BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= cesb0066 (678 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 26 1.3 AF457558-1|AAL68788.1| 56|Anopheles gambiae hypothetical prote... 23 6.7 AY578796-1|AAT07301.1| 437|Anopheles gambiae Gbb-60A protein. 23 8.9 >AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. Length = 1133 Score = 25.8 bits (54), Expect = 1.3 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = -1 Query: 321 LECSAGCSEKCSNFKLL*KNGE 256 L C+AG + +CS+ K L K+GE Sbjct: 131 LGCNAGQTNRCSSLKDLIKHGE 152 >AF457558-1|AAL68788.1| 56|Anopheles gambiae hypothetical protein 11 protein. Length = 56 Score = 23.4 bits (48), Expect = 6.7 Identities = 9/12 (75%), Positives = 9/12 (75%) Frame = -2 Query: 233 LVLFACLFFIHT 198 LVL CLFF HT Sbjct: 12 LVLLICLFFYHT 23 >AY578796-1|AAT07301.1| 437|Anopheles gambiae Gbb-60A protein. Length = 437 Score = 23.0 bits (47), Expect = 8.9 Identities = 8/15 (53%), Positives = 12/15 (80%) Frame = +1 Query: 199 VWIKNKQANNTRRIG 243 +W+KN+QAN+ IG Sbjct: 239 LWLKNRQANHGLYIG 253 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 691,113 Number of Sequences: 2352 Number of extensions: 14311 Number of successful extensions: 14 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 14 length of database: 563,979 effective HSP length: 62 effective length of database: 418,155 effective search space used: 68159265 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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