Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0075
(392 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g43120.1 68415.m05355 pirin, putative similar to SP|O00625 Pi... 31 0.37
At2g04620.1 68415.m00470 cation efflux family protein potential ... 31 0.37
At2g36710.1 68415.m04504 pectinesterase family protein contains ... 25 1.4
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 28 2.0
At1g19790.1 68414.m02475 lateral root primordium (LRP) protein-r... 28 2.0
At2g46800.2 68415.m05840 zinc transporter (ZAT) identical to zin... 28 2.6
At2g46800.1 68415.m05839 zinc transporter (ZAT) identical to zin... 28 2.6
At3g01400.1 68416.m00063 armadillo/beta-catenin repeat family pr... 27 3.4
At1g79580.3 68414.m09279 no apical meristem (NAM) family protein... 27 3.4
At1g79580.2 68414.m09278 no apical meristem (NAM) family protein... 27 3.4
At1g79580.1 68414.m09277 no apical meristem (NAM) family protein... 27 3.4
At1g12380.1 68414.m01431 expressed protein 27 3.4
At4g36750.1 68417.m05214 quinone reductase family protein simila... 27 4.5
At3g29060.1 68416.m03635 EXS family protein / ERD1/XPR1/SYG1 fam... 27 4.5
At2g27210.1 68415.m03270 kelch repeat-containing serine/threonin... 27 4.5
At2g27200.1 68415.m03269 GTP-binding family protein contains Pfa... 27 4.5
At1g11310.1 68414.m01299 seven transmembrane MLO family protein ... 27 4.5
At1g08420.1 68414.m00931 kelch repeat-containing protein / serin... 27 4.5
At5g62440.1 68418.m07837 expressed protein 27 6.0
At2g29410.1 68415.m03574 zinc transporter, putative similar to z... 27 6.0
At1g80480.1 68414.m09427 PRLI-interacting factor L, putative sim... 27 6.0
At5g18350.1 68418.m02159 disease resistance protein (TIR-NBS-LRR... 26 7.9
At5g05190.1 68418.m00553 expressed protein similar to unknown pr... 26 7.9
At4g35165.1 68417.m04999 hypothetical protein 26 7.9
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 26 7.9
At3g51530.1 68416.m05643 F-box family protein various predicted ... 26 7.9
At2g16910.1 68415.m01948 basic helix-loop-helix (bHLH) family pr... 26 7.9
At1g64600.1 68414.m07322 expressed protein similar to Hypothetic... 26 7.9
At1g40129.1 68414.m04766 hypothetical protein 26 7.9
At1g05310.1 68414.m00538 pectinesterase family protein contains ... 26 7.9
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 26 7.9
>At2g43120.1 68415.m05355 pirin, putative similar to SP|O00625 Pirin
{Homo sapiens}; contains Pfam profile PF02678: Pirin
Length = 321
Score = 30.7 bits (66), Expect = 0.37
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +1
Query: 43 IFLGLIAAVTAFPGIIHDEAPQVEAKYDHQSLIGESGHHHQIEHEHAK-SHQSIKFEHFH 219
I+ G + +TA GIIH E P+ E Q I S + IE + + SH I +
Sbjct: 116 IYAGDVQWMTAGRGIIHSEMPEEEVNKGLQLWINLSSNEKMIEPNYQELSHSDIPKAEQN 175
Query: 220 PVPVYVKKEHSHLLKHPL 273
V V V S ++ P+
Sbjct: 176 GVEVKVIAGESMGIQSPV 193
>At2g04620.1 68415.m00470 cation efflux family protein potential
member of the cation diffusion facilitator (CDF) family,
or cation efflux (CE) family, see PMID:11500563
Length = 798
Score = 30.7 bits (66), Expect = 0.37
Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
Frame = +1
Query: 91 HDEAPQVEAKYDHQSLIGESGHHHQIEHEHAKSHQSIKFEHFHPVPVY--VKKEHSHLLK 264
H+E Q + H+ HHH H+H + + + EH + H H
Sbjct: 579 HEEHHQHSDSHKHEEHHEHDHHHHSHSHKHEECNHNHDHEHQSHSHNHEECNHNHDHHSD 638
Query: 265 HPLEKGKSEQNLKLIH 312
H EK + +++ + H
Sbjct: 639 HQPEKSEKKEHRHIDH 654
Score = 30.3 bits (65), Expect = 0.49
Identities = 14/55 (25%), Positives = 23/55 (41%)
Frame = +1
Query: 91 HDEAPQVEAKYDHQSLIGESGHHHQIEHEHAKSHQSIKFEHFHPVPVYVKKEHSH 255
H ++ + E + H HH H H+ SH+ + H H + + HSH
Sbjct: 573 HSDSHKHEEHHQHSDSHKHEEHHEHDHHHHSHSHKHEECNHNHD---HEHQSHSH 624
Score = 29.1 bits (62), Expect = 1.1
Identities = 22/87 (25%), Positives = 31/87 (35%), Gaps = 3/87 (3%)
Frame = +1
Query: 82 GIIHDEAPQVEAKYDHQSLIGESGHHHQIEHEHAKSHQSIKFEHFHPVPVYVKKEHSHLL 261
G H + Q + + + H H+ H+H+ SH K E H + HSH
Sbjct: 553 GCTHSHSHQSHSHKNEEHHQHSDSHKHEEHHQHSDSH---KHEEHHE---HDHHHHSHSH 606
Query: 262 KHP---LEKGKSEQNLKLIHPETEHKH 333
KH Q+ H E H H
Sbjct: 607 KHEECNHNHDHEHQSHSHNHEECNHNH 633
>At2g36710.1 68415.m04504 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 407
Score = 24.6 bits (51), Expect(2) = 1.4
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +1
Query: 154 HHHQIEHEHAKSHQSIK 204
HHH H H H+ IK
Sbjct: 56 HHHHHHHHHYHHHEPIK 72
Score = 22.6 bits (46), Expect(2) = 1.4
Identities = 8/27 (29%), Positives = 11/27 (40%)
Frame = +1
Query: 100 APQVEAKYDHQSLIGESGHHHQIEHEH 180
A + A + + G HHH H H
Sbjct: 35 ATTIGALAKYSTFFGHKHHHHHHHHHH 61
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 28.3 bits (60), Expect = 2.0
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -3
Query: 267 MLEKVAVLLLHVHRNGVEVFELDRLVRFGVFVLN 166
+LEK+ +LL + NG EL+ +VRF + N
Sbjct: 1590 VLEKLVILLRCILENGFLTPELEDVVRFAIMTFN 1623
>At1g19790.1 68414.m02475 lateral root primordium (LRP)
protein-related similar to lateral root primordium 1
(LRP1) [Arabidopsis thaliana] GI:882341; contains Pfam
profile PF05142: Domain of unknown function (DUF702)
Length = 345
Score = 28.3 bits (60), Expect = 2.0
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 76 FPGIIHDEAPQVEAKYDHQSLIGESGHHHQI 168
F GI++D+ P + SL GE+ H H +
Sbjct: 261 FKGILYDQGPSSDHHRYSSSLNGETSHQHHL 291
>At2g46800.2 68415.m05840 zinc transporter (ZAT) identical to zinc
transporter ZAT [Arabidopsis thaliana]
gi|4206640|gb|AAD11757; member of the cation diffusion
facilitator (CDF) family, or cation efflux (CE) family,
PMID:11500563
Length = 398
Score = 27.9 bits (59), Expect = 2.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 121 YDHQSLIGESGHHHQIEHEHAKSH 192
++H + + HHH +HEH SH
Sbjct: 199 HNHSHGVTVTTHHHHHDHEHGHSH 222
Score = 26.6 bits (56), Expect = 6.0
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +1
Query: 151 GHHHQIEHEHAKSHQSIKFEHFHPVPVYVKKEHSHLLKHPLEKGKSE 291
GH H H H H H H V V H H +H G E
Sbjct: 181 GHDHGHSHGHGHGHGHDHHNHSHGVTV-TTHHHHHDHEHGHSHGHGE 226
>At2g46800.1 68415.m05839 zinc transporter (ZAT) identical to zinc
transporter ZAT [Arabidopsis thaliana]
gi|4206640|gb|AAD11757; member of the cation diffusion
facilitator (CDF) family, or cation efflux (CE) family,
PMID:11500563
Length = 398
Score = 27.9 bits (59), Expect = 2.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 121 YDHQSLIGESGHHHQIEHEHAKSH 192
++H + + HHH +HEH SH
Sbjct: 199 HNHSHGVTVTTHHHHHDHEHGHSH 222
Score = 26.6 bits (56), Expect = 6.0
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +1
Query: 151 GHHHQIEHEHAKSHQSIKFEHFHPVPVYVKKEHSHLLKHPLEKGKSE 291
GH H H H H H H V V H H +H G E
Sbjct: 181 GHDHGHSHGHGHGHGHDHHNHSHGVTV-TTHHHHHDHEHGHSHGHGE 226
>At3g01400.1 68416.m00063 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeats (4 copies)
Length = 355
Score = 27.5 bits (58), Expect = 3.4
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +3
Query: 222 RSCVREEGAQPPSQASS*KGKIRAKPQADSS*D*TQARRWTCPRGGAR 365
R+ V EGA PP A S G RAK +A++ + + R + GGAR
Sbjct: 304 RTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQPR-SISNGGAR 350
>At1g79580.3 68414.m09279 no apical meristem (NAM) family protein
similar to OsNAC7 protein (GI:6730944) [Oryza sativa];
contains weak hit to Pfam PF02365 : No apical meristem
(NAM) protein
Length = 371
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 151 GHHHQIEHEHAKSHQSIKFEHFHPVPVYV---KKEHSHLLKHPLE 276
G H + E +H HQ I + H ++ HS L+ HPL+
Sbjct: 172 GFHQEQEQDHHHHHQYISTNNDHDHHHHIDSNSNNHSPLILHPLD 216
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/48 (22%), Positives = 21/48 (43%)
Frame = +1
Query: 190 HQSIKFEHFHPVPVYVKKEHSHLLKHPLEKGKSEQNLKLIHPETEHKH 333
HQ + +H H Y+ + H H ++ + + ++HP H H
Sbjct: 174 HQEQEQDHHHHHQ-YISTNNDHDHHHHIDSNSNNHSPLILHPLDHHHH 220
>At1g79580.2 68414.m09278 no apical meristem (NAM) family protein
similar to OsNAC7 protein (GI:6730944) [Oryza sativa];
contains weak hit to Pfam PF02365 : No apical meristem
(NAM) protein
Length = 371
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 151 GHHHQIEHEHAKSHQSIKFEHFHPVPVYV---KKEHSHLLKHPLE 276
G H + E +H HQ I + H ++ HS L+ HPL+
Sbjct: 172 GFHQEQEQDHHHHHQYISTNNDHDHHHHIDSNSNNHSPLILHPLD 216
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/48 (22%), Positives = 21/48 (43%)
Frame = +1
Query: 190 HQSIKFEHFHPVPVYVKKEHSHLLKHPLEKGKSEQNLKLIHPETEHKH 333
HQ + +H H Y+ + H H ++ + + ++HP H H
Sbjct: 174 HQEQEQDHHHHHQ-YISTNNDHDHHHHIDSNSNNHSPLILHPLDHHHH 220
>At1g79580.1 68414.m09277 no apical meristem (NAM) family protein
similar to OsNAC7 protein (GI:6730944) [Oryza sativa];
contains weak hit to Pfam PF02365 : No apical meristem
(NAM) protein
Length = 371
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 151 GHHHQIEHEHAKSHQSIKFEHFHPVPVYV---KKEHSHLLKHPLE 276
G H + E +H HQ I + H ++ HS L+ HPL+
Sbjct: 172 GFHQEQEQDHHHHHQYISTNNDHDHHHHIDSNSNNHSPLILHPLD 216
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/48 (22%), Positives = 21/48 (43%)
Frame = +1
Query: 190 HQSIKFEHFHPVPVYVKKEHSHLLKHPLEKGKSEQNLKLIHPETEHKH 333
HQ + +H H Y+ + H H ++ + + ++HP H H
Sbjct: 174 HQEQEQDHHHHHQ-YISTNNDHDHHHHIDSNSNNHSPLILHPLDHHHH 220
>At1g12380.1 68414.m01431 expressed protein
Length = 793
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/54 (22%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +1
Query: 37 YHIFLGLIAAVTAFPGIIHDEAPQVEAKYDH-----QSLIGESGHHHQIEHEHA 183
+++ ++++ A ++HD+A +V DH + ++G+ G +++E HA
Sbjct: 485 FNLLEDVLSSARAIQLVVHDDACKVVLMEDHMAREVREMVGDEGFWNEVEAVHA 538
>At4g36750.1 68417.m05214 quinone reductase family protein similar
to 1,4-benzoquinone reductase [Phanerochaete
chrysosporium][GI:4454993]; similar to Trp repressor
binding protein [Escherichia coli][SP|P30849]; contains
flavodoxin domain PF00258
Length = 273
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 296 FCSDFPFSRGCLRRWLCSFFTYTGTGWKCSNL 201
F FP GC+ + +FF TG+ WK +L
Sbjct: 145 FLFGFPTRYGCMAAQMKAFFDSTGSLWKEQSL 176
>At3g29060.1 68416.m03635 EXS family protein / ERD1/XPR1/SYG1 family
protein similar to PHO1 protein [Arabidopsis thaliana]
GI:20069032; contains Pfam profiles PF03105: SPX domain,
PF03124: EXS family
Length = 794
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/41 (24%), Positives = 18/41 (43%)
Frame = +1
Query: 58 IAAVTAFPGIIHDEAPQVEAKYDHQSLIGESGHHHQIEHEH 180
I+ AF G+ + + + + H + + HHH H H
Sbjct: 80 ISLYRAFSGLTNRASRSPKKSHKHHNPLSSKRHHHHHNHHH 120
>At2g27210.1 68415.m03270 kelch repeat-containing serine/threonine
phosphoesterase family protein similar to SP|P48482
Serine/threonine protein phosphatase PP1 isozyme 2 (EC
3.1.3.16) {Arabidopsis thaliana}; contains Pfam profile
PF00149: Calcineurin-like phosphoesterase
Length = 1006
Score = 27.1 bits (57), Expect = 4.5
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -3
Query: 117 RFDLGSFIMYYSRKSSHCGNESQEDMVLHLGR*ITVVP 4
RF G I +S +++CG + +L LGR + VVP
Sbjct: 916 RFAQGHLITLFSA-TNYCGTANNAGAILVLGRDLVVVP 952
>At2g27200.1 68415.m03269 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 537
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Frame = +1
Query: 241 KEHSHLLKHPLEKGKS--EQNLKLIHPETE 324
K H+H+++ EKGKS +Q+ K++ TE
Sbjct: 15 KHHNHMIQETKEKGKSYKDQHKKVLESVTE 44
>At1g11310.1 68414.m01299 seven transmembrane MLO family protein /
MLO-like protein 2 (MLO2) idenctical to membrane protein
Mlo2 [Arabidopsis thaliana] gi|14091574|gb|AAK53795;
similar to Mlo [Hordeum vulgare subsp. vulgare]
gi|1877221|emb|CAB06083 SWISS-PROT:P93766
Length = 573
Score = 27.1 bits (57), Expect = 4.5
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 196 SIKFEH-FHPVPVYVKKEHSHLLKHPLEKGKSE 291
SI EH H + + KK+H L LEK K+E
Sbjct: 29 SIVLEHSIHKIGTWFKKKHKQALFEALEKVKAE 61
>At1g08420.1 68414.m00931 kelch repeat-containing protein /
serine/threonine phosphoesterase family protein contains
Pfam profiles: PF00149 calcineurin-like phosphoesterase,
PF01344 kelch motif
Length = 1018
Score = 27.1 bits (57), Expect = 4.5
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -3
Query: 117 RFDLGSFIMYYSRKSSHCGNESQEDMVLHLGR*ITVVP 4
RF G I +S +++CG + +L LGR + VVP
Sbjct: 927 RFAQGHLITLFSA-TNYCGTANNAGAILVLGRDLVVVP 963
>At5g62440.1 68418.m07837 expressed protein
Length = 202
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 199 IKFEHFHPVPVYVKKEHSHLLKHPLEKGKSEQNLKL 306
+KF HF P + V K +L ++KG SE K+
Sbjct: 85 VKFLHFWPTDLDVNKYEHMVLLDLIKKGHSEPEKKI 120
>At2g29410.1 68415.m03574 zinc transporter, putative similar to zinc
transporter ZAT [Arabidopsis thaliana]
gi|4206640|gb|AAD11757; similar to zinc transporter
ZnT-2 [Rattus norvegicus] gi|1256378|gb|AAB02775; member
of the cation diffusion facilitator (CDF) family, or
cation efflux (CE) family, PMID:11500563
Length = 375
Score = 26.6 bits (56), Expect = 6.0
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = +1
Query: 139 IGESGHHHQIEHEHAKSHQSIKFEHFHPVPVYVKKEHSHLLKHPLEKGKSEQNLKLIHPE 318
+G + HH H+H H + K +H H V +E + +PL+ KS I+ +
Sbjct: 180 LGHNHSHHH--HDHHHHHHNHKHQHQHHHKEVVAEEEEEEM-NPLKGEKSSSKEMNINIQ 236
Query: 319 TEHKH 333
+ H
Sbjct: 237 GAYLH 241
>At1g80480.1 68414.m09427 PRLI-interacting factor L, putative
similar to PRLI-interacting factor L [Arabidopsis
thaliana] GI:11139268; contains Pfam profile PF02492:
Cobalamin synthesis protein/P47K
Length = 444
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/37 (27%), Positives = 14/37 (37%)
Frame = +1
Query: 145 ESGHHHQIEHEHAKSHQSIKFEHFHPVPVYVKKEHSH 255
+ G HH +H+H H H H + H H
Sbjct: 307 DKGDHHDHDHDHHHDHNHDHDHHHHDGHDHHHHSHDH 343
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/37 (29%), Positives = 14/37 (37%)
Frame = +1
Query: 91 HDEAPQVEAKYDHQSLIGESGHHHQIEHEHAKSHQSI 201
HD +DH G HHH +H H S+
Sbjct: 316 HDHHHDHNHDHDHHHHDGHDHHHHSHDHTHDPGVSSV 352
>At5g18350.1 68418.m02159 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1193
Score = 26.2 bits (55), Expect = 7.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 195 VDQVRTLPPRSCVREEGAQPPS 260
+D +R PR C E G +PP+
Sbjct: 248 IDDIRLTYPRRCYGESGLKPPT 269
>At5g05190.1 68418.m00553 expressed protein similar to unknown
protein (emb|CAB88044.1)
Length = 615
Score = 26.2 bits (55), Expect = 7.9
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +1
Query: 124 DHQSLIGESGHHHQIEHEHAKSHQSIKFEHFHP 222
DHQ +GHHH+++ + Q + H P
Sbjct: 461 DHQRN-RHAGHHHELQTRRLRERQRVAKRHVRP 492
>At4g35165.1 68417.m04999 hypothetical protein
Length = 120
Score = 26.2 bits (55), Expect = 7.9
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 43 IFLGLIAAVTAFPGIIHDEAPQVEAKY 123
+ + L AA+ PGI HDE P +++
Sbjct: 13 LVVALCAAILITPGIAHDEQPPPRSQF 39
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 5/31 (16%)
Frame = -1
Query: 281 PFSRGCLRRW-----LCSFFTYTGTGWKCSN 204
P RG +R W L + YTG GW+ N
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGN 87
>At3g51530.1 68416.m05643 F-box family protein various predicted
proteins, Arabidopsis thaliana; contains Pfam profile
PF00646: F-box domain
Length = 455
Score = 26.2 bits (55), Expect = 7.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 238 KKEHSHLLKHPLEKGKSEQNLKLIHPETEHKH 333
K E +LL H L+ Q LKLI ET H++
Sbjct: 327 KVEWWNLLTHMLDSSPKLQVLKLIDRETRHEN 358
>At2g16910.1 68415.m01948 basic helix-loop-helix (bHLH) family
protein
Length = 571
Score = 26.2 bits (55), Expect = 7.9
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 82 GIIHDEAPQVEAKY--DHQSLIGESGHHHQIEHEHAKSHQSIKFEHFH 219
G + +E +V+ ++ DHQ +GHHH +H+ +QS H H
Sbjct: 521 GSMQNEKNEVDYQHYDDHQH---HNGHHHPFDHQ---MNQSAHHHHHH 562
>At1g64600.1 68414.m07322 expressed protein similar to Hypothetical
72.2 kDa protein in RPS27A-GPM1 intergenic region
(Swiss-Prot:P36056) [Saccharomyces cerevisiae]
Length = 537
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/47 (25%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -2
Query: 184 WRVRAQF-DDGVQIHQSKTGGRISLRLGELHHVLFQEKQSLRQ*VPG 47
W+++ + D G+Q +T I+ R+ + V ++ +R+ VPG
Sbjct: 87 WKIQTVYGDSGLQYRDGETAAYIASRMPAVFSVCYRVLIEIRRRVPG 133
>At1g40129.1 68414.m04766 hypothetical protein
Length = 567
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 145 ESGHHHQIEHEHAKSHQSIKFEHFHPV 225
E H H +EHE+ K+ S K E+ H V
Sbjct: 244 EPKHCHTMEHENDKTEGSTKEENHHLV 270
>At1g05310.1 68414.m00538 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 393
Score = 26.2 bits (55), Expect = 7.9
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +1
Query: 49 LGLIAAVTAFPGIIHDEAPQVEA-KYDHQSLIGESGHHHQIEHEHAKSHQ 195
+ ++A+ T F H EA ++A Y + + + HHH H H H+
Sbjct: 15 IAVLASKTLFK--THPEAFGIKAISYSFKKSLCDHHHHHHHHHHHHHRHK 62
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -3
Query: 267 MLEKVAVLLLHVHRNGVEVFELDRLVRFGVFVLN 166
+LEK+ VLL + +G EL+ +VRF + N
Sbjct: 1636 VLEKLVVLLGCILEDGFLTSELENVVRFVIMTFN 1669
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,253,461
Number of Sequences: 28952
Number of extensions: 195115
Number of successful extensions: 675
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 567552648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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