Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0076
(645 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66524-9|CAA91422.3| 696|Caenorhabditis elegans Hypothetical pr... 79 4e-15
Z66524-8|CAH10782.1| 753|Caenorhabditis elegans Hypothetical pr... 79 4e-15
Z66523-11|CAA91417.3| 696|Caenorhabditis elegans Hypothetical p... 79 4e-15
Z66523-10|CAH04723.1| 753|Caenorhabditis elegans Hypothetical p... 79 4e-15
U39997-5|AAN60515.1| 1409|Caenorhabditis elegans Clear protein 1... 47 1e-05
U39997-4|AAN60516.1| 1444|Caenorhabditis elegans Clear protein 1... 47 1e-05
AF047880-1|AAC27551.1| 1409|Caenorhabditis elegans CLR-1 protein. 47 1e-05
AL031269-1|CAA20333.1| 122|Caenorhabditis elegans Hypothetical ... 41 7e-04
AC025726-11|AAY43987.1| 294|Caenorhabditis elegans Hypothetical... 41 9e-04
AL110499-3|CAE18038.1| 437|Caenorhabditis elegans Hypothetical ... 40 0.002
AF045642-11|AAC02584.1| 443|Caenorhabditis elegans Hypothetical... 39 0.003
Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z49938-1|CAD59171.1| 1216|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical pr... 38 0.005
AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein. 38 0.005
AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein. 38 0.005
AF036688-8|AAB88314.2| 482|Caenorhabditis elegans Hypothetical ... 37 0.011
Z69664-6|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical pr... 36 0.019
U28971-8|AAD31046.2| 767|Caenorhabditis elegans Related to isle... 36 0.025
AJ245560-1|CAB52188.1| 767|Caenorhabditis elegans IDA-1 protein... 36 0.025
AF126740-1|AAK14908.1| 767|Caenorhabditis elegans IA2 protein. 36 0.025
Z81091-4|CAD56588.1| 287|Caenorhabditis elegans Hypothetical pr... 36 0.032
AC024751-4|AAK21505.1| 425|Caenorhabditis elegans Hypothetical ... 36 0.032
Z75550-6|CAA99930.1| 591|Caenorhabditis elegans Hypothetical pr... 35 0.057
Z77661-8|CAB01189.1| 438|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z72504-2|CAA96607.1| 430|Caenorhabditis elegans Hypothetical pr... 32 0.30
Z68303-2|CAA92641.2| 428|Caenorhabditis elegans Hypothetical pr... 32 0.30
AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily a... 31 0.92
U10438-14|ABB88242.1| 441|Caenorhabditis elegans Hypothetical p... 30 1.2
Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical pr... 29 2.1
U97017-8|AAB52356.1| 363|Caenorhabditis elegans Hypothetical pr... 29 2.8
U97017-5|AAB52361.2| 312|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z81550-6|CAB04481.3| 578|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z70211-5|CAA94160.3| 578|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z68118-8|CAA92189.2| 289|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF273825-1|AAG15174.1| 579|Caenorhabditis elegans nuclear recep... 29 3.7
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z77664-2|CAB01217.1| 643|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z73970-5|CAA98248.1| 643|Caenorhabditis elegans Hypothetical pr... 28 6.5
AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical ... 28 6.5
Z22173-1|CAA80125.1| 398|Caenorhabditis elegans Hypothetical pr... 27 8.6
>Z66524-9|CAA91422.3| 696|Caenorhabditis elegans Hypothetical
protein T13H5.1a protein.
Length = 696
Score = 78.6 bits (185), Expect = 4e-15
Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Frame = +2
Query: 2 TNSLVELMNMVERWRQRT----DYGPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVF 169
T L++++ M WR+R + P V+S +G SR GVY AN CI+Q+ EVDVF
Sbjct: 541 TTGLIDVIKMARSWRKRAPDRPETKPTIVMSHNGVSRVGVYIGANICIDQMDIDHEVDVF 600
Query: 170 QAVKTVRRHRPQLVENMTEYKYCYD 244
AVK +R +RPQL++ EYKY YD
Sbjct: 601 HAVKMMRINRPQLIDMKDEYKYLYD 625
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/81 (27%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +2
Query: 5 NSLVELMNMVERWRQRTDY-GPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVK 181
++ +EL V ++ ++ P+ V +G R+G + A +A +E + K G++D F+ K
Sbjct: 232 SAFIELRRRVRQFMEKNPVEAPMVVHCSNGAGRSGAFLALDANLELMKKTGQLDFFEYAK 291
Query: 182 TVRRHRPQLVENMTEYKYCYD 244
T+ RP L++++ +Y + Y+
Sbjct: 292 TLVNSRPHLIDSVEQYMFIYE 312
>Z66524-8|CAH10782.1| 753|Caenorhabditis elegans Hypothetical
protein T13H5.1b protein.
Length = 753
Score = 78.6 bits (185), Expect = 4e-15
Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Frame = +2
Query: 2 TNSLVELMNMVERWRQRT----DYGPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVF 169
T L++++ M WR+R + P V+S +G SR GVY AN CI+Q+ EVDVF
Sbjct: 598 TTGLIDVIKMARSWRKRAPDRPETKPTIVMSHNGVSRVGVYIGANICIDQMDIDHEVDVF 657
Query: 170 QAVKTVRRHRPQLVENMTEYKYCYD 244
AVK +R +RPQL++ EYKY YD
Sbjct: 658 HAVKMMRINRPQLIDMKDEYKYLYD 682
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/81 (27%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +2
Query: 5 NSLVELMNMVERWRQRTDY-GPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVK 181
++ +EL V ++ ++ P+ V +G R+G + A +A +E + K G++D F+ K
Sbjct: 289 SAFIELRRRVRQFMEKNPVEAPMVVHCSNGAGRSGAFLALDANLELMKKTGQLDFFEYAK 348
Query: 182 TVRRHRPQLVENMTEYKYCYD 244
T+ RP L++++ +Y + Y+
Sbjct: 349 TLVNSRPHLIDSVEQYMFIYE 369
>Z66523-11|CAA91417.3| 696|Caenorhabditis elegans Hypothetical
protein T13H5.1a protein.
Length = 696
Score = 78.6 bits (185), Expect = 4e-15
Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Frame = +2
Query: 2 TNSLVELMNMVERWRQRT----DYGPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVF 169
T L++++ M WR+R + P V+S +G SR GVY AN CI+Q+ EVDVF
Sbjct: 541 TTGLIDVIKMARSWRKRAPDRPETKPTIVMSHNGVSRVGVYIGANICIDQMDIDHEVDVF 600
Query: 170 QAVKTVRRHRPQLVENMTEYKYCYD 244
AVK +R +RPQL++ EYKY YD
Sbjct: 601 HAVKMMRINRPQLIDMKDEYKYLYD 625
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/81 (27%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +2
Query: 5 NSLVELMNMVERWRQRTDY-GPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVK 181
++ +EL V ++ ++ P+ V +G R+G + A +A +E + K G++D F+ K
Sbjct: 232 SAFIELRRRVRQFMEKNPVEAPMVVHCSNGAGRSGAFLALDANLELMKKTGQLDFFEYAK 291
Query: 182 TVRRHRPQLVENMTEYKYCYD 244
T+ RP L++++ +Y + Y+
Sbjct: 292 TLVNSRPHLIDSVEQYMFIYE 312
>Z66523-10|CAH04723.1| 753|Caenorhabditis elegans Hypothetical
protein T13H5.1b protein.
Length = 753
Score = 78.6 bits (185), Expect = 4e-15
Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Frame = +2
Query: 2 TNSLVELMNMVERWRQRT----DYGPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVF 169
T L++++ M WR+R + P V+S +G SR GVY AN CI+Q+ EVDVF
Sbjct: 598 TTGLIDVIKMARSWRKRAPDRPETKPTIVMSHNGVSRVGVYIGANICIDQMDIDHEVDVF 657
Query: 170 QAVKTVRRHRPQLVENMTEYKYCYD 244
AVK +R +RPQL++ EYKY YD
Sbjct: 658 HAVKMMRINRPQLIDMKDEYKYLYD 682
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/81 (27%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +2
Query: 5 NSLVELMNMVERWRQRTDY-GPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVK 181
++ +EL V ++ ++ P+ V +G R+G + A +A +E + K G++D F+ K
Sbjct: 289 SAFIELRRRVRQFMEKNPVEAPMVVHCSNGAGRSGAFLALDANLELMKKTGQLDFFEYAK 348
Query: 182 TVRRHRPQLVENMTEYKYCYD 244
T+ RP L++++ +Y + Y+
Sbjct: 349 TLVNSRPHLIDSVEQYMFIYE 369
>U39997-5|AAN60515.1| 1409|Caenorhabditis elegans Clear protein 1,
isoform a protein.
Length = 1409
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Frame = +2
Query: 5 NSLVELMNMVERWRQRTDYG---PVCVVSPDGRSRAGVY-CAANACIEQVIKHGEVDVFQ 172
NSL+ L+ MV + RQ + G P+ V +G S +G++ C + + Q + +DVFQ
Sbjct: 1317 NSLMNLIEMVLQ-RQSSLMGSQAPIVVHCRNGSSESGIFICISLLWLRQKAEQ-RIDVFQ 1374
Query: 173 AVKTVRRHRPQLVENMTEYKYCY 241
VK ++ HRP + +Y +CY
Sbjct: 1375 TVKGLQSHRPMMFTRFEQYSFCY 1397
>U39997-4|AAN60516.1| 1444|Caenorhabditis elegans Clear protein 1,
isoform b protein.
Length = 1444
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Frame = +2
Query: 5 NSLVELMNMVERWRQRTDYG---PVCVVSPDGRSRAGVY-CAANACIEQVIKHGEVDVFQ 172
NSL+ L+ MV + RQ + G P+ V +G S +G++ C + + Q + +DVFQ
Sbjct: 1352 NSLMNLIEMVLQ-RQSSLMGSQAPIVVHCRNGSSESGIFICISLLWLRQKAEQ-RIDVFQ 1409
Query: 173 AVKTVRRHRPQLVENMTEYKYCY 241
VK ++ HRP + +Y +CY
Sbjct: 1410 TVKGLQSHRPMMFTRFEQYSFCY 1432
>AF047880-1|AAC27551.1| 1409|Caenorhabditis elegans CLR-1 protein.
Length = 1409
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Frame = +2
Query: 5 NSLVELMNMVERWRQRTDYG---PVCVVSPDGRSRAGVY-CAANACIEQVIKHGEVDVFQ 172
NSL+ L+ MV + RQ + G P+ V +G S +G++ C + + Q + +DVFQ
Sbjct: 1317 NSLMNLIEMVLQ-RQSSLMGSQAPIVVHCRNGSSESGIFICISLLWLRQKAEQ-RIDVFQ 1374
Query: 173 AVKTVRRHRPQLVENMTEYKYCY 241
VK ++ HRP + +Y +CY
Sbjct: 1375 TVKGLQSHRPMMFTRFEQYSFCY 1397
>AL031269-1|CAA20333.1| 122|Caenorhabditis elegans Hypothetical
protein VW02B12L.2 protein.
Length = 122
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +2
Query: 68 VCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVKTVRRHRPQLVENMTEYKYCY 241
+CVVS G RA + A I Q+ E ++F+ +KT+++ RP +E+ +Y Y
Sbjct: 16 MCVVSTFGSGRACTFIGALYAIHQLNNGVEPNIFEIMKTIKQQRPGAIESFPQYSGVY 73
>AC025726-11|AAY43987.1| 294|Caenorhabditis elegans Hypothetical
protein Y71G12B.31 protein.
Length = 294
Score = 40.7 bits (91), Expect = 9e-04
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = +2
Query: 38 RWRQRTDYGPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVKTVRRHRPQLVEN 217
R RQ T P+ V G R GV+ + I + G +D+F V R+ RP +V
Sbjct: 215 RGRQYTS--PIVVHCSAGIGRTGVFICTDNVISRFESEGIIDIFSEVNRSRQQRPSMVYT 272
Query: 218 MTEYKYCYD 244
+ +Y+ YD
Sbjct: 273 VKQYECIYD 281
>AL110499-3|CAE18038.1| 437|Caenorhabditis elegans Hypothetical
protein Y62F5A.10 protein.
Length = 437
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/80 (30%), Positives = 39/80 (48%)
Frame = +2
Query: 2 TNSLVELMNMVERWRQRTDYGPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVK 181
T S+V++MN V + + VVS +G RAG + A + + E + + VK
Sbjct: 321 TRSVVDVMNFV---KSSNGSEKLLVVSKNGCGRAGFFITLGAAFCCLNDNSEPRIGEIVK 377
Query: 182 TVRRHRPQLVENMTEYKYCY 241
+R RP VE++ +Y Y
Sbjct: 378 AIRSQRPNAVESIKQYASLY 397
>AF045642-11|AAC02584.1| 443|Caenorhabditis elegans Hypothetical
protein C17H12.5 protein.
Length = 443
Score = 38.7 bits (86), Expect = 0.003
Identities = 23/80 (28%), Positives = 41/80 (51%)
Frame = +2
Query: 2 TNSLVELMNMVERWRQRTDYGPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVK 181
T S+V++MN V + + + VVS +G RAG + + A + + E + + VK
Sbjct: 327 TRSVVDVMNFV---KTSSGTEKMLVVSKNGCGRAGFFLSLGAAFCCLNDNSEPRIGEIVK 383
Query: 182 TVRRHRPQLVENMTEYKYCY 241
+R RP V+++ +Y Y
Sbjct: 384 AIRSQRPNAVDSIKQYASIY 403
>Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical protein
C09D8.1b protein.
Length = 1467
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +2
Query: 62 GPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVKTVRRHRPQLVENMTEYKYCY 241
GP+ V G R V+ A + ++++ VDVF VK +R R +++ +Y + Y
Sbjct: 1394 GPITVHCCSGAGRTAVFIALSIILDRMRAEHVVDVFTTVKLLRTERQNMIQEPEQYHFLY 1453
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +2
Query: 56 DYGPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVKTVRRHRPQLVENMTEYKY 235
D GP+ G R G + + +E++ VD++ V +R R +V+ +Y +
Sbjct: 1102 DAGPIISHCSAGIGRTGAFIVIDCMLERLRYDNTVDIYGCVTALRAQRSYMVQTEEQYIF 1161
Query: 236 CYD 244
+D
Sbjct: 1162 IHD 1164
>Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical protein
C09D8.1a protein.
Length = 2180
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +2
Query: 62 GPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVKTVRRHRPQLVENMTEYKYCY 241
GP+ V G R V+ A + ++++ VDVF VK +R R +++ +Y + Y
Sbjct: 2107 GPITVHCCSGAGRTAVFIALSIILDRMRAEHVVDVFTTVKLLRTERQNMIQEPEQYHFLY 2166
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +2
Query: 56 DYGPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVKTVRRHRPQLVENMTEYKY 235
D GP+ G R G + + +E++ VD++ V +R R +V+ +Y +
Sbjct: 1815 DAGPIISHCSAGIGRTGAFIVIDCMLERLRYDNTVDIYGCVTALRAQRSYMVQTEEQYIF 1874
Query: 236 CYD 244
+D
Sbjct: 1875 IHD 1877
>Z49938-1|CAD59171.1| 1216|Caenorhabditis elegans Hypothetical protein
C09D8.1c protein.
Length = 1216
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +2
Query: 62 GPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVKTVRRHRPQLVENMTEYKYCY 241
GP+ V G R V+ A + ++++ VDVF VK +R R +++ +Y + Y
Sbjct: 1143 GPITVHCCSGAGRTAVFIALSIILDRMRAEHVVDVFTTVKLLRTERQNMIQEPEQYHFLY 1202
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +2
Query: 56 DYGPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVKTVRRHRPQLVENMTEYKY 235
D GP+ G R G + + +E++ VD++ V +R R +V+ +Y +
Sbjct: 851 DAGPIISHCSAGIGRTGAFIVIDCMLERLRYDNTVDIYGCVTALRAQRSYMVQTEEQYIF 910
Query: 236 CYD 244
+D
Sbjct: 911 IHD 913
>Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical protein
C09D8.1b protein.
Length = 1467
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +2
Query: 62 GPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVKTVRRHRPQLVENMTEYKYCY 241
GP+ V G R V+ A + ++++ VDVF VK +R R +++ +Y + Y
Sbjct: 1394 GPITVHCCSGAGRTAVFIALSIILDRMRAEHVVDVFTTVKLLRTERQNMIQEPEQYHFLY 1453
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +2
Query: 56 DYGPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVKTVRRHRPQLVENMTEYKY 235
D GP+ G R G + + +E++ VD++ V +R R +V+ +Y +
Sbjct: 1102 DAGPIISHCSAGIGRTGAFIVIDCMLERLRYDNTVDIYGCVTALRAQRSYMVQTEEQYIF 1161
Query: 236 CYD 244
+D
Sbjct: 1162 IHD 1164
>Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical protein
C09D8.1a protein.
Length = 2180
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +2
Query: 62 GPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVKTVRRHRPQLVENMTEYKYCY 241
GP+ V G R V+ A + ++++ VDVF VK +R R +++ +Y + Y
Sbjct: 2107 GPITVHCCSGAGRTAVFIALSIILDRMRAEHVVDVFTTVKLLRTERQNMIQEPEQYHFLY 2166
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +2
Query: 56 DYGPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVKTVRRHRPQLVENMTEYKY 235
D GP+ G R G + + +E++ VD++ V +R R +V+ +Y +
Sbjct: 1815 DAGPIISHCSAGIGRTGAFIVIDCMLERLRYDNTVDIYGCVTALRAQRSYMVQTEEQYIF 1874
Query: 236 CYD 244
+D
Sbjct: 1875 IHD 1877
>AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein.
Length = 1487
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +2
Query: 62 GPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVKTVRRHRPQLVENMTEYKYCY 241
GP+ V G R V+ A + ++++ VDVF VK +R R +++ +Y + Y
Sbjct: 1414 GPITVHCCSGAGRTAVFIALSIILDRMRAEHVVDVFTTVKLLRTERQNMIQEPEQYHFLY 1473
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +2
Query: 56 DYGPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVKTVRRHRPQLVENMTEYKY 235
D GP+ G R G + + +E++ VD++ V +R R +V+ +Y +
Sbjct: 1122 DAGPIISHCSAGIGRTGAFIVIDCMLERLRYDNTVDIYGCVTALRAQRSYMVQTEEQYIF 1181
Query: 236 CYD 244
+D
Sbjct: 1182 IHD 1184
>AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein.
Length = 2200
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +2
Query: 62 GPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVKTVRRHRPQLVENMTEYKYCY 241
GP+ V G R V+ A + ++++ VDVF VK +R R +++ +Y + Y
Sbjct: 2127 GPITVHCCSGAGRTAVFIALSIILDRMRAEHVVDVFTTVKLLRTERQNMIQEPEQYHFLY 2186
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +2
Query: 56 DYGPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVKTVRRHRPQLVENMTEYKY 235
D GP+ G R G + + +E++ VD++ V +R R +V+ +Y +
Sbjct: 1835 DAGPIISHCSAGIGRTGAFIVIDCMLERLRYDNTVDIYGCVTALRAQRSYMVQTEEQYIF 1894
Query: 236 CYD 244
+D
Sbjct: 1895 IHD 1897
>AF036688-8|AAB88314.2| 482|Caenorhabditis elegans Hypothetical
protein C24D10.1 protein.
Length = 482
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 74 VVSPDGRSRAGVYCAANACIEQV-IKHGEVDVFQAVKTVRRHRPQLVENMTEYKYCY 241
++SP G RAG + A + + K E ++ VK++R RP+ V++ +Y Y
Sbjct: 371 IISPHGAGRAGYFLALAVAVHTIDTKIAEPNIADIVKSIRTQRPRAVDSFCQYCSLY 427
>Z69664-6|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical protein
K04D7.4 protein.
Length = 1159
Score = 36.3 bits (80), Expect = 0.019
Identities = 20/80 (25%), Positives = 39/80 (48%)
Frame = +2
Query: 5 NSLVELMNMVERWRQRTDYGPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVKT 184
+S+ L++ V GPV V G R+G Y ++ +I ++V +
Sbjct: 819 SSVFPLLSFVHYTSDIHSTGPVVVHCSAGVGRSGSYILVDSMRRHLISFRRLNVQGHLTH 878
Query: 185 VRRHRPQLVENMTEYKYCYD 244
+RR R +LV+ + +Y +C++
Sbjct: 879 MRRQRAKLVQTLEQYIFCHE 898
>U28971-8|AAD31046.2| 767|Caenorhabditis elegans Related to islet
cell diabetesautoantigen protein 1 protein.
Length = 767
Score = 35.9 bits (79), Expect = 0.025
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +2
Query: 8 SLVELMNMVER-WRQRTDYGPVCVVSPDGRSRAGVYCAANACIEQVIKH-GEVDVFQAVK 181
S++E V + +R R+ V V S DG R GVYCA + ++++ ++DV V+
Sbjct: 673 SILEFRRKVNKSYRGRSS--AVLVHSWDGSGRTGVYCAVDVLCARLLRGIRQIDVVATVE 730
Query: 182 TVRRHRPQLVENMTEYKYCY 241
+R R +V ++K Y
Sbjct: 731 HLRDQRDGMVATGDQFKLVY 750
>AJ245560-1|CAB52188.1| 767|Caenorhabditis elegans IDA-1 protein
protein.
Length = 767
Score = 35.9 bits (79), Expect = 0.025
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +2
Query: 8 SLVELMNMVER-WRQRTDYGPVCVVSPDGRSRAGVYCAANACIEQVIKH-GEVDVFQAVK 181
S++E V + +R R+ V V S DG R GVYCA + ++++ ++DV V+
Sbjct: 673 SILEFRRKVNKSYRGRSS--AVLVHSWDGSGRTGVYCAVDVLCARLLRGIRQIDVVATVE 730
Query: 182 TVRRHRPQLVENMTEYKYCY 241
+R R +V ++K Y
Sbjct: 731 HLRDQRDGMVATGDQFKLVY 750
>AF126740-1|AAK14908.1| 767|Caenorhabditis elegans IA2 protein.
Length = 767
Score = 35.9 bits (79), Expect = 0.025
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +2
Query: 8 SLVELMNMVER-WRQRTDYGPVCVVSPDGRSRAGVYCAANACIEQVIKH-GEVDVFQAVK 181
S++E V + +R R+ V V S DG R GVYCA + ++++ ++DV V+
Sbjct: 673 SILEFRRKVNKSYRGRSS--AVLVHSWDGSGRTGVYCAVDVLCARLLRGIRQIDVVATVE 730
Query: 182 TVRRHRPQLVENMTEYKYCY 241
+R R +V ++K Y
Sbjct: 731 HLRDQRDGMVATGDQFKLVY 750
>Z81091-4|CAD56588.1| 287|Caenorhabditis elegans Hypothetical
protein F55H12.5 protein.
Length = 287
Score = 35.5 bits (78), Expect = 0.032
Identities = 18/77 (23%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +2
Query: 8 SLVELMNMVERWRQRTDY---GPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAV 178
S +E+ +M+E+ R+ GP+ +V DG +++G+ + ++++KHG+ +
Sbjct: 194 SAIEINDMLEKSRKYLGCPLKGPLVIVCKDGAAKSGLVAFIDTEADRLMKHGKAKHTDTI 253
Query: 179 KTVRRHRPQLVENMTEY 229
K +R R + Y
Sbjct: 254 KQIRFMRSNTFDTFDSY 270
>AC024751-4|AAK21505.1| 425|Caenorhabditis elegans Hypothetical
protein Y18H1A.1 protein.
Length = 425
Score = 35.5 bits (78), Expect = 0.032
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 74 VVSPDGRSRAGVYCAANACIEQV-IKHGEVDVFQAVKTVRRHRPQLVENMTEYKYCY 241
+VSP G RAG + A + + K E + VK++R RP+ V++ +Y Y
Sbjct: 314 IVSPRGAGRAGYFLALAVAVNTIDTKLAEPCIADIVKSIRSQRPRAVDSFCQYCSLY 370
>Z75550-6|CAA99930.1| 591|Caenorhabditis elegans Hypothetical
protein T22C1.8 protein.
Length = 591
Score = 34.7 bits (76), Expect = 0.057
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +2
Query: 5 NSLVELMNMVERWRQRTDYGPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVKT 184
NS + L+ M+ + RT GPV V G R G + A AC++ + E+D+ +
Sbjct: 295 NSTMALLRML--YIVRTASGPVTVHCSAGIGRTGTFVAIEACLQILTDGKELDLLGTCRA 352
Query: 185 VRRHRPQLVENMTEY 229
+R R ++ +Y
Sbjct: 353 LRNSRAGSIQVDIQY 367
>Z77661-8|CAB01189.1| 438|Caenorhabditis elegans Hypothetical
protein F40G12.10 protein.
Length = 438
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 74 VVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVKTVRRHRPQLVENMTEYKYCY 241
+VS G RAG + A IE++ ++ + +VR RP +E +++Y + Y
Sbjct: 338 IVSNYGAGRAGSFFVAVLAIEKLQAGEAPNIKEIALSVRSQRPAAIETLSQYMFTY 393
>Z72504-2|CAA96607.1| 430|Caenorhabditis elegans Hypothetical
protein C29E6.3 protein.
Length = 430
Score = 32.3 bits (70), Expect = 0.30
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +2
Query: 65 PVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVKTVRRHRPQLVENMTEYKYCY 241
P + S +G R +Q+ + E + + V+T+R RPQ V++ +Y Y
Sbjct: 328 PTVIASVNGSGRNAALLTLAVVEDQLTRGKEPKISEIVRTIREQRPQSVDSYIQYVSLY 386
>Z68303-2|CAA92641.2| 428|Caenorhabditis elegans Hypothetical
protein ZK809.1 protein.
Length = 428
Score = 32.3 bits (70), Expect = 0.30
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +2
Query: 65 PVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVKTVRRHRPQLVENMTEYKYCY 241
P + S +G R +Q+ + E + + V+T+R RPQ V++ +Y Y
Sbjct: 326 PTVIASVNGSGRNAALLTLAVVEDQLTRGKEPKISEIVRTIREQRPQSVDSYIQYVSLY 384
>AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily
assigned gene nameprotein 218, isoform a protein.
Length = 1136
Score = 30.7 bits (66), Expect = 0.92
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +3
Query: 471 LSCRTPLPSKPLVVPVGTALRCVALFALKTTTPRRMNAG*PLAADLEPPPSTKATS 638
LS +P P P V P ++ + + T PR M+A P A PPP T+
Sbjct: 156 LSAVSPPPPLPSVPPSKERIKRIPSYLKPTPAPRSMSATLPRARLKTPPPPPPVTN 211
>U10438-14|ABB88242.1| 441|Caenorhabditis elegans Hypothetical
protein B0280.11 protein.
Length = 441
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +2
Query: 74 VVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVKTVRRHRPQLVENMTEYKYCY 241
+VS G RAG + IE++ ++ + ++R RP +E + +Y + Y
Sbjct: 339 IVSNYGAGRAGSFLVGVQAIEKLQAGDAPNIKEIAMSIRSQRPCAIETLPQYVFTY 394
>Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical protein
F44G4.8 protein.
Length = 1367
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +2
Query: 5 NSLVELMNMVERWRQRTDYG-PVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVK 181
N +++ M + + P V G R+G + + + ++ +DVF V
Sbjct: 1249 NGIIQFSRMFRHHLPHSPHNAPTIVHCSAGVGRSGTFISIDRLLQSSSFGDPIDVFGTVC 1308
Query: 182 TVRRHRPQLVENMTEYKYCY 241
+R R Q+V+N +Y + +
Sbjct: 1309 EMRYERCQMVQNEQQYIFIH 1328
>Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical protein
F44G4.8 protein.
Length = 1367
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +2
Query: 5 NSLVELMNMVERWRQRTDYG-PVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVK 181
N +++ M + + P V G R+G + + + ++ +DVF V
Sbjct: 1249 NGIIQFSRMFRHHLPHSPHNAPTIVHCSAGVGRSGTFISIDRLLQSSSFGDPIDVFGTVC 1308
Query: 182 TVRRHRPQLVENMTEYKYCY 241
+R R Q+V+N +Y + +
Sbjct: 1309 EMRYERCQMVQNEQQYIFIH 1328
>U97017-8|AAB52356.1| 363|Caenorhabditis elegans Hypothetical
protein F47B3.1 protein.
Length = 363
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 50 RTDYGPVCVVSPDGRSRAGVYCAANACIEQVIKHGE--VDVFQAVKTVRRHRPQLVENMT 223
R + P+ V G R G A A ++ + GE + + + +K +R HRP ++N
Sbjct: 258 RGNQNPILVHCSAGIGRTGTIVAI-AYVQDKMMAGENCMAMNELIKELRSHRPWSIQNEF 316
Query: 224 EYKYCY 241
+Y Y +
Sbjct: 317 QYLYLH 322
>U97017-5|AAB52361.2| 312|Caenorhabditis elegans Hypothetical
protein F47B3.6 protein.
Length = 312
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 50 RTDYGPVCVVSPDGRSRAGVYCAANACIEQVIKHGE--VDVFQAVKTVRRHRPQLVENMT 223
R + P+ V G R G A A ++ + GE + + + +K +R HRP ++N
Sbjct: 207 RGNQNPILVHCSAGIGRTGTIVAI-AYVQDKMMAGENCMAMNELIKELRSHRPWSIQNEF 265
Query: 224 EYKYCY 241
+Y Y +
Sbjct: 266 QYLYLH 271
>Z81550-6|CAB04481.3| 578|Caenorhabditis elegans Hypothetical
protein K11E4.5a protein.
Length = 578
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 29 MVERWRQRTDYGPVCVVSPDGRSRAGVYCAANACIEQVIKHGEV 160
+VE+ R + C++ PDGR A C CIE +K G V
Sbjct: 38 VVEKAEYRCKHTNTCLIDPDGRC-ACRSCRFTKCIEAGMKIGAV 80
>Z70211-5|CAA94160.3| 578|Caenorhabditis elegans Hypothetical
protein K11E4.5a protein.
Length = 578
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 29 MVERWRQRTDYGPVCVVSPDGRSRAGVYCAANACIEQVIKHGEV 160
+VE+ R + C++ PDGR A C CIE +K G V
Sbjct: 38 VVEKAEYRCKHTNTCLIDPDGRC-ACRSCRFTKCIEAGMKIGAV 80
>Z68118-8|CAA92189.2| 289|Caenorhabditis elegans Hypothetical
protein R01E6.7 protein.
Length = 289
Score = 28.7 bits (61), Expect = 3.7
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = -3
Query: 322 FVFEFALSLFFVHIFI*IVQHVMEN*IVAVLVFGHVLDELWPVSSNSLHSLKHVHLAVLY 143
++F+F+ S F + F+ + N VAV F + + V S + VH L
Sbjct: 10 YLFQFS-STFIIRSFV--PSNAKCNSTVAVSCFAELFGMISEVCQQREISFRCVHYTFLD 66
Query: 142 DLFDARVGCAVDPGPAASI 86
+ F+ARVG D G A +
Sbjct: 67 ECFEARVG-KCDAGSVARV 84
>AF273825-1|AAG15174.1| 579|Caenorhabditis elegans nuclear receptor
NHR-71 protein.
Length = 579
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 29 MVERWRQRTDYGPVCVVSPDGRSRAGVYCAANACIEQVIKHGEV 160
+VE+ R + C++ PDGR A C CIE +K G V
Sbjct: 39 VVEKAEYRCKHTNTCLIDPDGRC-ACRSCRFTKCIEAGMKIGAV 81
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
C46C2.1b protein.
Length = 1677
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 456 PRPLVLSCRTPLPSKPLVVPVGT 524
P P + SC P+PS P VV GT
Sbjct: 1243 PTPAITSCPPPVPSVPPVVSNGT 1265
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
C46C2.1a protein.
Length = 1838
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 456 PRPLVLSCRTPLPSKPLVVPVGT 524
P P + SC P+PS P VV GT
Sbjct: 1243 PTPAITSCPPPVPSVPPVVSNGT 1265
>Z77664-2|CAB01217.1| 643|Caenorhabditis elegans Hypothetical
protein C29A12.6 protein.
Length = 643
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 22 DEHGGTLATADRLRTSLRCITGWTQPGR 105
+ HGGT TAD +R + + G P R
Sbjct: 536 ERHGGTTRTADAIRYATKIFEGKAHPAR 563
>Z73970-5|CAA98248.1| 643|Caenorhabditis elegans Hypothetical
protein C29A12.6 protein.
Length = 643
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 22 DEHGGTLATADRLRTSLRCITGWTQPGR 105
+ HGGT TAD +R + + G P R
Sbjct: 536 ERHGGTTRTADAIRYATKIFEGKAHPAR 563
>AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical
protein Y80D3A.8 protein.
Length = 1293
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/64 (23%), Positives = 31/64 (48%)
Frame = +2
Query: 8 SLVELMNMVERWRQRTDYGPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVKTV 187
S E+ +++E ++ P+ V P+G R+ + QV +++ +A+K +
Sbjct: 1176 SHAEMFDLMEMLKKSEK--PIVVQCPNGIGRSMAFIGTECLARQVEADPTIELTEALKHM 1233
Query: 188 RRHR 199
R HR
Sbjct: 1234 REHR 1237
>Z22173-1|CAA80125.1| 398|Caenorhabditis elegans Hypothetical
protein C15H7.3 protein.
Length = 398
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +2
Query: 74 VVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVKTVRRHRPQLVENMTEY 229
++S +G RAG + QV K EV+ + + ++R R +V+N+ ++
Sbjct: 315 LMSMNGTGRAGTMLTLFTAMLQVQKGKEVNAKETLASLRAERCGIVDNIDQF 366
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,678,108
Number of Sequences: 27780
Number of extensions: 185828
Number of successful extensions: 746
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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