Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0080
         (494 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024817-27|AAY86296.1|  636|Caenorhabditis elegans Hypothetical...    32   0.20 
U41263-9|AAC24424.1|  179|Caenorhabditis elegans Hypothetical pr...    29   1.9  
AF003386-7|AAB54258.2|  412|Caenorhabditis elegans Hypothetical ...    29   1.9  
Z82270-1|CAB63203.1|  914|Caenorhabditis elegans Hypothetical pr...    28   3.2  
Z75530-3|CAA99793.1|  702|Caenorhabditis elegans Hypothetical pr...    28   4.3  
Z81536-9|CAB04362.1|  733|Caenorhabditis elegans Hypothetical pr...    27   5.7  
U53149-5|AAA96121.2|  427|Caenorhabditis elegans Hypothetical pr...    27   7.5  
Z81061-2|CAB02931.1|  312|Caenorhabditis elegans Hypothetical pr...    27   9.9  
U41263-6|AAC24432.1|  338|Caenorhabditis elegans Serpentine rece...    27   9.9  
AL023828-21|CAA19466.1|  381|Caenorhabditis elegans Hypothetical...    27   9.9  
AL023828-20|CAA19465.1|  378|Caenorhabditis elegans Hypothetical...    27   9.9  

>AC024817-27|AAY86296.1|  636|Caenorhabditis elegans Hypothetical
           protein Y54G2A.40 protein.
          Length = 636

 Score = 32.3 bits (70), Expect = 0.20
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -2

Query: 370 NKYYDSCYRQETQ-SCQHIRCCVCFLSFNNNPI 275
           N++YD+  +++   SCQH  C  CF  + N PI
Sbjct: 18  NQFYDNLEKRQCYCSCQHSLCTQCFNKYKNCPI 50


>U41263-9|AAC24424.1|  179|Caenorhabditis elegans Hypothetical
           protein T19D12.3 protein.
          Length = 179

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
 Frame = +1

Query: 31  YNLYDFLSTNHYYSKRYRYSTFDRTTG---NHTKY 126
           YN+ DF+S N Y S  Y +ST   T      HT Y
Sbjct: 17  YNVIDFVSNNLYNSTNYDFSTVTETINIPYAHTDY 51


>AF003386-7|AAB54258.2|  412|Caenorhabditis elegans Hypothetical
           protein F59E12.8 protein.
          Length = 412

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = +2

Query: 308 TASYVLAGLGFLPVATIIIFVLRNLLHKKTKEIDTEYE 421
           T  ++L  L  L VA I+ F+LR +  K TKE ++ YE
Sbjct: 61  TTVWLLLSLTVLVVA-IVFFILRFVEFKSTKETESSYE 97


>Z82270-1|CAB63203.1|  914|Caenorhabditis elegans Hypothetical
           protein F53H2.1 protein.
          Length = 914

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
 Frame = +1

Query: 22  NHYYNLYDFLSTNHYYSKRY-RYSTFDRTTGNHTKYRINNIQTLHSNFN 165
           N Y N Y   STNHY    Y R S+   + GN    ++       SN N
Sbjct: 412 NIYENFYGNSSTNHYPPTPYPRTSSLTSSIGNPGGPKLEEFHNATSNLN 460


>Z75530-3|CAA99793.1|  702|Caenorhabditis elegans Hypothetical
           protein C47E8.5 protein.
          Length = 702

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +2

Query: 389 KKTKEIDTEYEGYFDDAEVNKESPI 463
           KKTK+I    E YF+D E+NK  PI
Sbjct: 246 KKTKKIK---EKYFEDEELNKTKPI 267


>Z81536-9|CAB04362.1|  733|Caenorhabditis elegans Hypothetical
           protein F40D4.12 protein.
          Length = 733

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = -3

Query: 234 TFDSTSVVFLETDRGFELDSEDFIEVTVKGLNVVDSIFCVVPGSSVECAI 85
           +F++  VV L   +GF +D E   E+    L+  + + C      VEC I
Sbjct: 210 SFENECVVVLYNSQGFNIDEEGLNELFGPPLDKFNDLTCRSLFDGVECDI 259


>U53149-5|AAA96121.2|  427|Caenorhabditis elegans Hypothetical
           protein C24B5.1 protein.
          Length = 427

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -2

Query: 454 FLINLSVIEIPFVLSVYFFGLLMQ*ISKNKYYDSC 350
           FL++L V  I  V  +YF+ +    + +N YY SC
Sbjct: 125 FLLSLLVFWIEEVAYIYFYDIFQDSLLRNSYY-SC 158


>Z81061-2|CAB02931.1|  312|Caenorhabditis elegans Hypothetical
           protein F14H8.2 protein.
          Length = 312

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -3

Query: 240 LTTFDSTSVVFLETDRGFELDSEDFIEVTVKGLNVVDSI 124
           L  FDS   +  E DR  + D++DF E T K   V+  I
Sbjct: 172 LDAFDSLKDLEKEVDRDEKSDAKDFEEATDKAEIVIQQI 210


>U41263-6|AAC24432.1|  338|Caenorhabditis elegans Serpentine
           receptor, class a (alpha)protein 26 protein.
          Length = 338

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -2

Query: 448 INLSVIEIPFVLSVYFFGLLMQ*ISKNKYYDSCYR 344
           IN   I    ++S YFF L+++ + KN  + +C R
Sbjct: 29  INFVCIISIIIISYYFFYLVVKTLIKNNIFSNCTR 63


>AL023828-21|CAA19466.1|  381|Caenorhabditis elegans Hypothetical
           protein Y17G7B.18b protein.
          Length = 381

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 64  YYSKRYRYSTFDRTTG 111
           Y++K+YRY  FDR  G
Sbjct: 115 YFNKKYRYGNFDRYYG 130


>AL023828-20|CAA19465.1|  378|Caenorhabditis elegans Hypothetical
           protein Y17G7B.18a protein.
          Length = 378

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 64  YYSKRYRYSTFDRTTG 111
           Y++K+YRY  FDR  G
Sbjct: 112 YFNKKYRYGNFDRYYG 127


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,476,325
Number of Sequences: 27780
Number of extensions: 210707
Number of successful extensions: 580
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 580
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)