Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0080
         (494 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    25   0.58 
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    22   4.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   4.1  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              21   5.4  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   7.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   9.5  

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 24.6 bits (51), Expect = 0.58
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +2

Query: 311 ASYVLAGLGFLPVATIIIFVLRNLL 385
           A YVL  +G +PV  I + +L+N++
Sbjct: 65  AGYVLIHIGSVPVNNINLILLQNII 89


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 434 HRNTLRTQCLFLWSSYAIN 378
           HRN+ R   +  WSS AIN
Sbjct: 110 HRNSDRDLNIRKWSSIAIN 128


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 95  STELPGTTQNIESTTFKP 148
           +T  P TTQN  +TT  P
Sbjct: 674 TTTTPNTTQNASATTPPP 691


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 168 FIEVTVKGLNVVD 130
           FIE T+K  NVVD
Sbjct: 62  FIECTMKKFNVVD 74


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 206 RNTTLVESKVVNLSNSIENSSSQN 277
           RNT LVE     L N+++   +QN
Sbjct: 354 RNTELVERMHNKLRNALQTVLAQN 377


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/22 (36%), Positives = 9/22 (40%)
 Frame = -2

Query: 337 TQSCQHIRCCVCFLSFNNNPIL 272
           T     +RC   FL    NP L
Sbjct: 693 TMESHEVRCTAVFLLMKTNPPL 714


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,595
Number of Sequences: 438
Number of extensions: 3138
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)