Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0071
         (797 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.7  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    23   3.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
 Frame = -3

Query: 228 LELLFCFCTVLIFKVNFRYLSRLRISCIVWFRRCIYLY**YVVDV*FGT-----ICIHST 64
           L LLF  C    +     +   L   C++    CIY +  Y   + F       +CI+  
Sbjct: 204 LHLLFLPCIYYFYSAFIIFTIHLLFYCVLIILLCIYYF--YYAFILFTVHLLLLVCIYYF 261

Query: 63  KYVNSVLNKCTFI 25
            Y++ +L  C FI
Sbjct: 262 YYMH-LLFCCAFI 273


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 480 NLFYSRLADPADFAVPQSINKRPNTFV*NKLKTNKK 587
           NL Y R+  P+D  V  SI    + +    +K N+K
Sbjct: 502 NLTYLRIGAPSDVTVETSIRSTASFWDSLPIKENEK 537


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 388 RRRDGKSQQLQLTGNRKSLRLSDAYHKFK 474
           RRR  + ++ +    RK L L  A H+FK
Sbjct: 587 RRRQTREKRKKSLPVRKLLELERAQHEFK 615


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,103
Number of Sequences: 336
Number of extensions: 3101
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)