Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0066
         (678 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030436-1|ABO52856.1|  703|Drosophila melanogaster IP18437p pro...    29   5.8  
AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1 pr...    29   5.8  
AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB ...    29   5.8  

>BT030436-1|ABO52856.1|  703|Drosophila melanogaster IP18437p
           protein.
          Length = 703

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = +3

Query: 477 REYNIVIKDM-SIMAKLNWQPTT*DQSTTKMLF 572
           R++N  ++++ SI A L WQP   D + T++LF
Sbjct: 378 RDFNFPLQNLVSICALLVWQPANPDDTITRILF 410


>AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1
           protein.
          Length = 5327

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = +3

Query: 477 REYNIVIKDM-SIMAKLNWQPTT*DQSTTKMLF 572
           R++N  ++++ SI A L WQP   D + T++LF
Sbjct: 387 RDFNFPLQNLVSICALLVWQPANPDDTITRILF 419


>AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB
           protein.
          Length = 5412

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = +3

Query: 477 REYNIVIKDM-SIMAKLNWQPTT*DQSTTKMLF 572
           R++N  ++++ SI A L WQP   D + T++LF
Sbjct: 432 RDFNFPLQNLVSICALLVWQPANPDDTITRILF 464


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,364,571
Number of Sequences: 53049
Number of extensions: 563155
Number of successful extensions: 1148
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)