Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0079
(660 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF098505-2|AAC67416.2| 814|Caenorhabditis elegans Hypothetical ... 304 4e-83
Z70750-2|CAA94737.1| 756|Caenorhabditis elegans Hypothetical pr... 231 2e-61
AF098505-3|AAL27269.2| 578|Caenorhabditis elegans Hypothetical ... 95 5e-20
U55365-8|AAA98573.2| 383|Caenorhabditis elegans Hypothetical pr... 28 5.1
AF016441-7|AAB65908.1| 344|Caenorhabditis elegans Hypothetical ... 28 6.8
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 27 8.9
U49941-1|AAB53872.1| 609|Caenorhabditis elegans Hypothetical pr... 27 8.9
L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclas... 27 8.9
AF106591-5|AAK71394.1| 637|Caenorhabditis elegans Hypothetical ... 27 8.9
AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical ... 27 8.9
AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical ... 27 8.9
>AF098505-2|AAC67416.2| 814|Caenorhabditis elegans Hypothetical
protein Y71H10A.1a protein.
Length = 814
Score = 304 bits (746), Expect = 4e-83
Identities = 140/210 (66%), Positives = 170/210 (80%)
Frame = +2
Query: 5 KGKGLAVFTSGGDSQGMNAAVRSVVRMGIYLGCKVYFIREGYQGMVDGGDNIEEANWSSV 184
KG+ LA++TSGGDSQGMN+AVRS+ RM IY GCKVY I EGY+GM++GGD I+EA W++V
Sbjct: 44 KGRTLAIYTSGGDSQGMNSAVRSITRMAIYCGCKVYLIYEGYEGMIEGGDFIKEATWNTV 103
Query: 185 SSIIHKGGTIIGSARCMEFIKKEGRLKAAYNLVSRGITNLVVIGGDGSLTGANLFRQEWS 364
S II +GGTIIGSAR EF +EGRLKAA NL++RGI LV IGGDGSLTGAN FR EW+
Sbjct: 104 SDIIQQGGTIIGSARSSEFRTREGRLKAATNLINRGIGRLVCIGGDGSLTGANTFRLEWT 163
Query: 365 SLLDELLENNKITKDQREKYKFLHIAGMVGSIDNDFCGTDMTIGTDSALHRIIEAIDAIV 544
L+ EL++N ++T +K ++ I G+VGSIDNDFCGTDMTIGTDSAL RII +IDA+V
Sbjct: 164 DLVQELVKNQRVTAAAAKKIPYIQIVGLVGSIDNDFCGTDMTIGTDSALQRIISSIDAVV 223
Query: 545 STAYSHQRTFIMEVMGRHCGYFGPCPALAS 634
+TA SHQR F++EVMGRHCGY ALAS
Sbjct: 224 ATAQSHQRAFVIEVMGRHCGYLALVAALAS 253
Score = 94.7 bits (225), Expect = 5e-20
Identities = 70/209 (33%), Positives = 111/209 (53%), Gaps = 3/209 (1%)
Frame = +2
Query: 17 LAVFTSGGDSQGMNAAVRSVVRMGIYLGCKVYFIREGYQGMVDGGDNIEEANWSSVSSII 196
+AV G + GMNAAVRS VRM +Y C VY I + ++G+ +G + ++ WS V++
Sbjct: 437 VAVINVGAPAGGMNAAVRSYVRMALYHQCTVYGIEDSFEGLANG--SFKQFKWSDVTNWA 494
Query: 197 HKGGTIIGSARCMEFIKKEGRLKAAYNLVSRGITNLVVIGGDGSLTGANLFRQEWSSLLD 376
GG+ +G+ + + K +L A L I L+++GG F S+++
Sbjct: 495 MNGGSFLGTQKSLPTEKTMPQLAA--QLKKHNIQALLLVGG---------FEAYHSTII- 542
Query: 377 ELLENNKITKDQREKYKFLHIAGMV--GSIDNDFCGTDMTIGTDSALHRIIEAIDAIVST 550
L EN REKY I V +I N+ GT +++G+D+A++ I + ID I +
Sbjct: 543 -LAEN-------REKYPEFCIPMCVIPCTISNNVPGTMVSLGSDTAINEICQMIDKIKQS 594
Query: 551 AY-SHQRTFIMEVMGRHCGYFGPCPALAS 634
A + +R FI+E MG +CGY AL+S
Sbjct: 595 ATGTKRRVFIVETMGGYCGYLATLSALSS 623
>Z70750-2|CAA94737.1| 756|Caenorhabditis elegans Hypothetical
protein C50F4.2 protein.
Length = 756
Score = 231 bits (566), Expect = 2e-61
Identities = 113/209 (54%), Positives = 148/209 (70%)
Frame = +2
Query: 5 KGKGLAVFTSGGDSQGMNAAVRSVVRMGIYLGCKVYFIREGYQGMVDGGDNIEEANWSSV 184
K G+ V TSGGDSQGMNAAVRSVVR I G + Y IREGY G+++G NIE A W+ V
Sbjct: 9 KDHGVGVLTSGGDSQGMNAAVRSVVRETIRQGHRCYLIREGYNGLING--NIELAKWAHV 66
Query: 185 SSIIHKGGTIIGSARCMEFIKKEGRLKAAYNLVSRGITNLVVIGGDGSLTGANLFRQEWS 364
+++ H GG++IG++RC EF +GR KAA + + I +L+VIGGDGSL GA ++EW
Sbjct: 67 ANVTHLGGSMIGTSRCDEFRTTDGRKKAAAIMFDKRIFHLIVIGGDGSLMGAQKLKEEWG 126
Query: 365 SLLDELLENNKITKDQREKYKFLHIAGMVGSIDNDFCGTDMTIGTDSALHRIIEAIDAIV 544
+EL KIT++ + + LH+AG+VGSIDND +D +IG+D+ALHRI EAID +V
Sbjct: 127 RFGEELFAEGKITEEVANEGRELHLAGIVGSIDNDCIESDKSIGSDTALHRICEAIDGLV 186
Query: 545 STAYSHQRTFIMEVMGRHCGYFGPCPALA 631
TA SHQR F++EVMGRHCGY A+A
Sbjct: 187 MTAQSHQRVFVVEVMGRHCGYLALTAAIA 215
>AF098505-3|AAL27269.2| 578|Caenorhabditis elegans Hypothetical
protein Y71H10A.1b protein.
Length = 578
Score = 94.7 bits (225), Expect = 5e-20
Identities = 70/209 (33%), Positives = 111/209 (53%), Gaps = 3/209 (1%)
Frame = +2
Query: 17 LAVFTSGGDSQGMNAAVRSVVRMGIYLGCKVYFIREGYQGMVDGGDNIEEANWSSVSSII 196
+AV G + GMNAAVRS VRM +Y C VY I + ++G+ +G + ++ WS V++
Sbjct: 234 VAVINVGAPAGGMNAAVRSYVRMALYHQCTVYGIEDSFEGLANG--SFKQFKWSDVTNWA 291
Query: 197 HKGGTIIGSARCMEFIKKEGRLKAAYNLVSRGITNLVVIGGDGSLTGANLFRQEWSSLLD 376
GG+ +G+ + + K +L A L I L+++GG F S+++
Sbjct: 292 MNGGSFLGTQKSLPTEKTMPQLAA--QLKKHNIQALLLVGG---------FEAYHSTII- 339
Query: 377 ELLENNKITKDQREKYKFLHIAGMV--GSIDNDFCGTDMTIGTDSALHRIIEAIDAIVST 550
L EN REKY I V +I N+ GT +++G+D+A++ I + ID I +
Sbjct: 340 -LAEN-------REKYPEFCIPMCVIPCTISNNVPGTMVSLGSDTAINEICQMIDKIKQS 391
Query: 551 AY-SHQRTFIMEVMGRHCGYFGPCPALAS 634
A + +R FI+E MG +CGY AL+S
Sbjct: 392 ATGTKRRVFIVETMGGYCGYLATLSALSS 420
Score = 78.6 bits (185), Expect = 4e-15
Identities = 36/50 (72%), Positives = 41/50 (82%)
Frame = +2
Query: 485 MTIGTDSALHRIIEAIDAIVSTAYSHQRTFIMEVMGRHCGYFGPCPALAS 634
MTIGTDSAL RII +IDA+V+TA SHQR F++EVMGRHCGY ALAS
Sbjct: 1 MTIGTDSALQRIISSIDAVVATAQSHQRAFVIEVMGRHCGYLALVAALAS 50
>U55365-8|AAA98573.2| 383|Caenorhabditis elegans Hypothetical
protein C12D5.2 protein.
Length = 383
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 220 SNYSASFVNYRANRRPVRFFNVITSI 143
SN +F Y +R+ RFFN++TSI
Sbjct: 179 SNLDYNFKTYSPHRKQWRFFNLLTSI 204
>AF016441-7|AAB65908.1| 344|Caenorhabditis elegans Hypothetical
protein M03F8.1 protein.
Length = 344
Score = 27.9 bits (59), Expect = 6.8
Identities = 9/31 (29%), Positives = 20/31 (64%)
Frame = -3
Query: 427 FIFFPLIFSNFVVLQQFIKKARPFLSEQIGT 335
F+F P++ ++F++ + + + + F S IGT
Sbjct: 161 FVFLPMVLNSFILAKTLVIENKTFTSLMIGT 191
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = -1
Query: 150 PPSTMPWYPSRIKYTLHPKYMPIRTTDRTAAFIP*ESPPLVNTASPL 10
PP T P P T P +P ++ F P PP VN PL
Sbjct: 412 PPKTTP--PKTEPPTTEPPNIPYCWQQQSRLFAPSPPPPRVNNTMPL 456
>U49941-1|AAB53872.1| 609|Caenorhabditis elegans Hypothetical
protein K10B3.5 protein.
Length = 609
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 173 WSSVSSIIHKGGTIIGSARCMEFIKKEGRL 262
WS VSS + + G + G+ + E IKKE ++
Sbjct: 409 WSFVSSHLAQSGKLTGTTKDNETIKKEAKV 438
>L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclase
protein.
Length = 1276
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 371 LDELLENNKITKDQREKYKFLH 436
L+++LEN KI D+ KY LH
Sbjct: 814 LEDILENEKIELDKLMKYSLLH 835
>AF106591-5|AAK71394.1| 637|Caenorhabditis elegans Hypothetical
protein T01A4.1b protein.
Length = 637
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 371 LDELLENNKITKDQREKYKFLH 436
L+++LEN KI D+ KY LH
Sbjct: 187 LEDILENEKIELDKLMKYSLLH 208
>AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical
protein T01A4.1a protein.
Length = 1217
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 371 LDELLENNKITKDQREKYKFLH 436
L+++LEN KI D+ KY LH
Sbjct: 755 LEDILENEKIELDKLMKYSLLH 776
>AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical
protein T01A4.1c protein.
Length = 1276
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 371 LDELLENNKITKDQREKYKFLH 436
L+++LEN KI D+ KY LH
Sbjct: 814 LEDILENEKIELDKLMKYSLLH 835
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,479,535
Number of Sequences: 27780
Number of extensions: 316328
Number of successful extensions: 904
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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