Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0082
(430 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 38 0.003
SB_27078| Best HMM Match : Kazal_2 (HMM E-Value=7.6e-07) 36 0.014
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.019
SB_57638| Best HMM Match : F5_F8_type_C (HMM E-Value=1.7e-11) 35 0.025
SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.076
SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.10
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 33 0.13
SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.41
SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.54
SB_7030| Best HMM Match : Kazal_2 (HMM E-Value=4.6e-08) 31 0.54
SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 30 0.94
SB_46753| Best HMM Match : Fimbrial_CS1 (HMM E-Value=1.1) 30 0.94
SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 1.2
SB_33509| Best HMM Match : Kazal_1 (HMM E-Value=2.3e-26) 29 1.2
SB_15403| Best HMM Match : CH (HMM E-Value=0) 29 1.2
SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 1.6
SB_9563| Best HMM Match : Kazal_1 (HMM E-Value=1.7e-07) 29 1.6
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 1.6
SB_37368| Best HMM Match : Kazal_1 (HMM E-Value=9.2e-09) 29 2.2
SB_23052| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_27871| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_32965| Best HMM Match : Kazal_1 (HMM E-Value=3.4e-19) 28 2.9
SB_50468| Best HMM Match : Kazal_1 (HMM E-Value=1.3e-15) 28 3.8
SB_13198| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0) 27 5.0
SB_3798| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_20440| Best HMM Match : SRP-alpha_N (HMM E-Value=1.4) 27 8.7
SB_32282| Best HMM Match : Laminin_G_2 (HMM E-Value=0) 27 8.7
SB_11598| Best HMM Match : Kazal_2 (HMM E-Value=2.1e-05) 27 8.7
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2
Query: 335 CPRICGPALHGEPVCATDGYIYPSLCKMRK 424
CP C PA + VCA+DG YPS+C+M +
Sbjct: 3002 CPPGCPPAEVSQRVCASDGLTYPSVCEMHR 3031
Score = 34.3 bits (75), Expect = 0.044
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 335 CPRICGPALHGEPVCATDGYIYPSLCKMRK 424
CP+IC L +PVCA+D YP+ C M++
Sbjct: 1580 CPKICPITL--DPVCASDNNTYPNECAMKQ 1607
Score = 32.3 bits (70), Expect = 0.18
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 335 CPRICGPALHGEPVCATDGYIYPSLCKMRKK 427
CP C P L PVC +DG Y S C M +K
Sbjct: 2625 CPPACKPTL--TPVCGSDGVTYESECGMIQK 2653
Score = 30.3 bits (65), Expect = 0.71
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 332 SCPRICGPALHGEPVCATDGYIYPSLCKMRKK 427
SCP C +P+CA+DG Y + C M+K+
Sbjct: 2153 SCPDDC--TNETKPICASDGQTYDNECLMQKR 2182
Score = 29.9 bits (64), Expect = 0.94
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 332 SCPRICGPALHGEPVCATDGYIYPSLCKMR 421
SCP CG +P+C ++ Y + C++R
Sbjct: 288 SCPSSCGDESLPQPICGSNNKTYANECELR 317
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 332 SCPRICGPALHGEPVCATDGYIYPSLCKMRKK 427
+CP C + +PVC TD Y + C MR++
Sbjct: 1134 ACPENCSSTV--DPVCGTDNNTYDNECLMRQQ 1163
Score = 28.7 bits (61), Expect = 2.2
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +2
Query: 368 EPVCATDGYIYPSLCKMRKK 427
+PVC +D YP+ C+MR++
Sbjct: 617 DPVCGSDSKTYPNECRMRQE 636
Score = 27.9 bits (59), Expect = 3.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 332 SCPRICGPALHGEPVCATDGYIYPSLCKMRKK 427
+CP C + +PVC +D Y + C MR++
Sbjct: 1205 ACPENCSSTV--DPVCGSDNNTYDNECLMRQQ 1234
Score = 26.6 bits (56), Expect = 8.7
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 371 PVCATDGYIYPSLCKMRK 424
PVC DG +P+ C+MR+
Sbjct: 1006 PVCTNDGKKFPNECQMRQ 1023
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +2
Query: 314 EASRDASCPRICGPALHGEPVCATDGYIYPSLCKMRKK 427
E SCP C P+ G+PVC +DG Y S C++RK+
Sbjct: 1675 EGGIKCSCPIYCPPS--GQPVCGSDGKSYGSECELRKE 1710
Score = 29.5 bits (63), Expect = 1.2
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 311 SEASRDASCPRICGPALHGEPVCATDGYIYPSLCKMRKK 427
S A+ CP C P+ +PVC DG Y +LC + ++
Sbjct: 571 SSANASCICPTNC-PS-DWDPVCGDDGVTYQNLCHLLRE 607
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 311 SEASRDASCPRICGPALHGEPVCATDGYIYPSLCKMR 421
++ S CP P PVC +DG Y + CK+R
Sbjct: 500 ADGSTTCQCPTDRCPK-EASPVCGSDGKTYENECKLR 535
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +2
Query: 314 EASRDASCPRICGPALHGEPVCATDGYIYPSLCKMR 421
+ S CP+ PVC TD YPS C M+
Sbjct: 354 DGSMKCVCPKPEECPYVNAPVCGTDDRTYPSECIMK 389
>SB_27078| Best HMM Match : Kazal_2 (HMM E-Value=7.6e-07)
Length = 54
Score = 35.9 bits (79), Expect = 0.014
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = +2
Query: 341 RICGPALHGEPVCATDGYIYPSLCKMR 421
R CG PVC TDG YPS CK+R
Sbjct: 3 RPCGDEKEAFPVCGTDGNDYPSRCKLR 29
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 35.5 bits (78), Expect = 0.019
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +2
Query: 320 SRDASCPRICGPALHGEPVCATDGYIYPSLCKMR 421
S CP IC LH PVC +DG +Y + C MR
Sbjct: 1362 SAQCVCPSIC--PLHYSPVCGSDGNMYSNECAMR 1393
Score = 34.3 bits (75), Expect = 0.044
Identities = 16/29 (55%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +2
Query: 335 CPRICGPALHG-EPVCATDGYIYPSLCKM 418
CP+ C PA +G E +C TDG YPS C+M
Sbjct: 52 CPQGC-PAPNGDETICGTDGISYPSPCEM 79
Score = 33.9 bits (74), Expect = 0.058
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 338 PRICGPALHGEPVCATDGYIYPSLCKMRK 424
P IC P + PVC +DG IY C++RK
Sbjct: 1756 PSICSPVI--SPVCGSDGKIYKDDCELRK 1782
Score = 30.7 bits (66), Expect = 0.54
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 314 EASRDASCPRICGPALHGEPVCATDGYIYPSLCKMR 421
+ S CP C PVC TDG Y + C+MR
Sbjct: 1288 DGSTSCKCPIFC--TYEYMPVCGTDGKTYGNKCEMR 1321
Score = 29.9 bits (64), Expect = 0.94
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 371 PVCATDGYIYPSLCKM 418
PVCA+DG YP++C M
Sbjct: 1823 PVCASDGQTYPNVCTM 1838
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 359 LHGEPVCATDGYIYPSLCKM 418
L PVCA+DG IYP+ M
Sbjct: 1975 LEYRPVCASDGKIYPNRMTM 1994
>SB_57638| Best HMM Match : F5_F8_type_C (HMM E-Value=1.7e-11)
Length = 502
Score = 35.1 bits (77), Expect = 0.025
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +2
Query: 365 GEPVCATDGYIYPSLCKMRK 424
G PVCA DG IY +LCKMR+
Sbjct: 415 GVPVCADDGLIYGNLCKMRQ 434
>SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4475
Score = 33.5 bits (73), Expect = 0.076
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 335 CPRICGPALHGEPVCATDGYIYPSLCKMRK 424
CP C P EPVC DG Y +LC++RK
Sbjct: 4237 CPSRCLP--DKEPVCGADGKTYRNLCEIRK 4264
>SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1822
Score = 33.1 bits (72), Expect = 0.10
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 326 DASCPRICGPALHGEPVCATDGYIYPSLCKMRK 424
+ C C PA + +CA+DG Y S C++ K
Sbjct: 46 ECRCTSTCSPAQPSDRLCASDGITYNSKCELNK 78
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 32.7 bits (71), Expect = 0.13
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 344 ICGPALHGE--PVCATDGYIYPSLCKMRKK 427
+C P E PVC TDG Y +LC +R K
Sbjct: 597 VCPPGCPSEVKPVCGTDGVTYDNLCSLRLK 626
Score = 29.1 bits (62), Expect = 1.6
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +2
Query: 335 CPRICGPALHGEPVCATDGYIYPSLCKMR 421
CPR C L PVC +DG Y + C MR
Sbjct: 1068 CPRRCPKKLM--PVCGSDGKTYNNECLMR 1094
>SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 31.1 bits (67), Expect = 0.41
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 317 ASRDASCPRICGPALHGEPVCATDGYIYPSLCKMRK 424
A ASC + H +PVC +DG YP+ C++ +
Sbjct: 73 AKGKASCECLSECPDHIKPVCGSDGVTYPNHCELHR 108
>SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 30.7 bits (66), Expect = 0.54
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = +2
Query: 335 CPRICGPALHGEPVCATDGYIYPSLCKMRK 424
CPR C P+ + + VCAT+G + +LC+++K
Sbjct: 326 CPRKC-PS-YVDQVCATNGETFDNLCRLKK 353
>SB_7030| Best HMM Match : Kazal_2 (HMM E-Value=4.6e-08)
Length = 286
Score = 30.7 bits (66), Expect = 0.54
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = +2
Query: 335 CPRICGPALHGEPVCATDGYIYPSLCKMRK 424
CPR C P+ + + VCAT+G + +LC+++K
Sbjct: 60 CPRKC-PS-YVDQVCATNGETFDNLCRLKK 87
>SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 6725
Score = 29.9 bits (64), Expect = 0.94
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 332 SCPRICGPALHGEPVCATDGYIYPSLCKMRK 424
SCP IC P+C +DG Y + C+M +
Sbjct: 5153 SCPDIC--TFEYSPLCGSDGKTYDNQCEMER 5181
>SB_46753| Best HMM Match : Fimbrial_CS1 (HMM E-Value=1.1)
Length = 982
Score = 29.9 bits (64), Expect = 0.94
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -1
Query: 421 PHLAERGVDVPVGGADGLPVQRRPANARTRSVARCLARRREDKEGSSGEEV 269
P +G D+ D L P + R R R ++R+D + SSGE++
Sbjct: 677 PEFEFKGEDIESDDDDALEAAVVPTSQRRRRSTRIKRQQRQDSDESSGEDL 727
>SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 320
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 332 SCPRICGPALHGEPVCATDGYIYPSLCKMRKK 427
+CP C + +PVC TD Y + C MR++
Sbjct: 160 ACPENCSSTV--DPVCGTDNNTYDNECLMRQQ 189
Score = 27.9 bits (59), Expect = 3.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 332 SCPRICGPALHGEPVCATDGYIYPSLCKMRKK 427
+CP C + +PVC +D Y + C MR++
Sbjct: 274 ACPENCSSTV--DPVCGSDNNTYDNECLMRQQ 303
Score = 26.6 bits (56), Expect = 8.7
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 371 PVCATDGYIYPSLCKMRK 424
PVC DG +P+ C+MR+
Sbjct: 32 PVCTNDGKKFPNECQMRQ 49
>SB_33509| Best HMM Match : Kazal_1 (HMM E-Value=2.3e-26)
Length = 143
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 332 SCPRICGPALHGEPVCATDGYIYPSLCKMRKK 427
+CP C + +PVC TD Y + C MR++
Sbjct: 26 ACPENCSSTV--DPVCGTDNNTYDNECLMRQQ 55
>SB_15403| Best HMM Match : CH (HMM E-Value=0)
Length = 1907
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 332 SCPRICGPALHGEPVCATDGYIYPSLCKMRKKT 430
+CP L VC TDG Y +LC++R ++
Sbjct: 1306 TCPDPAACPLVKSRVCGTDGITYDNLCRLRAES 1338
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = +2
Query: 314 EASRDASCPRICGPALHGE--PVCATDGYIYPSLC 412
+A D +C A E PVC +DG Y +LC
Sbjct: 713 QAGADGKTKCVCSAACTREYAPVCGSDGNTYNNLC 747
>SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 325
Score = 29.1 bits (62), Expect = 1.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 335 CPRICGPALHGEPVCATDGYIYPSLCKM 418
CP++C L PVC +D Y +LC +
Sbjct: 196 CPKVC--TLDYTPVCGSDNKTYANLCNL 221
Score = 28.7 bits (61), Expect = 2.2
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 335 CPRICGPALHGEPVCATDGYIYPSLC 412
CP+ C +P C TDG YP+ C
Sbjct: 279 CPKAC--TREYKPACGTDGNTYPNRC 302
Score = 27.9 bits (59), Expect = 3.8
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 335 CPRICGPALHGEPVCATDGYIYPSLCKMRK 424
CPR C L PVC TD Y ++C + +
Sbjct: 118 CPRACTRELM--PVCGTDQKTYDNMCLLER 145
>SB_9563| Best HMM Match : Kazal_1 (HMM E-Value=1.7e-07)
Length = 170
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 335 CPRICGPALHGEPVCATDGYIYPSLCKMRK 424
CPR C P+ + + VCAT+G + +LC ++K
Sbjct: 103 CPRKC-PS-YVDQVCATNGETFDNLCLLKK 130
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 335 CPRICGPALHGEPVCATDGYIYPSLCKMRK 424
CPR C + +PVC TDG Y + C +R+
Sbjct: 733 CPRQC--QVRFKPVCGTDGREYLNRCFLRR 760
>SB_37368| Best HMM Match : Kazal_1 (HMM E-Value=9.2e-09)
Length = 68
Score = 28.7 bits (61), Expect = 2.2
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2
Query: 329 ASCPRICGPALHGEPVCATDGYIYPSLCKMRKK 427
A+C C H PVC +D Y + C + ++
Sbjct: 6 ANCSFSCDDGFHQTPVCGSDDVTYANACTLDER 38
>SB_23052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 479
Score = 28.7 bits (61), Expect = 2.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 368 EPVCATDGYIYPSLCKM 418
EPVC TDG +P+LC +
Sbjct: 190 EPVCDTDGQQHPNLCSL 206
>SB_27871| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 816
Score = 28.7 bits (61), Expect = 2.2
Identities = 17/33 (51%), Positives = 18/33 (54%)
Frame = -1
Query: 427 LLPHLAERGVDVPVGGADGLPVQRRPANARTRS 329
LLP A +G PV A PVQ RPAN RS
Sbjct: 672 LLPKQAAQGKGGPVMNASSKPVQ-RPANVNRRS 703
>SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 28.3 bits (60), Expect = 2.9
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 368 EPVCATDGYIYPSLCKMRK 424
+PVC +DG Y ++CK+R+
Sbjct: 282 DPVCGSDGKNYDNVCKLRQ 300
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 28.3 bits (60), Expect = 2.9
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 332 SCPRICGPALHGEPV-CATDGYIYPSLC 412
SCP++CGP G PV C +D I P+ C
Sbjct: 1723 SCPKVCGP---GCPVQCCSDLNICPANC 1747
>SB_32965| Best HMM Match : Kazal_1 (HMM E-Value=3.4e-19)
Length = 69
Score = 28.3 bits (60), Expect = 2.9
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 335 CPRICGPALHGEPVCATDGYIYPSLCKMRKKT 430
C R C PA++ +PVC TDG Y + C + T
Sbjct: 24 CVRPC-PAIN-DPVCGTDGKTYGNECMLGAAT 53
>SB_50468| Best HMM Match : Kazal_1 (HMM E-Value=1.3e-15)
Length = 1724
Score = 27.9 bits (59), Expect = 3.8
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 335 CPRICGPALHGEPVCATDGYIYPSLCKMR 421
CP C PVC +DG YP+ C M+
Sbjct: 47 CPMAC--TREYAPVCGSDGKTYPTECVMQ 73
>SB_13198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = -1
Query: 379 ADGLPVQRRPANARTRSVA---RCLARRREDKEGS 284
AD P RR +N+R R+++ R L+RRR G+
Sbjct: 148 ADAEPSSRRRSNSRRRTISTRRRSLSRRRRSSSGA 182
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 27.5 bits (58), Expect = 5.0
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 14 RPLHPPRHDRAPRRLLAFTKSRLTSS 91
RP+ PPR RAP +A TK+ + S+
Sbjct: 2543 RPIQPPRLSRAPSVRMANTKAPMIST 2568
>SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 293
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 335 CPRICGPALHGEPVCATDGYIYPSLCKMRKKT 430
C R C PA++ PVC TDG Y + C + T
Sbjct: 44 CVRPC-PAIY-MPVCGTDGKTYGNKCMLGAAT 73
>SB_3798| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 27.1 bits (57), Expect = 6.6
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +2
Query: 347 CGPALHGEPVCATDGYIYPSLCKMRKKT 430
C + VC DG Y SLC++R T
Sbjct: 134 CNSSPADTEVCGADGVTYGSLCRLRVAT 161
>SB_20440| Best HMM Match : SRP-alpha_N (HMM E-Value=1.4)
Length = 526
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 104 VVIFEAACWLS-SCIAQHVPQEVSEDNSARLVLLRYSQKTHLLDRDQ 241
V IFE W C A+ E ++N + LVL+ + + H+ ++
Sbjct: 92 VEIFEQLVWRKYKCTARQGRAETGQENVSHLVLMSFRIRLHVTRHEE 138
>SB_32282| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
Length = 897
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 320 SRDASCPRI--CGPALHGEPVCATDGYIYPSLCK 415
SRD C C A+ GEP+CA Y LC+
Sbjct: 494 SRDCECHHNAPCHYAVSGEPICACPLGTYGRLCE 527
>SB_11598| Best HMM Match : Kazal_2 (HMM E-Value=2.1e-05)
Length = 79
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 335 CPRICGPALHGEPVCATDGYIYPSLCK 415
CP+ C ++ E CA DG Y ++C+
Sbjct: 34 CPKSC--PVYQEEYCANDGKTYSNMCE 58
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,820,513
Number of Sequences: 59808
Number of extensions: 166938
Number of successful extensions: 655
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 826502419
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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