Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0080
(494 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30532| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.52
SB_7536| Best HMM Match : DUF1401 (HMM E-Value=7.9) 31 0.52
SB_41997| Best HMM Match : RVT_1 (HMM E-Value=3) 30 0.91
SB_36028| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_54075| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_48543| Best HMM Match : Exo_endo_phos (HMM E-Value=7.8e-06) 29 1.6
SB_42334| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_33756| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0035) 29 1.6
SB_29013| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_27890| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_24690| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_23604| Best HMM Match : RVT_1 (HMM E-Value=4.6e-13) 29 1.6
SB_18718| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_12964| Best HMM Match : RVT_1 (HMM E-Value=5.6e-31) 29 1.6
SB_4338| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_2173| Best HMM Match : DUF1401 (HMM E-Value=6.3) 29 1.6
SB_50776| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_31163| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_2999| Best HMM Match : RVT_1 (HMM E-Value=5.6e-31) 29 1.6
SB_2489| Best HMM Match : RVT_1 (HMM E-Value=0.02) 29 1.6
SB_25002| Best HMM Match : Gemini_mov (HMM E-Value=2.4) 29 2.1
SB_9140| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_55599| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_11854| Best HMM Match : Neuromodulin (HMM E-Value=7.3) 29 2.1
SB_8907| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26) 29 2.8
SB_47354| Best HMM Match : RVT_1 (HMM E-Value=2e-07) 29 2.8
SB_43430| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_39367| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26) 29 2.8
SB_24451| Best HMM Match : BRF1 (HMM E-Value=7.4) 29 2.8
SB_20216| Best HMM Match : 7tm_1 (HMM E-Value=0) 28 3.7
SB_22354| Best HMM Match : 7tm_1 (HMM E-Value=0) 28 3.7
SB_38019| Best HMM Match : 7tm_1 (HMM E-Value=1e-12) 28 4.9
SB_9550| Best HMM Match : GPS (HMM E-Value=1.6e-11) 28 4.9
SB_1986| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_41244| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_1926| Best HMM Match : PH (HMM E-Value=1.4e-23) 27 6.4
SB_34463| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_17665| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_10477| Best HMM Match : DUF602 (HMM E-Value=1) 27 8.5
>SB_30532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 31.1 bits (67), Expect = 0.52
Identities = 20/67 (29%), Positives = 37/67 (55%)
Frame = +2
Query: 218 LVESKVVNLSNSIENSSSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRNLLHKKT 397
L E ++V L ++NS+++ +++ A+K + +L L +LPVA+ I F + + HK
Sbjct: 41 LQEKEIVKLQR-VQNSAAR--LIVGAKKRDAITPILKELHWLPVASRIDFKILTITHKAL 97
Query: 398 KEIDTEY 418
EY
Sbjct: 98 HNQAPEY 104
>SB_7536| Best HMM Match : DUF1401 (HMM E-Value=7.9)
Length = 180
Score = 31.1 bits (67), Expect = 0.52
Identities = 20/67 (29%), Positives = 37/67 (55%)
Frame = +2
Query: 218 LVESKVVNLSNSIENSSSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRNLLHKKT 397
L E ++V L ++NS+++ +++ A+K + +L L +LPVA+ I F + + HK
Sbjct: 41 LQEKEIVKLQR-VQNSAAR--LIVGAKKRDAITPILKELHWLPVASRIDFKILTITHKAL 97
Query: 398 KEIDTEY 418
EY
Sbjct: 98 HNQAPEY 104
>SB_41997| Best HMM Match : RVT_1 (HMM E-Value=3)
Length = 532
Score = 30.3 bits (65), Expect = 0.91
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +2
Query: 218 LVESKVVNLSNSIENSSSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRNLLHKKT 397
L E ++ L + NS+++ +++ A+K + +L L +LPVAT I F + + HK
Sbjct: 442 LQEKEIAKLQR-VRNSAAR--LIVGAKKRDAITPILKELHWLPVATRIDFKILTITHKAL 498
Query: 398 KEIDTEY 418
EY
Sbjct: 499 HNQAPEY 505
>SB_36028| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 29.9 bits (64), Expect = 1.2
Identities = 20/67 (29%), Positives = 36/67 (53%)
Frame = +2
Query: 218 LVESKVVNLSNSIENSSSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRNLLHKKT 397
L E +V L ++NS+++ +++ A+K + +L L +LPVA+ I F + + HK
Sbjct: 41 LQEKEVAKLQR-VQNSAAR--LIVGAKKRDAITPILKELHWLPVASRIDFKILTITHKAL 97
Query: 398 KEIDTEY 418
EY
Sbjct: 98 HNQAPEY 104
>SB_54075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 729
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +2
Query: 218 LVESKVVNLSNSIENSSSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRNLLHKKT 397
L E ++ L ++NS+++ +++ A+K + +L L +LPVA+ I F + + HK
Sbjct: 242 LQEKEIAKLQR-VQNSAAR--LIVGAKKRDAITPILKELHWLPVASRIDFKILTITHKAL 298
Query: 398 KEIDTEY 418
EY
Sbjct: 299 HNQAPEY 305
>SB_48543| Best HMM Match : Exo_endo_phos (HMM E-Value=7.8e-06)
Length = 768
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/66 (27%), Positives = 36/66 (54%)
Frame = +2
Query: 221 VESKVVNLSNSIENSSSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRNLLHKKTK 400
+E ++ L ++NS+++ +++ A+K + +L L +LPVA+ I F + + HK
Sbjct: 630 LEKEIAKLQR-VQNSAAR--LIVGAKKRDAITSILKELHWLPVASRIDFKILTITHKALH 686
Query: 401 EIDTEY 418
EY
Sbjct: 687 NQAPEY 692
>SB_42334| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +2
Query: 218 LVESKVVNLSNSIENSSSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRNLLHKKT 397
L E ++ L ++NS+++ +++ A+K + +L L +LPVA+ I F + + HK
Sbjct: 10 LQEKEIAKLQR-VQNSAAR--LIVGAKKRDAITPILKELHWLPVASRIDFKILTITHKAL 66
Query: 398 KEIDTEY 418
EY
Sbjct: 67 HNQAPEY 73
>SB_33756| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0035)
Length = 351
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 352 CYRQETQSCQHIRCCVCFLSFNNNPILRT 266
C+ QE +SC CC C FNNN + T
Sbjct: 310 CFMQE-ESCVDCLCCNCANPFNNNNVKLT 337
>SB_29013| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +2
Query: 218 LVESKVVNLSNSIENSSSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRNLLHKKT 397
L E ++ L ++NS+++ +++ A+K + +L L +LPVA+ I F + + HK
Sbjct: 53 LQEKEIAKLQR-VQNSAAR--LIVGAKKRDAITPILKELHWLPVASRIDFKILTITHKAL 109
Query: 398 KEIDTEY 418
EY
Sbjct: 110 HNQAPEY 116
>SB_27890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +2
Query: 218 LVESKVVNLSNSIENSSSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRNLLHKKT 397
L E ++ L ++NS+++ +++ A+K + +L L +LPVA+ I F + + HK
Sbjct: 26 LQEKEIAKLQR-VQNSAAR--LIVGAKKRDAITPILKELHWLPVASRIDFKILTITHKAL 82
Query: 398 KEIDTEY 418
EY
Sbjct: 83 HNQALEY 89
>SB_24690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +2
Query: 218 LVESKVVNLSNSIENSSSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRNLLHKKT 397
L E ++ L ++NS+++ +++ A+K + +L L +LPVA+ I F + + HK
Sbjct: 53 LQEKEIAKLQR-VQNSAAR--LIVGAKKRDAITPILKELHWLPVASRIDFKILTITHKAL 109
Query: 398 KEIDTEY 418
EY
Sbjct: 110 HNQAPEY 116
>SB_23604| Best HMM Match : RVT_1 (HMM E-Value=4.6e-13)
Length = 438
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +2
Query: 218 LVESKVVNLSNSIENSSSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRNLLHKKT 397
L E ++ L ++NS+++ +++ A+K + +L L +LPVA+ I F + + HK
Sbjct: 311 LQEKEIAKLQR-VQNSAAR--LIVGAKKRDAITPILKELHWLPVASRIDFKILTITHKAL 367
Query: 398 KEIDTEY 418
EY
Sbjct: 368 HNQAPEY 374
>SB_18718| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +2
Query: 218 LVESKVVNLSNSIENSSSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRNLLHKKT 397
L E ++ L ++NS+++ +++ A+K + +L L +LPVA+ I F + + HK
Sbjct: 53 LQEKEIAKLQR-VQNSAAR--LIVGAKKRDAITPILKELHWLPVASRIDFKILTITHKAL 109
Query: 398 KEIDTEY 418
EY
Sbjct: 110 HNQALEY 116
>SB_12964| Best HMM Match : RVT_1 (HMM E-Value=5.6e-31)
Length = 1273
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +2
Query: 218 LVESKVVNLSNSIENSSSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRNLLHKKT 397
L E ++ L ++NS+++ +++ A+K + +L L +LPVA+ I F + + HK
Sbjct: 517 LQEKEIAKLQR-VQNSAAR--LIVGAKKRDAITPILKELHWLPVASRIDFKILTITHKAL 573
Query: 398 KEIDTEY 418
EY
Sbjct: 574 HNQAPEY 580
>SB_4338| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 541
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +2
Query: 218 LVESKVVNLSNSIENSSSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRNLLHKKT 397
L E ++ L ++NS+++ +++ A+K + +L L +LPVA+ I F + + HK
Sbjct: 402 LQEKEIAKLQR-VQNSAAR--LIVGAKKRDAITPILKELHWLPVASRIDFKILTITHKAL 458
Query: 398 KEIDTEY 418
EY
Sbjct: 459 HNQAPEY 465
>SB_2173| Best HMM Match : DUF1401 (HMM E-Value=6.3)
Length = 275
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +2
Query: 218 LVESKVVNLSNSIENSSSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRNLLHKKT 397
L E ++ L ++NS+++ +++ A+K + +L L +LPVA+ I F + + HK
Sbjct: 145 LQEKEIAKLQR-VQNSAAR--LIVGAKKRDAITPILKELHWLPVASRIDFKILTITHKAL 201
Query: 398 KEIDTEY 418
EY
Sbjct: 202 HNQAPEY 208
>SB_50776| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 284
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +2
Query: 218 LVESKVVNLSNSIENSSSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRNLLHKKT 397
L E ++ L ++NS+++ +++ A+K + +L L +LPVA+ I F + + HK
Sbjct: 145 LQEKEIAKLQR-VQNSAAR--LIVGAKKRDAITPILKELHWLPVASRIDFKILTITHKAL 201
Query: 398 KEIDTEY 418
EY
Sbjct: 202 HNQAPEY 208
>SB_31163| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +2
Query: 218 LVESKVVNLSNSIENSSSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRNLLHKKT 397
L E ++ L ++NS+++ +++ A+K + +L L +LPVA+ I F + + HK
Sbjct: 10 LQEKEIAKLQR-VQNSAAR--LIVGAKKRDAITPILKELHWLPVASRIDFKILTITHKAL 66
Query: 398 KEIDTEY 418
EY
Sbjct: 67 HNQAPEY 73
>SB_2999| Best HMM Match : RVT_1 (HMM E-Value=5.6e-31)
Length = 630
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +2
Query: 218 LVESKVVNLSNSIENSSSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRNLLHKKT 397
L E ++ L ++NS+++ +++ A+K + +L L +LPVA+ I F + + HK
Sbjct: 491 LQEKEIAKLQR-VQNSAAR--LIVGAKKRDAITPILKELHWLPVASRIDFKILTITHKAL 547
Query: 398 KEIDTEY 418
EY
Sbjct: 548 HNQAPEY 554
>SB_2489| Best HMM Match : RVT_1 (HMM E-Value=0.02)
Length = 385
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +2
Query: 218 LVESKVVNLSNSIENSSSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRNLLHKKT 397
L E ++ L ++NS+++ +++ A+K + +L L +LPVA+ I F + + HK
Sbjct: 246 LQEKEIAKLQR-VQNSAAR--LIVGAKKRDAITPILKELHWLPVASRIDFKILTITHKAL 302
Query: 398 KEIDTEY 418
EY
Sbjct: 303 HNQAPEY 309
>SB_25002| Best HMM Match : Gemini_mov (HMM E-Value=2.4)
Length = 363
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -3
Query: 228 DSTSVVFLETDRGFELDSEDFIEVTVKGLNVVDSIFCVVPGSSVECAIP 82
D++S+V T+ +D DF +V+ L +S+ C+ AIP
Sbjct: 274 DASSLVSQRTEDRLSVDGRDFSNASVRSLRSCNSLPCMTENERSRNAIP 322
>SB_9140| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +2
Query: 218 LVESKVVNLSNSIENSSSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRNLLHKKT 397
L E ++ L ++NS+++ +++ A+K + +L L +LPVA+ I F + + HK
Sbjct: 10 LQEKEIAKLQR-VQNSAAR--LIVGAKKRDAITPILKELYWLPVASRIDFEILTITHKAL 66
Query: 398 KEIDTEY 418
EY
Sbjct: 67 HNQAPEY 73
>SB_55599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 988
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +2
Query: 218 LVESKVVNLSNSIENSSSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRNLLHKKT 397
L E ++ L ++NS+++ +++ A+K + +L L +LPVA+ I F + + HK
Sbjct: 402 LQEKEIAKLQR-VQNSAAR--LIVGAKKRDAITPILKELHWLPVASRIDFKILTITHKGL 458
Query: 398 KEIDTEY 418
EY
Sbjct: 459 HNQAPEY 465
>SB_11854| Best HMM Match : Neuromodulin (HMM E-Value=7.3)
Length = 531
Score = 29.1 bits (62), Expect = 2.1
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +1
Query: 22 NHYYNLYDFLSTNHYYSKRYRYSTFDRTTGN---HTKYRINNIQTL 150
N+ YN D STN+ YS YST D + N +TK R+ + + L
Sbjct: 67 NNDYNTSDDYSTNNDYSTNNDYSTSDEYSTNDDYNTKQRLQHQRRL 112
>SB_8907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 776
Score = 29.1 bits (62), Expect = 2.1
Identities = 18/66 (27%), Positives = 35/66 (53%)
Frame = +2
Query: 221 VESKVVNLSNSIENSSSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRNLLHKKTK 400
++ K + ++NS+++ +++ A+K + +L L +LPVAT I F + + HK
Sbjct: 651 LQGKKIAKLQRVQNSAAR--LIVGAKKRDAITPILKELHWLPVATKIDFKILIITHKALH 708
Query: 401 EIDTEY 418
EY
Sbjct: 709 NQAPEY 714
>SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26)
Length = 904
Score = 28.7 bits (61), Expect = 2.8
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +2
Query: 218 LVESKVVNLSNSIENSSSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRNLLHKKT 397
L E ++ L ++NS+++ +++ A+K + +L L +LPVA+ I F + + HK
Sbjct: 780 LQEKEIAKLLR-VQNSAAR--LIVGAKKRDAITPILKELHWLPVASRIDFKILTITHKAL 836
Query: 398 KEIDTEY 418
EY
Sbjct: 837 HNQAPEY 843
>SB_47354| Best HMM Match : RVT_1 (HMM E-Value=2e-07)
Length = 773
Score = 28.7 bits (61), Expect = 2.8
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +2
Query: 218 LVESKVVNLSNSIENSSSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRNLLHKKT 397
L E ++ L ++NS+++ +++ A+K + +L L +LPVA+ I F + + HK
Sbjct: 639 LQEKEIAKLQR-VQNSAAR--LIVGAKKGDANTPILKELHWLPVASRIDFKILTITHKAL 695
Query: 398 KEIDTEY 418
EY
Sbjct: 696 HNQAPEY 702
>SB_43430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 28.7 bits (61), Expect = 2.8
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +2
Query: 224 ESKVVNLSNSIENSSSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRNLLHKKTKE 403
E ++ L ++NS+++ +++ A+K + +L L +LPVA+ I F + + HK
Sbjct: 12 EKEIAKLQR-VQNSAAR--LIVGAKKRDAITPILKELHWLPVASRIDFKILTITHKALHN 68
Query: 404 IDTEY 418
EY
Sbjct: 69 QAPEY 73
>SB_39367| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26)
Length = 903
Score = 28.7 bits (61), Expect = 2.8
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +2
Query: 218 LVESKVVNLSNSIENSSSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRNLLHKKT 397
L E ++ L ++NS+++ +++ A+K + +L L +LPVA+ I F + + HK
Sbjct: 779 LQEKEIAKLLR-VQNSAAR--LIVGAKKRDAITPILKELHWLPVASRIDFKILTITHKAL 835
Query: 398 KEIDTEY 418
EY
Sbjct: 836 HNQAPEY 842
>SB_24451| Best HMM Match : BRF1 (HMM E-Value=7.4)
Length = 372
Score = 28.7 bits (61), Expect = 2.8
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 356 IIIFVLRNLLHKKTKEIDTEYEGYFDDAEVNKESPITPVARIAVP 490
+I F+LRN+L K E T + E+ SP TP++ + +P
Sbjct: 144 LIRFMLRNILTKMAAENATTSNEEGSNDEILVPSPSTPISTLIMP 188
>SB_20216| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 372
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -2
Query: 481 NSRHRSDRRFLINLSVIEIPFVLSVYFFGLLMQ*ISKNKY 362
++RH I+L IP VL V+F+G+++ + K K+
Sbjct: 200 HTRHHQTYFATISLVFFIIPLVLLVFFYGVVLITLGKRKF 239
>SB_22354| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 372
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -2
Query: 481 NSRHRSDRRFLINLSVIEIPFVLSVYFFGLLMQ*ISKNKY 362
++RH I+L IP VL V+F+G+++ + K K+
Sbjct: 200 HTRHHQTYFATISLVFFIIPLVLLVFFYGVVLITLGKRKF 239
>SB_38019| Best HMM Match : 7tm_1 (HMM E-Value=1e-12)
Length = 353
Score = 27.9 bits (59), Expect = 4.9
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = +2
Query: 209 NTTLVESKVVNLSNSIENSSSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRNLLH 388
N V V ++SNS NSS N V + E + V+ GF+ AT+I+ VL +
Sbjct: 3 NFEQVNWTVSSISNST-NSSKGNRDVEDMEYAIISFAVIIVGGFVSNATVILLVLAKRVR 61
Query: 389 KKT 397
KT
Sbjct: 62 WKT 64
>SB_9550| Best HMM Match : GPS (HMM E-Value=1.6e-11)
Length = 1771
Score = 27.9 bits (59), Expect = 4.9
Identities = 17/57 (29%), Positives = 33/57 (57%)
Frame = +2
Query: 218 LVESKVVNLSNSIENSSSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRNLLH 388
L E ++ L ++NS+++ +++ A+K + +L L +LPVAT I F + + H
Sbjct: 1638 LQEKEIAKLQR-VQNSAAR--LIVGAKKRDAITPILKELHWLPVATRIDFKILTITH 1691
>SB_1986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 989
Score = 27.9 bits (59), Expect = 4.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 367 KYYDSCYRQETQSCQHIRCCVCFLSFNNN 281
+Y +SCY E +C + CVC + + +N
Sbjct: 70 RYPESCYSSEVCACTCVCVCVCGVYYFDN 98
>SB_41244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 27.9 bits (59), Expect = 4.9
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +2
Query: 218 LVESKVVNLSNSIENSSSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRNLLHKKT 397
L E ++ L ++NS+++ ++ A+K + +L L +LPVA+ I F + + HK
Sbjct: 45 LQEKEIAKLQR-VQNSAAR--LIAGAKKRDAITPILKELHWLPVASRIDFKILTITHKAL 101
Query: 398 KEIDTEY 418
EY
Sbjct: 102 HNQAPEY 108
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 27.5 bits (58), Expect = 6.4
Identities = 25/98 (25%), Positives = 37/98 (37%), Gaps = 4/98 (4%)
Frame = +2
Query: 80 TGIAHSTELPGTTQNIESTTFKPFTV----TXXXXXXXXXXXXXXXRNTTLVESKVVNLS 247
TG + ST PGTT EST TV T T ES + +
Sbjct: 675 TGASESTVAPGTTVLPESTVSPGTTVATESTVTRGTTVASEGTDALVTTVSSESTLTPGT 734
Query: 248 NSIENSSSQNGVVIEAEKTYTASYVLAGLGFLPVATII 361
+ S++ G+ + +E T T +A G + T +
Sbjct: 735 TVLPKSTASPGITVASESTVTRGTTVASEGTDALVTTV 772
>SB_1926| Best HMM Match : PH (HMM E-Value=1.4e-23)
Length = 998
Score = 27.5 bits (58), Expect = 6.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -2
Query: 379 ISKNKYYDSCYRQETQSCQHIRCCVCFLSFNNN 281
+ +Y++S R+ QSC RC + NNN
Sbjct: 607 VKVKEYHESPMRRHNQSCHSSRCLLLNTLHNNN 639
>SB_34463| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 27.1 bits (57), Expect = 8.5
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +1
Query: 22 NHYYNLYDFLSTNHYYSKRYRYSTFDRTTGNHTKYRINNIQTL 150
N+ YN D STN+ YS YST D +TK R+ + Q L
Sbjct: 57 NNDYNTSDDYSTNNDYSTSDDYSTND---DYNTKQRLQHQQRL 96
>SB_17665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 27.1 bits (57), Expect = 8.5
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +2
Query: 245 SNSIENSSSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRNLLHKKTKEI 406
SN +SS G A T V+ G + AT+I+ VL + KKT +
Sbjct: 12 SNIFNGTSSSKGYQRYALATIVPLAVILVFGIVSNATVILLVLAKRVPKKTMNL 65
>SB_10477| Best HMM Match : DUF602 (HMM E-Value=1)
Length = 429
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 380 LLHKKTKEIDTEYEGYFDDAEVNKESPITPV 472
+ H+K K + T+Y G D A ++ +TPV
Sbjct: 32 IFHEKMKYVCTQYNGIKDTAFTDENLTLTPV 62
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,778,677
Number of Sequences: 59808
Number of extensions: 263909
Number of successful extensions: 777
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1062812967
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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