Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0072
(470 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 22 2.9
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 22 2.9
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 22 3.8
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 21 5.0
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 5.0
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 21 5.0
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 5.0
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 5.0
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 5.0
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 21 5.0
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 5.0
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 5.0
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 21 5.0
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 21 6.7
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 21 6.7
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 21 6.7
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 21 6.7
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 22.2 bits (45), Expect = 2.9
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = -3
Query: 372 DFSFCPLYFHTFGY 331
D CP+Y +F Y
Sbjct: 126 DIQICPIYIESFSY 139
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 22.2 bits (45), Expect = 2.9
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3
Query: 372 DFSFCPLYFHTFGYFCND 319
D CPL F +FGY D
Sbjct: 140 DTQRCPLQFGSFGYTKRD 157
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 21.8 bits (44), Expect = 3.8
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -2
Query: 301 VKNKCYIYIYGS*CYAIVYLN*FILNIKYVMM*TSC 194
+ NK +Y+YGS + + F N+K + T C
Sbjct: 500 LSNKLAMYLYGSIDSSKINYRIFKANVKEAVKDTXC 535
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.4 bits (43), Expect = 5.0
Identities = 9/39 (23%), Positives = 21/39 (53%)
Frame = +2
Query: 155 TQNKLNFPYH*LRTASLHHYVLYI*NKSIQINNCIALRS 271
T +LNFP + + ++ + Y + +NN ++++S
Sbjct: 439 TTEELNFPGVSIESVTVDKLITYFDHFESMLNNGVSIQS 477
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 5.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 241 SNKQLHSIKIHKYIYN 288
SNK +H+ +KY YN
Sbjct: 86 SNKTIHNNNNYKYNYN 101
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 5.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 241 SNKQLHSIKIHKYIYN 288
SNK +H+ +KY YN
Sbjct: 86 SNKTIHNNNNYKYNYN 101
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 5.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 241 SNKQLHSIKIHKYIYN 288
SNK +H+ +KY YN
Sbjct: 86 SNKTIHNNNNYKYNYN 101
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 5.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 241 SNKQLHSIKIHKYIYN 288
SNK +H+ +KY YN
Sbjct: 86 SNKTIHNNNNYKYNYN 101
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 5.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 241 SNKQLHSIKIHKYIYN 288
SNK +H+ +KY YN
Sbjct: 86 SNKTIHNNNNYKYNYN 101
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.4 bits (43), Expect = 5.0
Identities = 9/39 (23%), Positives = 21/39 (53%)
Frame = +2
Query: 155 TQNKLNFPYH*LRTASLHHYVLYI*NKSIQINNCIALRS 271
T +LNFP + + ++ + Y + +NN ++++S
Sbjct: 439 TTEELNFPGVSIESVTVDKLITYFDHFESMLNNGVSIQS 477
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 5.0
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 358 TKAEVVAASGSLKALRSGNYYSSGNYER 441
+K + +S S S NYY++ NY++
Sbjct: 298 SKEPKIISSLSNSCNYSNNYYNNNNYKK 325
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.4 bits (43), Expect = 5.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 241 SNKQLHSIKIHKYIYN 288
SNK +H+ +KY YN
Sbjct: 319 SNKTIHNNNNYKYNYN 334
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 21.4 bits (43), Expect = 5.0
Identities = 9/39 (23%), Positives = 21/39 (53%)
Frame = +2
Query: 155 TQNKLNFPYH*LRTASLHHYVLYI*NKSIQINNCIALRS 271
T +LNFP + + ++ + Y + +NN ++++S
Sbjct: 65 TTEELNFPGVSIESVTVDKLITYFDHFESMLNNGVSIQS 103
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.0 bits (42), Expect = 6.7
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -3
Query: 354 LYFHTFGYFCNDNNFDKL 301
L+ F FC D+ +DK+
Sbjct: 69 LFGRMFFEFCQDSGYDKI 86
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.0 bits (42), Expect = 6.7
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = +2
Query: 359 QKLKSSPRRVR*RHSAVEIITRVEITNENSTVT 457
Q + P + + + + + VE+++EN TVT
Sbjct: 107 QPYRPHPHNLVGKEACKQGVCTVEVSSENMTVT 139
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.0 bits (42), Expect = 6.7
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = +2
Query: 359 QKLKSSPRRVR*RHSAVEIITRVEITNENSTVT 457
Q + P + + + + + VE+++EN TVT
Sbjct: 107 QPYRPHPHNLVGKEACKQGVCTVEVSSENMTVT 139
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.0 bits (42), Expect = 6.7
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -3
Query: 354 LYFHTFGYFCNDNNFDKL 301
L+ F FC D+ +DK+
Sbjct: 69 LFGRMFFEFCQDSGYDKI 86
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,455
Number of Sequences: 438
Number of extensions: 2302
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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