BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0068
(700 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021372-1|AAX33520.1| 2286|Drosophila melanogaster LP05745p pro... 39 0.008
AY119021-1|AAM50881.1| 688|Drosophila melanogaster LP04696p pro... 39 0.008
AE014134-3630|EAA46011.1| 2286|Drosophila melanogaster CG18140-P... 39 0.008
AY051988-1|AAK93412.1| 1013|Drosophila melanogaster LD45559p pro... 33 0.37
AE014296-558|AAF47714.2| 983|Drosophila melanogaster CG1869-PA ... 33 0.37
AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA... 32 0.65
AE014134-2186|ABI31310.1| 893|Drosophila melanogaster CG31761-P... 31 2.0
AY069683-1|AAL39828.1| 993|Drosophila melanogaster LD45449p pro... 29 4.6
AE014298-2035|AAF48374.1| 993|Drosophila melanogaster CG9411-PA... 29 4.6
AY075429-1|AAL68245.1| 1384|Drosophila melanogaster LD47780p pro... 29 6.1
AE014135-123|AAX52511.1| 1384|Drosophila melanogaster CG31992-PH... 29 6.1
AE014135-122|AAX52510.1| 1384|Drosophila melanogaster CG31992-PG... 29 6.1
AE014135-121|AAN06509.1| 1384|Drosophila melanogaster CG31992-PF... 29 6.1
AE014135-120|AAN06508.1| 1384|Drosophila melanogaster CG31992-PE... 29 6.1
AE014135-119|AAN06507.1| 1384|Drosophila melanogaster CG31992-PD... 29 6.1
AE014135-118|AAF59324.2| 1384|Drosophila melanogaster CG31992-PC... 29 6.1
AE014135-117|AAF59322.2| 1384|Drosophila melanogaster CG31992-PB... 29 6.1
AE014135-116|AAF59323.2| 1384|Drosophila melanogaster CG31992-PA... 29 6.1
Y00843-1|CAA68766.1| 410|Drosophila melanogaster protein ( Dros... 29 8.0
BT025227-1|ABF17918.1| 418|Drosophila melanogaster FI01011p pro... 29 8.0
AY119136-1|AAM50996.1| 418|Drosophila melanogaster RE37758p pro... 29 8.0
AE014134-1019|AAF52323.2| 418|Drosophila melanogaster CG11607-P... 29 8.0
>BT021372-1|AAX33520.1| 2286|Drosophila melanogaster LP05745p protein.
Length = 2286
Score = 38.7 bits (86), Expect = 0.008
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = -2
Query: 582 ALDLDDWRGRCSCMPHPLLAALRQGL 505
ALDLDD+RG C C HPLL L Q L
Sbjct: 2249 ALDLDDFRGLCGCGKHPLLRTLSQEL 2274
Score = 35.1 bits (77), Expect = 0.092
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -2
Query: 615 RVVASGARRCGALDLDDWRGRCSCMPHPLLAALRQGLTDP 496
R + G ALDLDD++ RC HPLL + L DP
Sbjct: 1295 RSLKLGGGMVWALDLDDFKNRCGNGVHPLLTEIHNVLKDP 1334
Score = 32.7 bits (71), Expect = 0.49
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 615 RVVASGARRCGALDLDDWRGRCSCMPHPLLAALRQGL 505
+ + G ALDLDD++ C C +PLL A+ + L
Sbjct: 1738 KAMGLGGAMIWALDLDDFKNVCECESYPLLKAINRVL 1774
>AY119021-1|AAM50881.1| 688|Drosophila melanogaster LP04696p
protein.
Length = 688
Score = 38.7 bits (86), Expect = 0.008
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = -2
Query: 582 ALDLDDWRGRCSCMPHPLLAALRQGL 505
ALDLDD+RG C C HPLL L Q L
Sbjct: 651 ALDLDDFRGLCGCGKHPLLRTLSQEL 676
Score = 32.7 bits (71), Expect = 0.49
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 615 RVVASGARRCGALDLDDWRGRCSCMPHPLLAALRQGL 505
+ + G ALDLDD++ C C +PLL A+ + L
Sbjct: 140 KAMGLGGAMIWALDLDDFKNVCECESYPLLKAINRVL 176
>AE014134-3630|EAA46011.1| 2286|Drosophila melanogaster CG18140-PA
protein.
Length = 2286
Score = 38.7 bits (86), Expect = 0.008
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = -2
Query: 582 ALDLDDWRGRCSCMPHPLLAALRQGL 505
ALDLDD+RG C C HPLL L Q L
Sbjct: 2249 ALDLDDFRGLCGCGKHPLLRTLSQEL 2274
Score = 35.1 bits (77), Expect = 0.092
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -2
Query: 615 RVVASGARRCGALDLDDWRGRCSCMPHPLLAALRQGLTDP 496
R + G ALDLDD++ RC HPLL + L DP
Sbjct: 1295 RSLKLGGGMVWALDLDDFKNRCGNGVHPLLTEIHNVLKDP 1334
Score = 32.7 bits (71), Expect = 0.49
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 615 RVVASGARRCGALDLDDWRGRCSCMPHPLLAALRQGL 505
+ + G ALDLDD++ C C +PLL A+ + L
Sbjct: 1738 KAMGLGGAMIWALDLDDFKNVCECESYPLLKAINRVL 1774
>AY051988-1|AAK93412.1| 1013|Drosophila melanogaster LD45559p
protein.
Length = 1013
Score = 33.1 bits (72), Expect = 0.37
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -2
Query: 582 ALDLDDWRGRCSCMPHPLLAALRQGLTDPTIPL 484
++D+DD+ GRC +PLL AL L D + L
Sbjct: 894 SIDMDDFSGRCGSGKYPLLTALNDELKDYKVEL 926
>AE014296-558|AAF47714.2| 983|Drosophila melanogaster CG1869-PA
protein.
Length = 983
Score = 33.1 bits (72), Expect = 0.37
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -2
Query: 582 ALDLDDWRGRCSCMPHPLLAALRQGLTDPTIPL 484
++D+DD+ GRC +PLL AL L D + L
Sbjct: 894 SIDMDDFSGRCGSGKYPLLTALNDELKDYKVEL 926
>AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA
protein.
Length = 4498
Score = 32.3 bits (70), Expect = 0.65
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = -2
Query: 582 ALDLDDWRGRCSCMPHPLLAALRQGLTD 499
A+D DD+RG C+ P+PL+ A ++ + +
Sbjct: 401 AIDNDDFRGTCNGKPYPLIEAAKEAMVE 428
>AE014134-2186|ABI31310.1| 893|Drosophila melanogaster CG31761-PE,
isoform E protein.
Length = 893
Score = 30.7 bits (66), Expect = 2.0
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +1
Query: 532 RVRHAGAPPAPVVQIESPTAPCPGGHHATPTFPLGGTFSTLKYEA 666
R+ +A APP P + + P GH ATPT P GG+ +L + A
Sbjct: 713 RLTYAAAPPPPPIST-TYNMPQLIGHTATPTQP-GGSSQSLTFNA 755
>AY069683-1|AAL39828.1| 993|Drosophila melanogaster LD45449p
protein.
Length = 993
Score = 29.5 bits (63), Expect = 4.6
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 535 VRHAGAPPAPVVQIESPTAPCPGGHHATPTFPLGGTF 645
+ H+G PP P P P P G++ P P G +
Sbjct: 430 IGHSGPPPPPPSGNYGPPPPPPSGNYGPPPPPPSGNY 466
>AE014298-2035|AAF48374.1| 993|Drosophila melanogaster CG9411-PA
protein.
Length = 993
Score = 29.5 bits (63), Expect = 4.6
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 535 VRHAGAPPAPVVQIESPTAPCPGGHHATPTFPLGGTF 645
+ H+G PP P P P P G++ P P G +
Sbjct: 430 IGHSGPPPPPPSGNYGPPPPPPSGNYGPPPPPPSGNY 466
>AY075429-1|AAL68245.1| 1384|Drosophila melanogaster LD47780p
protein.
Length = 1384
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 635 PSGNVGVAWWPPGHGAVGLSIWTTGA 558
PS N+G W GA S+WT GA
Sbjct: 76 PSSNLGGTWGEDDDGADSSSVWTGGA 101
>AE014135-123|AAX52511.1| 1384|Drosophila melanogaster CG31992-PH,
isoform H protein.
Length = 1384
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 635 PSGNVGVAWWPPGHGAVGLSIWTTGA 558
PS N+G W GA S+WT GA
Sbjct: 76 PSSNLGGTWGEDDDGADSSSVWTGGA 101
>AE014135-122|AAX52510.1| 1384|Drosophila melanogaster CG31992-PG,
isoform G protein.
Length = 1384
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 635 PSGNVGVAWWPPGHGAVGLSIWTTGA 558
PS N+G W GA S+WT GA
Sbjct: 76 PSSNLGGTWGEDDDGADSSSVWTGGA 101
>AE014135-121|AAN06509.1| 1384|Drosophila melanogaster CG31992-PF,
isoform F protein.
Length = 1384
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 635 PSGNVGVAWWPPGHGAVGLSIWTTGA 558
PS N+G W GA S+WT GA
Sbjct: 76 PSSNLGGTWGEDDDGADSSSVWTGGA 101
>AE014135-120|AAN06508.1| 1384|Drosophila melanogaster CG31992-PE,
isoform E protein.
Length = 1384
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 635 PSGNVGVAWWPPGHGAVGLSIWTTGA 558
PS N+G W GA S+WT GA
Sbjct: 76 PSSNLGGTWGEDDDGADSSSVWTGGA 101
>AE014135-119|AAN06507.1| 1384|Drosophila melanogaster CG31992-PD,
isoform D protein.
Length = 1384
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 635 PSGNVGVAWWPPGHGAVGLSIWTTGA 558
PS N+G W GA S+WT GA
Sbjct: 76 PSSNLGGTWGEDDDGADSSSVWTGGA 101
>AE014135-118|AAF59324.2| 1384|Drosophila melanogaster CG31992-PC,
isoform C protein.
Length = 1384
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 635 PSGNVGVAWWPPGHGAVGLSIWTTGA 558
PS N+G W GA S+WT GA
Sbjct: 76 PSSNLGGTWGEDDDGADSSSVWTGGA 101
>AE014135-117|AAF59322.2| 1384|Drosophila melanogaster CG31992-PB,
isoform B protein.
Length = 1384
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 635 PSGNVGVAWWPPGHGAVGLSIWTTGA 558
PS N+G W GA S+WT GA
Sbjct: 76 PSSNLGGTWGEDDDGADSSSVWTGGA 101
>AE014135-116|AAF59323.2| 1384|Drosophila melanogaster CG31992-PA,
isoform A protein.
Length = 1384
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 635 PSGNVGVAWWPPGHGAVGLSIWTTGA 558
PS N+G W GA S+WT GA
Sbjct: 76 PSSNLGGTWGEDDDGADSSSVWTGGA 101
>Y00843-1|CAA68766.1| 410|Drosophila melanogaster protein (
Drosophila melanogasterH2.0 homeobox gene. ).
Length = 410
Score = 28.7 bits (61), Expect = 8.0
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +1
Query: 556 PAPVVQIESPTAPCP--GGHHATPTFPLGGTFSTLKYEAH 669
P P + +S P P HA PT+P T + L++ H
Sbjct: 143 PGPYMDYKSVLRPTPIRAAEHAAPTYPTLATNALLRFHQH 182
>BT025227-1|ABF17918.1| 418|Drosophila melanogaster FI01011p
protein.
Length = 418
Score = 28.7 bits (61), Expect = 8.0
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +1
Query: 556 PAPVVQIESPTAPCP--GGHHATPTFPLGGTFSTLKYEAH 669
P P + +S P P HA PT+P T + L++ H
Sbjct: 152 PGPYMDYKSVLRPTPIRAAEHAAPTYPTLATNALLRFHQH 191
>AY119136-1|AAM50996.1| 418|Drosophila melanogaster RE37758p
protein.
Length = 418
Score = 28.7 bits (61), Expect = 8.0
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +1
Query: 556 PAPVVQIESPTAPCP--GGHHATPTFPLGGTFSTLKYEAH 669
P P + +S P P HA PT+P T + L++ H
Sbjct: 152 PGPYMDYKSVLRPTPIRAAEHAAPTYPTLATNALLRFHQH 191
>AE014134-1019|AAF52323.2| 418|Drosophila melanogaster CG11607-PA
protein.
Length = 418
Score = 28.7 bits (61), Expect = 8.0
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +1
Query: 556 PAPVVQIESPTAPCP--GGHHATPTFPLGGTFSTLKYEAH 669
P P + +S P P HA PT+P T + L++ H
Sbjct: 152 PGPYMDYKSVLRPTPIRAAEHAAPTYPTLATNALLRFHQH 191
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,774,793
Number of Sequences: 53049
Number of extensions: 635413
Number of successful extensions: 1891
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1891
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -