Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0080
         (494 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D17550-1|BAA04488.1| 1235|Drosophila melanogaster tyrosine kinas...    33   0.28 
AE014296-868|AAF47916.2| 1233|Drosophila melanogaster CG7525-PA ...    33   0.28 
AF037164-1|AAD02091.1|  724|Drosophila melanogaster receptor tyr...    30   2.0  
AE013599-1644|AAF58420.2|  724|Drosophila melanogaster CG4007-PA...    30   2.0  
AB001420-1|BAA20134.1|  714|Drosophila melanogaster neurospecifi...    30   2.0  
AE014298-1977|AAF48333.2| 1103|Drosophila melanogaster CG32611-P...    29   2.6  

>D17550-1|BAA04488.1| 1235|Drosophila melanogaster tyrosine kinase
           protein.
          Length = 1235

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 17/73 (23%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
 Frame = +2

Query: 266 SSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRN-LLHKKTKEIDTEYEGYFDDAE 442
           +++  + +E  +    + VL  +G +P+A II++++RN ++ ++ K+ +      FD   
Sbjct: 715 ANERDLNMEMRRMNLVTLVLVAVGVIPLAAIILYLVRNFVIRRRAKQSEV-----FDVC- 768

Query: 443 VNKESPITPVARI 481
           +  + PI+PV ++
Sbjct: 769 ITDQQPISPVKKV 781


>AE014296-868|AAF47916.2| 1233|Drosophila melanogaster CG7525-PA
           protein.
          Length = 1233

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 17/73 (23%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
 Frame = +2

Query: 266 SSQNGVVIEAEKTYTASYVLAGLGFLPVATIIIFVLRN-LLHKKTKEIDTEYEGYFDDAE 442
           +++  + +E  +    + VL  +G +P+A II++++RN ++ ++ K+ +      FD   
Sbjct: 713 ANERDLNMEMRRMNLVTLVLVAVGVIPLAAIILYLVRNFVIRRRAKQSEV-----FDVC- 766

Query: 443 VNKESPITPVARI 481
           +  + PI+PV ++
Sbjct: 767 ITDQQPISPVKKV 779


>AF037164-1|AAD02091.1|  724|Drosophila melanogaster receptor
           tyrosine kinase protein.
          Length = 724

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
 Frame = +2

Query: 287 IEAEKTYTAS--YVLAGLGFLPVATIIIFVLRNLLHKKTKEID 409
           I+ EK +T S  ++LAG+GF+ + T+ + +L  L++K +K  D
Sbjct: 312 IKMEKFFTPSMIFLLAGIGFVAIVTLHLMIL--LVYKLSKHKD 352


>AE013599-1644|AAF58420.2|  724|Drosophila melanogaster CG4007-PA
           protein.
          Length = 724

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
 Frame = +2

Query: 287 IEAEKTYTAS--YVLAGLGFLPVATIIIFVLRNLLHKKTKEID 409
           I+ EK +T S  ++LAG+GF+ + T+ + +L  L++K +K  D
Sbjct: 312 IKMEKFFTPSMIFLLAGIGFVAIVTLHLMIL--LVYKLSKHKD 352


>AB001420-1|BAA20134.1|  714|Drosophila melanogaster neurospecific
           receptor tyrosinekinase protein.
          Length = 714

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
 Frame = +2

Query: 287 IEAEKTYTAS--YVLAGLGFLPVATIIIFVLRNLLHKKTKEID 409
           I+ EK +T S  ++LAG+GF+ + T+ + +L  L++K +K  D
Sbjct: 296 IKMEKFFTPSMIFLLAGIGFVAIVTLHLMIL--LVYKLSKHKD 336


>AE014298-1977|AAF48333.2| 1103|Drosophila melanogaster CG32611-PB
            protein.
          Length = 1103

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/52 (30%), Positives = 22/52 (42%)
 Frame = +1

Query: 10   EKAHNHYYNLYDFLSTNHYYSKRYRYSTFDRTTGNHTKYRINNIQTLHSNFN 165
            EK H   Y    FL  N+YY   Y Y+  +    N+  +  N     H+N N
Sbjct: 1040 EKTHFPKYVRKFFLLLNYYYYYYYYYNNNNNNNNNNNNHNNNANYLQHTNNN 1091


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,017,301
Number of Sequences: 53049
Number of extensions: 391966
Number of successful extensions: 873
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1742533632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)