Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0065
         (403 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   3.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.0  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   6.0  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   6.0  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    20   7.9  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    20   7.9  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -2

Query: 156 FVAQSLNKFLVCG 118
           F+ +  NKF++CG
Sbjct: 317 FLQEGANKFVICG 329


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 273 DNTGAADNFPCLAILVNLAETSPFSKLFVVV 181
           + +G+  N  CL I V + +   +   FV+V
Sbjct: 52  EESGSMANQKCLEITVKILKIVAYLVTFVIV 82


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 273 DNTGAADNFPCLAILVNLAETSPFSKLFVVV 181
           + +G+  N  CL I V + +   +   FV+V
Sbjct: 52  EESGSMANQKCLEITVKILKIVAYLVTFVIV 82


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 273 DNTGAADNFPCLAILVNLAETSPFSKLFVVV 181
           + +G+  N  CL I V + +   +   FV+V
Sbjct: 52  EESGSMANQKCLEITVKILKIVAYLVTFVIV 82


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 273 DNTGAADNFPCLAILVNLAETSPFSKLFVVV 181
           + +G+  N  CL I V + +   +   FV+V
Sbjct: 52  EESGSMANQKCLEITVKILKIVAYLVTFVIV 82


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 11/38 (28%), Positives = 15/38 (39%)
 Frame = -1

Query: 115 HHSSQPKHIVLLASCQEL*RLREDRAQDHHGLKLSLAP 2
           HHS  P H V  A+  E           + G +L  +P
Sbjct: 52  HHSHMPPHSVFAANNAEFPEFVHSGMVHNDGTQLMPSP 89


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 11/38 (28%), Positives = 15/38 (39%)
 Frame = -1

Query: 115 HHSSQPKHIVLLASCQEL*RLREDRAQDHHGLKLSLAP 2
           HHS  P H V  A+  E           + G +L  +P
Sbjct: 52  HHSHMPPHSVFAANNAEFPEFVHSGMVHNDGTQLMPSP 89


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 20.2 bits (40), Expect = 7.9
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -2

Query: 249 FPCLAILVNLAETSPFSKLFVVVNLDQ 169
           F  +AI  +LAE S ++  +  V+LD+
Sbjct: 9   FFVIAIASSLAENSKYTTKYDNVDLDE 35


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 7.9
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +1

Query: 286 GEETPALDVLKDYLKXXXXXLGVML 360
           G +    D+  DYL      LGV L
Sbjct: 22  GSKKTVFDIPNDYLNDKYKPLGVSL 46


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,696
Number of Sequences: 336
Number of extensions: 1672
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8646818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)