Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0079
         (660 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    25   0.55 
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   3.9  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   5.1  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   6.8  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    21   9.0  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   9.0  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   9.0  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 174 QFASSMLSPPSTMPWYPSRIKYT 106
           Q  S  LSP S++P YP+R + T
Sbjct: 473 QRTSPQLSPMSSLPPYPNRTQIT 495


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 199 VNYRANRRPVRFFNVITSIYHAL 131
           ++YR +R  +RF  V+  + H L
Sbjct: 1   MSYRLSRNDIRFLKVMYKLSHFL 23


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 610 KITTVATHDLHNKRSLM*ISSAYNCINSFN 521
           KI T+A     N   L  +  AYN I+S +
Sbjct: 151 KIATIAYETFQNLPELEDLDLAYNSISSLD 180


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 205 SFVNYRANRRPVRFFNV 155
           SFVN+R +    RFF +
Sbjct: 288 SFVNFRPSFTAARFFEI 304


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/13 (46%), Positives = 13/13 (100%)
 Frame = +2

Query: 371 LDELLENNKITKD 409
           +DE+L+N+++TK+
Sbjct: 29  IDEILKNDRLTKN 41


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 262 ETTFFFNELHAPS*SNYS 209
           E   FF EL AP   NY+
Sbjct: 306 EAETFFRELEAPCPRNYN 323


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 262 ETTFFFNELHAPS*SNYS 209
           E   FF EL AP   NY+
Sbjct: 306 EAETFFRELEAPCPRNYN 323


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,328
Number of Sequences: 336
Number of extensions: 3614
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)