Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0072
         (470 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_46556| Best HMM Match : CDtoxinA (HMM E-Value=1.1)                  28   3.4  
SB_29103| Best HMM Match : APC10 (HMM E-Value=0.00051)                 27   7.8  

>SB_46556| Best HMM Match : CDtoxinA (HMM E-Value=1.1)
          Length = 208

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = +2

Query: 188 LRTASLHHYVLYI*NKSIQINNCIALRSINIYITFIFHSLS 310
           LR+ +LH  V +   +SI ++ C+ LRSI ++    F S++
Sbjct: 13  LRSITLHECVTF---RSITMHECVTLRSITLHECVTFWSIT 50


>SB_29103| Best HMM Match : APC10 (HMM E-Value=0.00051)
          Length = 717

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 14/50 (28%), Positives = 21/50 (42%)
 Frame = +3

Query: 294 FFTAYQNCCRYKNIQTYENIVDKS*SRRRVGFAKGTPQWKLLLEWKLRTR 443
           F   +   C  +    Y    D S ++RR     GT +W L L++K   R
Sbjct: 611 FTVEFDPRCETERKYDYLEFTDSSGNKRRFDQKVGTDKWPLTLQFKAGNR 660


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,807,165
Number of Sequences: 59808
Number of extensions: 208953
Number of successful extensions: 446
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 445
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 982083920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)