Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0070
         (454 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1742 - 39585879-39585994,39586089-39586238,39586288-395863...    27   9.3  

>01_06_1742 - 39585879-39585994,39586089-39586238,39586288-39586375,
            39586479-39586640,39586753-39586877,39586992-39587030,
            39587290-39587476,39587643-39587713,39589371-39589564,
            39589656-39589767,39589899-39590082,39590177-39590503,
            39590780-39591061,39591148-39591621,39591730-39591813,
            39591850-39591939,39592024-39592247,39592503-39592600,
            39592679-39593169,39593249-39593520,39594266-39594522,
            39594672-39594890,39595007-39595167,39595249-39595441,
            39595528-39595633,39595947-39596121,39596404-39596556,
            39596663-39596794,39597120-39597184,39597754-39597819,
            39598433-39598511,39598587-39598767,39598864-39598976
          Length = 1889

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 7/53 (13%)
 Frame = -2

Query: 147  DILNSNYVF-FNCFTNASELFDIRNVSI---NIFQYFIRYS---YFRHSSNLI 10
            DIL + Y+F  +  TN  EL D+R+ S+   N  Q  ++++   + +HSS L+
Sbjct: 1222 DILLTRYLFNSHKDTNEGELTDLRSASVNNENFAQVAVKHNFHHFLQHSSGLL 1274


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,331,700
Number of Sequences: 37544
Number of extensions: 117502
Number of successful extensions: 226
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 226
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 883560296
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)