Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0076
         (645 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             50   5e-08
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   4.7  

>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 50.4 bits (115), Expect = 5e-08
 Identities = 21/60 (35%), Positives = 35/60 (58%)
 Frame = +2

Query: 62   GPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVKTVRRHRPQLVENMTEYKYCY 241
            GP+ V    G  R GV+   +  +E++   G +DVFQ V+ +R  RP +V+   +Y++CY
Sbjct: 1157 GPITVHCSAGVGRTGVFITLSIVLERMQYEGVLDVFQTVRILRSQRPAMVQTEDQYQFCY 1216



 Score = 32.3 bits (70), Expect = 0.014
 Identities = 14/64 (21%), Positives = 32/64 (50%)
 Frame = +2

Query: 53   TDYGPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVKTVRRHRPQLVENMTEYK 232
            ++ GP+ V    G    G +   ++ +E++     +D++  V  +R HR  +V+   +Y 
Sbjct: 863  SESGPIIVHCSAGVGVTGCFIVIDSMLERMKYEKTIDIYGHVTCLRAHRNYMVQTEDQYI 922

Query: 233  YCYD 244
            + +D
Sbjct: 923  FIHD 926


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = +3

Query: 435 SLWTACCPRPLVLSCRTPLPSKPLVVPVGTALRCVALFALKTTTPRR 575
           SL     P P  +  R+P P+K  ++ V  A + ++     +T P R
Sbjct: 366 SLPVRSSPEPSPVLLRSPTPAKKPLISVAPASKLLSKSLQPSTLPTR 412


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 487,222
Number of Sequences: 2352
Number of extensions: 7914
Number of successful extensions: 22
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)