Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0076
         (645 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    23   2.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   3.8  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   5.0  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   5.0  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   5.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   6.6  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   6.6  

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = +3

Query: 54  QTTDQSALYHRMDAAGPGST-AQPTRASNKS*STARWTC 167
           Q    +ALYH++   GP  T  QP   + K     ++ C
Sbjct: 44  QYLQNAALYHKLQFRGPPRTPLQPKLVAGKLKPKRQFIC 82


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/46 (23%), Positives = 22/46 (47%)
 Frame = -3

Query: 205 LWPVSSNSLHSLKHVHLAVLYDLFDARVGCAVDPGPAASIR*YNAD 68
           +W  + + L S + + +  +YD F      A++ G   + R Y +D
Sbjct: 235 IWSPNCDKLSSTEQLFIRPMYDAFLIDQSLALNRGRDENPRTYRSD 280


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +3

Query: 30  WWNAGDSGQTTDQSALYHRM 89
           WW+   +G   D S   H+M
Sbjct: 189 WWDVHSTGSWLDMSGGMHQM 208


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 553 KANRATQRRAVPTGTTR 503
           + N  T+ +AVPTGT +
Sbjct: 202 RQNSQTRNQAVPTGTIK 218


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 553 KANRATQRRAVPTGTTR 503
           + N  T+ +AVPTGT +
Sbjct: 202 RQNSQTRNQAVPTGTIK 218


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 340 ELDEPEFVFEFALSLFFVHIF 278
           EL    F F F   LFF++++
Sbjct: 5   ELKRVLFFFSFCCILFFIYLY 25


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 456 PRPLVLSCRTPLPSKPLVV 512
           PRP  +S R P P +P  V
Sbjct: 255 PRPTKVSRRKPRPPRPTQV 273


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,806
Number of Sequences: 336
Number of extensions: 1868
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)