Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0079
(660 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0132 + 25893241-25893435,25894266-25894487,25894567-258948... 75 7e-14
01_06_0646 - 30832201-30832838,30833643-30833838,30833975-308341... 72 4e-13
05_02_0027 + 5731546-5731820,5731917-5733039,5733124-5733354 63 2e-10
01_01_0646 + 4904790-4904996,4905437-4905483,4905623-4905662,490... 63 2e-10
06_01_0371 - 2678332-2678541,2678650-2678804,2678895-2678940,267... 58 8e-09
09_04_0118 - 14816587-14816754,14816866-14816994,14817744-148178... 56 2e-08
09_04_0529 + 18356964-18358307,18359829-18359944,18360036-183601... 46 4e-05
08_02_0799 - 21317728-21317895,21318018-21318146,21318396-213184... 41 0.001
06_01_0486 - 3455030-3455770 32 0.47
04_04_0189 + 23438794-23439053,23439178-23439400,23439947-23440819 32 0.47
10_08_0002 - 13986969-13989338 30 1.9
06_01_0388 - 2773559-2773621,2774141-2774250,2774360-2774423,277... 29 3.3
03_02_0970 + 12805537-12806253 29 4.3
06_01_0378 - 2717010-2717565,2718165-2718229,2718365-2719117 28 5.7
02_05_0982 - 33303500-33304011,33304091-33304208,33304606-333047... 28 5.7
02_05_0975 + 33227431-33227730,33228556-33228636,33228883-332296... 28 5.7
11_04_0053 - 12881524-12881592,12882481-12882546,12882647-128828... 28 7.6
03_05_0393 - 23754652-23754768,23754868-23755437 28 7.6
03_02_0150 + 5941560-5941739,5942027-5942118,5942232-5942298,594... 28 7.6
>05_06_0132 + 25893241-25893435,25894266-25894487,25894567-25894863,
25894944-25895111,25895201-25895368,25895456-25895536,
25895704-25895770,25895874-25895971,25896587-25896659,
25896753-25896823,25896919-25896968,25897698-25897810,
25898182-25898300,25898629-25898721,25899025-25899051,
25899422-25899823,25900467-25900513,25900612-25900651,
25900733-25900795,25900881-25901018,25901873-25902031,
25902111-25902164,25902324-25902392,25902514-25902643,
25902909-25902949,25903133-25903178,25903200-25903357,
25903560-25903605,25903702-25903853,25904022-25904243
Length = 1202
Score = 74.5 bits (175), Expect = 7e-14
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 3/208 (1%)
Frame = +2
Query: 23 VFTSGGDSQGMNAAVRSVV--RMGIYLGCKVYFIREGYQGMVDGGDNIEEANWSSVSSII 196
+ T GG G+N +R +V +Y K+Y I+ GY+G N SV I
Sbjct: 810 IVTCGGLCPGLNTVIRELVCGLAHMYNVSKIYGIQNGYKGFYSS--NYLTLTPKSVDDIH 867
Query: 197 HKGGTIIGSARCMEFIKKEGRLKAAYNLVSRGITNLVVIGGDGSLTGANLFRQEWSSLLD 376
+GGT++G++R KK N+ RGI + +IGGDG+ GA
Sbjct: 868 KRGGTVLGTSRGGHDTKK-----IVDNIQDRGINQVYIIGGDGTQKGA------------ 910
Query: 377 ELLENNKITKDQREKYKFLHIAGMVGSIDNDFCGTDMTIGTDSALHRIIEAID-AIVSTA 553
+I K+ R++ + +AG+ +IDND D + G D+A+ AID A V
Sbjct: 911 -----YEIFKEIRKRGLKVSVAGIPKTIDNDIAIIDKSFGFDTAVEEAQRAIDSAHVEAC 965
Query: 554 YSHQRTFIMEVMGRHCGYFGPCPALASR 637
+ ++++MGR+ G+ LASR
Sbjct: 966 SAENGIGLVKLMGRYSGFIAMYATLASR 993
>01_06_0646 -
30832201-30832838,30833643-30833838,30833975-30834126,
30834258-30834303,30834992-30835216,30835374-30835414,
30835705-30835834,30835951-30836019,30836254-30836307,
30836389-30836547,30836854-30836991,30837079-30837141,
30837225-30837264,30837369-30837415,30838062-30838373
Length = 769
Score = 72.1 bits (169), Expect = 4e-13
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 3/208 (1%)
Frame = +2
Query: 23 VFTSGGDSQGMNAAVRSVV--RMGIYLGCKVYFIREGYQGMVDGGDNIEEANWSSVSSII 196
+ T GG G+N +R +V +Y ++ I+ GY+G N SV+ I
Sbjct: 166 IVTCGGLCPGLNTVIRELVCGLSHMYNVNDIFGIQNGYKGFYSS--NYLPMTPKSVNDIH 223
Query: 197 HKGGTIIGSARCMEFIKKEGRLKAAYNLVSRGITNLVVIGGDGSLTGANLFRQEWSSLLD 376
+GGT++G++R KK N+ RGI + +IGGDG+ GA
Sbjct: 224 KRGGTVLGTSRGGHDTKK-----IVDNIQDRGINQVYIIGGDGTQKGA------------ 266
Query: 377 ELLENNKITKDQREKYKFLHIAGMVGSIDNDFCGTDMTIGTDSALHRIIEAIDAI-VSTA 553
+I K+ R + + +AG+ +IDND D + G DSA+ AIDA V +
Sbjct: 267 -----YEIYKEIRRRGLKVAVAGVPKTIDNDIAVIDKSFGFDSAVEEAQRAIDAAHVEAS 321
Query: 554 YSHQRTFIMEVMGRHCGYFGPCPALASR 637
+ ++++MGR+ G+ LASR
Sbjct: 322 SAENGIGLVKLMGRYSGFIAMYATLASR 349
>05_02_0027 + 5731546-5731820,5731917-5733039,5733124-5733354
Length = 542
Score = 63.3 bits (147), Expect = 2e-10
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 3/209 (1%)
Frame = +2
Query: 20 AVFTSGGDSQGMNAAVRSVV--RMGIYLGCKVYFIREGYQGMVDGGDNIEEANWSSVSSI 193
A+ T GG G+N +R +V +Y V I GY+G N E SV+ I
Sbjct: 137 AIVTCGGLCPGLNTVIRELVCGLHDMYGVTSVVGIEGGYRGFY--ARNTVELTPRSVNGI 194
Query: 194 IHKGGTIIGSARCMEFIKKEGRLKAAYNLVSRGITNLVVIGGDGSLTGANLFRQEWSSLL 373
+GGT++G++R + K ++ RGI + +IGGDG+ GA E
Sbjct: 195 HKRGGTVLGTSR-----GGQDTGKIVDSIQDRGINQVYIIGGDGTQKGAATIHAE----- 244
Query: 374 DELLENNKITKDQREKYKFLHIAGMVGSIDNDFCGTDMTIGTDSALHRIIEAIDAI-VST 550
QR K + G+ +IDND D + G D+A+ AI+A V
Sbjct: 245 -----------VQRRGLK-CAVVGVPKTIDNDIAVIDRSFGFDTAVEEAQRAINAAHVEA 292
Query: 551 AYSHQRTFIMEVMGRHCGYFGPCPALASR 637
+ ++++MGR+ G+ LASR
Sbjct: 293 ESAENGVGVVKLMGRNSGFIAMYATLASR 321
>01_01_0646 +
4904790-4904996,4905437-4905483,4905623-4905662,
4905770-4905970,4906260-4906472,4906561-4906629,
4906711-4906840,4906934-4906974,4907063-4907287,
4907575-4907745,4908713-4908778
Length = 469
Score = 62.9 bits (146), Expect = 2e-10
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 4/210 (1%)
Frame = +2
Query: 20 AVFTSGGDSQGMNAAVRSVVRMGIY--LGC-KVYFIREGYQGMVDGGDNIEEANWSSVSS 190
A+ T GG G+N +R +V G+Y G V I GY+G N SV+
Sbjct: 130 AIVTCGGLCPGLNTVIRELV-CGLYDMYGVTSVVGIEGGYKGFYSR--NTVALTPKSVND 186
Query: 191 IIHKGGTIIGSARCMEFIKKEGRLKAAYNLVSRGITNLVVIGGDGSLTGANLFRQEWSSL 370
I +GGT++G++R K ++ RGI + +IGGDG+ GA++
Sbjct: 187 IHKRGGTVLGTSR-----GGHDTGKIVDSIKDRGINQVYIIGGDGTQKGASV-------- 233
Query: 371 LDELLENNKITKDQREKYKFLHIAGMVGSIDNDFCGTDMTIGTDSALHRIIEAIDAIVST 550
I ++ R + + G+ +IDND D + G D+A+ AI+A
Sbjct: 234 ---------IYEEVRRRGLKCSVVGVPKTIDNDIAVIDKSFGFDTAVEEAQRAINAAHVE 284
Query: 551 AYSHQRTF-IMEVMGRHCGYFGPCPALASR 637
A S + ++++MGR+ G+ LASR
Sbjct: 285 AESAENGIGVVKLMGRNSGFIAMYATLASR 314
>06_01_0371 -
2678332-2678541,2678650-2678804,2678895-2678940,
2679203-2679424,2679546-2679586,2680104-2680233,
2680316-2680384,2680612-2680665,2680801-2680959,
2681455-2681541,2681628-2681690,2681801-2681840,
2681939-2681985,2682471-2682773
Length = 541
Score = 57.6 bits (133), Expect = 8e-09
Identities = 52/177 (29%), Positives = 84/177 (47%), Gaps = 3/177 (1%)
Frame = +2
Query: 116 IRE--GYQGMVDGGDNIEEANWSSVSSIIHKGGTIIGSARCMEFIKKEGRLKAAYNLVSR 289
IRE GY+G N + + SV+ I +GGT++G++R +K ++ R
Sbjct: 177 IREIGGYRGFY--ACNTIDLSPKSVNDIHKRGGTVLGTSR-----GGHDTMKIVDSIQDR 229
Query: 290 GITNLVVIGGDGSLTGANLFRQEWSSLLDELLENNKITKDQREKYKFLHIAGMVGSIDND 469
GI + VIGGDG+ GA + I ++ R + + +AG+ +IDND
Sbjct: 230 GINQVYVIGGDGTQRGAGV-----------------IFEEIRRRGLKVAVAGIPKTIDND 272
Query: 470 FCGTDMTIGTDSALHRIIEAIDAI-VSTAYSHQRTFIMEVMGRHCGYFGPCPALASR 637
D + G D+A+ AI+A V + ++++MGRH G+ LASR
Sbjct: 273 IPVIDRSFGFDTAVEEAQRAINAAHVEAGSAENGIGLVKLMGRHSGFIAHYATLASR 329
>09_04_0118 -
14816587-14816754,14816866-14816994,14817744-14817824,
14817943-14818047,14818137-14818253,14818335-14818475,
14818965-14819039,14819135-14819236,14819318-14819413,
14819838-14819935,14820056-14820141,14820158-14820231,
14820648-14820758,14821054-14821152,14821941-14822008,
14822855-14822885,14823041-14823148
Length = 562
Score = 56.0 bits (129), Expect = 2e-08
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 2/209 (0%)
Frame = +2
Query: 20 AVFTSGGDSQGMNAAVRSVV-RMGIYLGCKVYFIREGYQGMVDGGDNIEEANWSSVSSII 196
A+ T GG G+N +R +V + IY + I+ GY+G + G + V +I
Sbjct: 208 AIVTCGGLCPGLNDVIRQIVFTLEIYGVKNIVGIQFGYRGFFEKGLKEMPLSRKVVENIN 267
Query: 197 HKGGTIIGSARCMEFIKKEGRLKAAYNLVSRGITNLVVIGGDGSLTGANLFRQEWSSLLD 376
GG+ +G +R K + ++ +R I L VIGG+GS GAN +E
Sbjct: 268 LSGGSFLGVSRGGA---KTSEI--VDSIQARRIDMLFVIGGNGSHAGANAIHEEC----- 317
Query: 377 ELLENNKITKDQREKYKFLHIAGMVGSIDNDFCGTDMTIGTDSALHRIIEAID-AIVSTA 553
++ K K + + + +IDND D T G D+A+ AI+ A +
Sbjct: 318 -----------RKRKLK-VSVVAVPKTIDNDILFMDKTFGFDTAVEEAQRAINSAYIEAR 365
Query: 554 YSHQRTFIMEVMGRHCGYFGPCPALASRQ 640
++ ++++MGR G+ +L+S Q
Sbjct: 366 SAYHGIGLVKLMGRSSGFIAMQASLSSGQ 394
>09_04_0529 +
18356964-18358307,18359829-18359944,18360036-18360133,
18360234-18360418
Length = 580
Score = 45.6 bits (103), Expect = 4e-05
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 4/210 (1%)
Frame = +2
Query: 20 AVFTSGGDSQGMNAAVRS-VVRMGIYLGCK--VYFIREGYQGMVDGGDNIEEANWSSVSS 190
A+FT GG G N VR VV + G + V+ +R GY+G D + + ++V
Sbjct: 93 AIFTCGGLCPGTNTVVRELVVGLSELYGVRGGVFGVRNGYRGFYS--DEVVPLDPAAVEH 150
Query: 191 IIHKGGTIIGSARCMEFIKKEGRLKAAYNLVSRGITNLVVIGGDGSLTGANLFRQEWSSL 370
GG +G++R + R+ A + G + +GGDG++ GA +E
Sbjct: 151 WHKAGGAALGTSRGGFDL---ARIVDA--IERHGFNQVYAVGGDGTMRGAARIHRE---- 201
Query: 371 LDELLENNKITKDQREKYKFLHIAGMVGSIDNDFCGTDMTIGTDSALHRIIEAIDA-IVS 547
+R + +AG+ ++DND D + G +A+ +AI A V
Sbjct: 202 ------------VRRRGRLAVAVAGIPKTVDNDVGVVDRSFGFHTAVEAAQQAIAAGHVE 249
Query: 548 TAYSHQRTFIMEVMGRHCGYFGPCPALASR 637
+ ++++MGR G+ L+SR
Sbjct: 250 AESAANGVGLVKLMGRSAGHIALHATLSSR 279
>08_02_0799 -
21317728-21317895,21318018-21318146,21318396-21318457,
21318519-21318534,21318590-21318694,21318993-21319133,
21319338-21319412,21319510-21319611,21319697-21319792,
21320340-21320451,21320642-21320715,21321016-21321097,
21321201-21321508
Length = 489
Score = 40.7 bits (91), Expect = 0.001
Identities = 46/174 (26%), Positives = 76/174 (43%), Gaps = 1/174 (0%)
Frame = +2
Query: 20 AVFTSGGDSQGMNAAVRSVVRMGIYLGCK-VYFIREGYQGMVDGGDNIEEANWSSVSSII 196
A+ T GG G+N +R +V G K + I GY+G + G + V +I
Sbjct: 175 AIVTCGGLCPGLNDVIRQIVFTLETYGVKNIVGIPFGYRGFFEKGLKEMPLSRHLVENIN 234
Query: 197 HKGGTIIGSARCMEFIKKEGRLKAAYNLVSRGITNLVVIGGDGSLTGANLFRQEWSSLLD 376
GG+ +G +R K + ++ +R I L V+GG+G+ GAN +E
Sbjct: 235 LAGGSFLGVSRGGA---KTSEI--VDSIQARRIDMLFVLGGNGTHAGANAIHEEC----- 284
Query: 377 ELLENNKITKDQREKYKFLHIAGMVGSIDNDFCGTDMTIGTDSALHRIIEAIDA 538
++ K K + + + +IDND D T G D+A+ AI++
Sbjct: 285 -----------RKRKLK-VSVVAVPKTIDNDILLMDKTFGFDTAVEEAQRAINS 326
>06_01_0486 - 3455030-3455770
Length = 246
Score = 31.9 bits (69), Expect = 0.47
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -1
Query: 150 PPSTMPWYPSRIKYTLHPKYMPIRTTDRTAAFIP*ESPPLVNTASP 13
PP T P+ PS Y P Y+P T +IP +PP V +P
Sbjct: 86 PPPTPPYVPSPPPYV--PPYIPPPTPPYVPPYIPPPTPPYVPPPTP 129
>04_04_0189 + 23438794-23439053,23439178-23439400,23439947-23440819
Length = 451
Score = 31.9 bits (69), Expect = 0.47
Identities = 44/188 (23%), Positives = 78/188 (41%), Gaps = 11/188 (5%)
Frame = +2
Query: 107 VYFIREGYQGMVDGGDNIEEANWSSVSSIIHKGGTIIGSARCMEFIKK--EGRLKAAYN- 277
V+ + GY+G + + ++V KGGT++ + R + K +G + Y
Sbjct: 102 VFGVAAGYRGFYGPDADHARLDLAAVDDWHKKGGTVLKTTRGGFDLNKIVDGIVARGYTQ 161
Query: 278 -LVSRG------ITNLVVIGGDGSLTGANLFRQEWSSLLDELLENNKITKDQREKYKFLH 436
L S + + IGGDG++ GA E+ + + +
Sbjct: 162 CLTSNTFYHDYILLKVYAIGGDGTMRGAVAIFNEF-----------------KRRGLNIS 204
Query: 437 IAGMVGSIDNDFCGTDMTIGTDSALHRIIEAIDAIVSTAYSHQRTF-IMEVMGRHCGYFG 613
I G+ ++DND D + G +A+ +AIDA A S ++++MGR G+
Sbjct: 205 ITGIPKTVDNDIGIIDRSFGFQTAVEIAQQAIDAAHVEAVSAVNGIGLVKLMGRSTGHIA 264
Query: 614 PCPALASR 637
L+SR
Sbjct: 265 LHATLSSR 272
>10_08_0002 - 13986969-13989338
Length = 789
Score = 29.9 bits (64), Expect = 1.9
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +2
Query: 323 GSLTGANLFRQEWSSLL----DELLENNKITKDQREKYKFLHIAGMVGSIDNDFCGTDMT 490
G L+G NL QE +S L DELLE + K+ E L I V S+ C D+
Sbjct: 93 GMLSGENLRLQEVASSLLLKLDELLELYSVNKNVEEALGMLKICLQVTSL-CQMCNKDI- 150
Query: 491 IGTDSALHRIIEAIDAI 541
++ LH +++++ I
Sbjct: 151 --AEARLHSALKSLELI 165
>06_01_0388 -
2773559-2773621,2774141-2774250,2774360-2774423,
2775102-2775282,2775355-2775455,2777340-2777426,
2778028-2778140,2778430-2778679
Length = 322
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 289 WYNESCGYWW*WFADW 336
WY CG+WW W ADW
Sbjct: 40 WYR-MCGWWWVW-ADW 53
>03_02_0970 + 12805537-12806253
Length = 238
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +2
Query: 122 EGYQGMVDGGDNIEEANWSSVSSIIHKGGTIIGSARCMEFIKKEGRLKAAYNLVSR 289
+GY+ GG E+ W +S +GG G RC EF +GR Y + R
Sbjct: 126 DGYRPCRGGGAGGEQRPWFKAASEAWRGG---GGPRC-EFRSDDGRAVQRYRMEGR 177
>06_01_0378 - 2717010-2717565,2718165-2718229,2718365-2719117
Length = 457
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 320 DGSLTGANLFRQEWSSLLDELLENNKITKDQREKYKFLHIAGMVGSIDNDF 472
DG A LF Q+W+ + +++ I K +YK ++I G S+ +
Sbjct: 240 DGKDWNARLFSQDWNHAIHNGFKDSSIPKQCLHRYK-IYIEGEAWSVSEKY 289
>02_05_0982 -
33303500-33304011,33304091-33304208,33304606-33304726,
33304811-33304877,33304968-33305102,33305186-33305297,
33305852-33306009,33306177-33306300,33306406-33306542,
33307284-33307403,33307878-33308025,33308674-33308931,
33309090-33309127,33309232-33309674,33309761-33309845,
33310063-33310123,33310277-33310453,33311611-33312408,
33314394-33314693
Length = 1303
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 119 REGYQGMVDGGDNIEEANWSSVSSIIHK 202
+ GY+ V G+ EEA W++V IHK
Sbjct: 21 KRGYREAVAEGNREEEARWANVIGDIHK 48
>02_05_0975 +
33227431-33227730,33228556-33228636,33228883-33229680,
33230829-33231005,33231159-33231274,33231422-33231520,
33231598-33232040,33232147-33232184,33232343-33232600,
33233378-33233525,33233989-33234108,33234884-33234984,
33235090-33235213,33235386-33235498,33236103-33236214,
33236298-33236432,33236527-33236593,33236685-33236741,
33236774-33236900,33237221-33237338,33237418-33237929
Length = 1347
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 119 REGYQGMVDGGDNIEEANWSSVSSIIHK 202
+ GY+ V G+ EEA W++V IHK
Sbjct: 21 KRGYREAVAEGNREEEARWANVIGDIHK 48
>11_04_0053 -
12881524-12881592,12882481-12882546,12882647-12882808,
12883123-12883266,12883975-12884145,12884265-12884333,
12884899-12885054,12887398-12887673
Length = 370
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 116 IREGYQGMVDGGDNIEEANWSSVSSIIHKGG 208
I++ QG +G DNIE AN S + H G
Sbjct: 292 IKDVMQGKAEGADNIENANAGPDSKLNHLTG 322
>03_05_0393 - 23754652-23754768,23754868-23755437
Length = 228
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 113 FIREGYQGMVDGGDNIEEANWSSVS 187
++R Y +VD D + E NWSS++
Sbjct: 140 YVRSEYLNLVDDIDKMRELNWSSLT 164
>03_02_0150 +
5941560-5941739,5942027-5942118,5942232-5942298,
5942401-5942523,5942692-5942784,5943149-5943278,
5943483-5943564,5943682-5943814,5944246-5944451,
5944538-5944663,5945024-5945333,5945518-5945643,
5946151-5946456
Length = 657
Score = 27.9 bits (59), Expect = 7.6
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Frame = +2
Query: 209 TIIGSARCMEFIKKEGRLKAA--YNLVSRGITNLVVIGGDGSLTGANLFRQEWSSLLDEL 382
TI + +++++ KAA Y+ T++VV GG SL R WS + D
Sbjct: 544 TINDKLKVLKWLENVCVAKAASHYSGAFTATTHVVVGGGGASLADYAGVRARWSHVQDRD 603
Query: 383 LENNKITKDQREKYKFLHIAGMVGSIDNDF 472
K+T F ++ GS+ + F
Sbjct: 604 YGFAKLTAFNHTALLFEYVRSRDGSVHDSF 633
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,493,403
Number of Sequences: 37544
Number of extensions: 373879
Number of successful extensions: 999
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 994
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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