

Query: 78  PWLRIITKRRG-SALNEPLVINPMENLKDAYQSSRTPPIWF 197
           PW+   T   G  A+NE +  N +  L D Y +   PPI +
Sbjct: 314 PWIVSFTNSEGLYAINE-IYDNALLALLDDYWNEYIPPILY 353


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +3

Query: 78  PWLRIITKRRG-SALNEPLVINPMENLKDAYQSSRTPPIWF 197
           PW+   T   G  A+NE +  N +  L D Y +   PPI +
Sbjct: 314 PWIVSFTNSEGLYAINE-IYDNALLALLDDYWNEYIPPILY 353


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 5/32 (15%), Positives = 18/32 (56%)
 Frame = +1

Query: 448 CPDSVLFASTSKFCNLQEDKRRQSLGAIPIFQ 543
           CP+ +++   +  C+  ++ +++   +  +FQ
Sbjct: 138 CPNGLVYNDKAGICSWPDEAKKKGCSSEEVFQ 169


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,771
Number of Sequences: 336
Number of extensions: 4311
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)