Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0069
         (694 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholi...    24   1.6  
EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholi...    24   1.6  
EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholi...    24   1.6  
EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholi...    24   1.6  
EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholi...    24   1.6  
EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholi...    24   1.6  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    24   1.6  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    24   1.6  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   4.8  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   6.4  

>EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 6 protein.
          Length = 461

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 270 YGGYQDLKGSTNELW 314
           YGG +DL+ + N+LW
Sbjct: 55  YGGVKDLRITPNKLW 69


>EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 5 protein.
          Length = 461

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 270 YGGYQDLKGSTNELW 314
           YGG +DL+ + N+LW
Sbjct: 55  YGGVKDLRITPNKLW 69


>EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 4 protein.
          Length = 461

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 270 YGGYQDLKGSTNELW 314
           YGG +DL+ + N+LW
Sbjct: 55  YGGVKDLRITPNKLW 69


>EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 3 protein.
          Length = 461

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 270 YGGYQDLKGSTNELW 314
           YGG +DL+ + N+LW
Sbjct: 55  YGGVKDLRITPNKLW 69


>EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 2 protein.
          Length = 461

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 270 YGGYQDLKGSTNELW 314
           YGG +DL+ + N+LW
Sbjct: 55  YGGVKDLRITPNKLW 69


>EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 1 protein.
          Length = 461

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 270 YGGYQDLKGSTNELW 314
           YGG +DL+ + N+LW
Sbjct: 55  YGGVKDLRITPNKLW 69


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 270 YGGYQDLKGSTNELW 314
           YGG +DL+ + N+LW
Sbjct: 123 YGGVKDLRITPNKLW 137


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 270 YGGYQDLKGSTNELW 314
           YGG +DL+ + N+LW
Sbjct: 123 YGGVKDLRITPNKLW 137


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 6/23 (26%), Positives = 16/23 (69%)
 Frame = -1

Query: 643 MCSHVSVAK*NRHRSLCGCECES 575
           +CS +S +  + +++LC C+ ++
Sbjct: 655 LCSEISESYSSNNKTLCKCDAQN 677


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 682 VSVRGEGHFTVLGMCSHV 629
           V+V G GH +  GM SH+
Sbjct: 292 VTVLGWGHTSFNGMLSHI 309


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,018
Number of Sequences: 438
Number of extensions: 3802
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)