Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0069
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.4  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.4  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.4  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.4  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.1  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   4.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   4.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.6  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.6  

>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 270 YGGYQDLKGSTNELW 314
           YGG +DL+ + N+LW
Sbjct: 72  YGGVKDLRITPNKLW 86


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 270 YGGYQDLKGSTNELW 314
           YGG +DL+ + N+LW
Sbjct: 72  YGGVKDLRITPNKLW 86


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 270 YGGYQDLKGSTNELW 314
           YGG +DL+ + N+LW
Sbjct: 72  YGGVKDLRITPNKLW 86


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 270 YGGYQDLKGSTNELW 314
           YGG +DL+ + N+LW
Sbjct: 72  YGGVKDLRITPNKLW 86


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 270 YGGYQDLKGSTNELW 314
           YGG +DL+ + N+LW
Sbjct: 72  YGGVKDLRITPNKLW 86


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 564 IFGGDSHSHPHNDLWRFHFATETW 635
           +F  D  SH H  +W     ++TW
Sbjct: 453 VFLNDFISHQHAWIWLLWLLSQTW 476


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 564 IFGGDSHSHPHNDLWRFHFATETW 635
           +F  D  SH H  +W     ++TW
Sbjct: 453 VFLNDFISHQHAWIWLLWLLSQTW 476


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 564 IFGGDSHSHPHNDLWRFHFATETW 635
           +F  D  SH H  +W     ++TW
Sbjct: 453 VFLNDFISHQHAWIWLLWLLSQTW 476


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 564 IFGGDSHSHPHNDLWRFHFATETW 635
           +F  D  SH H  +W     ++TW
Sbjct: 453 VFLNDFISHQHAWIWLLWLLSQTW 476


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 185 REGPSWRCQWTSRSEGTH 238
           ++G ++R QW + + GTH
Sbjct: 224 QQGNTFRYQWIAGNAGTH 241


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 185 REGPSWRCQWTSRSEGTH 238
           ++G ++R QW + + GTH
Sbjct: 224 QQGNTFRYQWIAGNAGTH 241


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 158  HLAGKLAPDLCLCIVYPERGLVGER 84
            +L   + PDLC  IVY    L G++
Sbjct: 1842 YLPSDIDPDLCTHIVYGFAVLNGDQ 1866


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/19 (31%), Positives = 10/19 (52%)
 Frame = +3

Query: 309 LWAFHYESESWHQVRTWNP 365
           +W     S++W  V  W+P
Sbjct: 220 IWLVWLLSQAWISVHIWSP 238


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/19 (31%), Positives = 10/19 (52%)
 Frame = +3

Query: 309 LWAFHYESESWHQVRTWNP 365
           +W     S++W  V  W+P
Sbjct: 453 IWLVWLLSQAWISVHIWSP 471


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/19 (31%), Positives = 10/19 (52%)
 Frame = +3

Query: 309 LWAFHYESESWHQVRTWNP 365
           +W     S++W  V  W+P
Sbjct: 453 IWLVWLLSQAWISVHIWSP 471


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,735
Number of Sequences: 336
Number of extensions: 3023
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)