Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0078
(759 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 293 7e-80
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 293 7e-80
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 293 7e-80
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 293 7e-80
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 293 7e-80
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 293 7e-80
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 293 1e-79
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 293 1e-79
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 293 1e-79
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 287 8e-78
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 281 3e-76
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 151 7e-37
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 130 1e-30
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 120 8e-28
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 99 3e-21
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 92 4e-19
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 75 4e-14
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 75 4e-14
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 1e-05
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.67
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.67
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.67
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 8.3
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 8.3
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 8.3
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 8.3
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 293 bits (720), Expect = 7e-80
Identities = 135/140 (96%), Positives = 139/140 (99%)
Frame = -3
Query: 691 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 512
LEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYA
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYA 296
Query: 511 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 332
NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 297 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 356
Query: 331 WISKQEYDESGPSIVHRKCF 272
WISKQEYDESGPSIVHRKCF
Sbjct: 357 WISKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 293 bits (720), Expect = 7e-80
Identities = 135/140 (96%), Positives = 139/140 (99%)
Frame = -3
Query: 691 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 512
LEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYA
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYA 296
Query: 511 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 332
NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 297 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 356
Query: 331 WISKQEYDESGPSIVHRKCF 272
WISKQEYDESGPSIVHRKCF
Sbjct: 357 WISKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 293 bits (720), Expect = 7e-80
Identities = 135/140 (96%), Positives = 139/140 (99%)
Frame = -3
Query: 691 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 512
LEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYA
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYA 296
Query: 511 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 332
NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 297 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 356
Query: 331 WISKQEYDESGPSIVHRKCF 272
WISKQEYDESGPSIVHRKCF
Sbjct: 357 WISKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 293 bits (720), Expect = 7e-80
Identities = 135/140 (96%), Positives = 139/140 (99%)
Frame = -3
Query: 691 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 512
LEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYA
Sbjct: 193 LEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYA 252
Query: 511 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 332
NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 253 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 312
Query: 331 WISKQEYDESGPSIVHRKCF 272
WISKQEYDESGPSIVHRKCF
Sbjct: 313 WISKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 293 bits (720), Expect = 7e-80
Identities = 135/140 (96%), Positives = 139/140 (99%)
Frame = -3
Query: 691 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 512
LEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYA
Sbjct: 223 LEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYA 282
Query: 511 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 332
NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 283 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 342
Query: 331 WISKQEYDESGPSIVHRKCF 272
WISKQEYDESGPSIVHRKCF
Sbjct: 343 WISKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 293 bits (720), Expect = 7e-80
Identities = 135/140 (96%), Positives = 139/140 (99%)
Frame = -3
Query: 691 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 512
LEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYA
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYA 296
Query: 511 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 332
NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 297 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 356
Query: 331 WISKQEYDESGPSIVHRKCF 272
WISKQEYDESGPSIVHRKCF
Sbjct: 357 WISKQEYDESGPSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 293 bits (718), Expect = 1e-79
Identities = 134/140 (95%), Positives = 139/140 (99%)
Frame = -3
Query: 691 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 512
LEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYA
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYA 296
Query: 511 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 332
NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 297 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 356
Query: 331 WISKQEYDESGPSIVHRKCF 272
WISKQEYDESGPSIVHRKCF
Sbjct: 357 WISKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 293 bits (718), Expect = 1e-79
Identities = 134/140 (95%), Positives = 139/140 (99%)
Frame = -3
Query: 691 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 512
LEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYA
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYA 296
Query: 511 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 332
NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 297 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 356
Query: 331 WISKQEYDESGPSIVHRKCF 272
WISKQEYDESGPSIVHRKCF
Sbjct: 357 WISKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 293 bits (718), Expect = 1e-79
Identities = 134/140 (95%), Positives = 139/140 (99%)
Frame = -3
Query: 691 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 512
LEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYA
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYA 296
Query: 511 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 332
NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 297 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 356
Query: 331 WISKQEYDESGPSIVHRKCF 272
WISKQEYDESGPSIVHRKCF
Sbjct: 357 WISKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 287 bits (703), Expect = 8e-78
Identities = 133/140 (95%), Positives = 138/140 (98%)
Frame = -3
Query: 691 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 512
LEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYA
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYA 296
Query: 511 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 332
NTVLSGGTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 297 NTVLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQM 355
Query: 331 WISKQEYDESGPSIVHRKCF 272
WISKQEYDESGPSIVHRKCF
Sbjct: 356 WISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 281 bits (690), Expect = 3e-76
Identities = 130/140 (92%), Positives = 134/140 (95%)
Frame = -3
Query: 691 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 512
LEKSYELPDGQVITIGNERFRCPE LFQP+F+GME GIHETTY SIMKCDVDIRKDLYA
Sbjct: 236 LEKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYA 295
Query: 511 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 332
NTVLSGGT+M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 296 NTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 355
Query: 331 WISKQEYDESGPSIVHRKCF 272
WISKQEYDESGPSIVHRKCF
Sbjct: 356 WISKQEYDESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 151 bits (365), Expect = 7e-37
Identities = 69/140 (49%), Positives = 94/140 (67%)
Frame = -3
Query: 691 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 512
++ SY LPD I I N FR PE LF+P +G E G+ SIMKCDVD+R+ LY+
Sbjct: 235 VKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYS 294
Query: 511 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 332
N VLSGGTT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++M
Sbjct: 295 NIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKM 354
Query: 331 WISKQEYDESGPSIVHRKCF 272
W+ K+EY++ G S +H++ F
Sbjct: 355 WLGKKEYEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 130 bits (313), Expect = 1e-30
Identities = 65/144 (45%), Positives = 88/144 (61%), Gaps = 13/144 (9%)
Frame = -3
Query: 691 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 512
L + Y LPDG+VI +G ERF PE LFQP + +E G+ E + I D+D R D Y
Sbjct: 240 LSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYK 299
Query: 511 NTVLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGS 365
+ VLSGGTTMYPG+ R++KE+ L A KI+I APP RK+ V++GG+
Sbjct: 300 HIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGA 359
Query: 364 ILASL--STFQQMWISKQEYDESG 299
+LA+L Q W+SK+EY+E G
Sbjct: 360 VLANLMKDRDQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 120 bits (290), Expect = 8e-28
Identities = 60/143 (41%), Positives = 81/143 (56%), Gaps = 8/143 (5%)
Frame = -3
Query: 679 YELPDGQVITIGNERFRCPEALFQPSFLGMEA-----CGIHETTYNSIMKCDVDIRKDLY 515
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 514 ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLST 344
+N ++GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL T
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGT 412
Query: 343 FQQMWISKQEYDESGPSIVHRKC 275
FQQMW+SK EYDESG SIV +KC
Sbjct: 413 FQQMWVSKAEYDESGKSIVEKKC 435
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 99.1 bits (236), Expect = 3e-21
Identities = 41/112 (36%), Positives = 73/112 (65%)
Frame = -3
Query: 649 IGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGI 470
I N RF C E LF+P G++ G+H+ + +I++C +D R+ LY N L+GG ++ PGI
Sbjct: 428 IDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGI 487
Query: 469 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 314
A+++++E++ + P+T+ ++ P R + ++G I+AS STF+ IS Q+
Sbjct: 488 AEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 91.9 bits (218), Expect = 4e-19
Identities = 51/139 (36%), Positives = 77/139 (55%), Gaps = 17/139 (12%)
Frame = -3
Query: 655 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 479
+ +G ERF PE F P F E I +T I +C +D+R+ LY N VLSGG+TM+
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMF 335
Query: 478 PGIADRMQKEITALA----------------PSTMKIKIIAPPERKYSVWIGGSILASLS 347
A ++Q+++ L+ P + +++I+ ++Y+VW GGS+LAS S
Sbjct: 336 KDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTS 395
Query: 346 TFQQMWISKQEYDESGPSI 290
F Q+ +K EY E GPSI
Sbjct: 396 EFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 75.4 bits (177), Expect = 4e-14
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Frame = -3
Query: 655 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 476
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 475 GIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 305
G +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 304 SGPSIVHRKCF*T 266
G S+ F T
Sbjct: 379 RGDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 75.4 bits (177), Expect = 4e-14
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Frame = -3
Query: 655 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 476
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 475 GIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 305
G +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 304 SGPSIVHRKCF*T 266
G S+ F T
Sbjct: 379 RGDSLEFSNFFQT 391
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = -3
Query: 553 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 389
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 388 ----YSVWIGGSILASL-STFQQMWISKQEY 311
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.67
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 377 PYGVLPLWRSNDLNLHCRWGESCD 448
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.67
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 377 PYGVLPLWRSNDLNLHCRWGESCD 448
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.67
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 377 PYGVLPLWRSNDLNLHCRWGESCD 448
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 213 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 305
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 316 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 215
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 213 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 305
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -3
Query: 397 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 236
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,651,205
Number of Sequences: 27780
Number of extensions: 385400
Number of successful extensions: 1188
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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