Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0065
(403 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0875 - 7265529-7265588,7265681-7265746,7266008-7266293,726... 155 2e-38
07_01_0360 + 2646279-2646283,2647113-2647398,2648043-2648108,264... 153 4e-38
06_01_1127 + 9294079-9294193,9294300-9294369,9294611-9294716,929... 33 0.085
02_05_0610 - 30342105-30342266,30343024-30343129,30343788-303438... 31 0.34
09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894... 29 1.0
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892... 29 1.4
12_01_1092 - 11362094-11362367,11362739-11362795,11363256-113636... 28 2.4
05_04_0167 + 18668004-18668287,18668961-18669043,18669346-186694... 28 2.4
12_01_0222 - 1675077-1675289,1675476-1675553,1675943-1676002,167... 28 3.2
11_01_0221 - 1720952-1721164,1721351-1721428,1721836-1721895,172... 28 3.2
06_03_0493 + 21402536-21404599 28 3.2
08_02_0101 + 12374476-12376683 27 4.2
04_04_0965 - 29762388-29762564,29764272-29766361,29766567-297671... 27 4.2
11_06_0013 - 19252779-19252805,19252947-19253090,19253572-192536... 27 5.6
11_03_0180 - 11294527-11294823,11295847-11295852 27 7.3
09_02_0084 + 4106803-4106851,4108165-4108460 27 7.3
06_03_0194 + 17775189-17775482,17775793-17775844,17775934-177759... 27 7.3
05_03_0074 + 8095355-8096575,8096664-8096901,8096990-8097667,809... 27 7.3
04_03_0183 + 12352147-12352179,12352390-12353349,12353815-123539... 27 7.3
09_02_0042 - 3402424-3402534,3403242-3403345,3403448-3403562,340... 26 9.7
04_04_0753 - 27797298-27797547,27797765-27797951,27798040-277981... 26 9.7
04_01_0511 + 6678765-6678801,6678904-6679923,6680012-6680718 26 9.7
02_05_1037 + 33682048-33682188,33682317-33682358,33683143-336833... 26 9.7
>07_01_0875 -
7265529-7265588,7265681-7265746,7266008-7266293,
7267138-7267142
Length = 138
Score = 155 bits (375), Expect = 2e-38
Identities = 69/109 (63%), Positives = 87/109 (79%)
Frame = +1
Query: 4 VLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVD 183
V+K + H GLV GL EAAKA++K A LCVLAE+CD+ Y KLV+ALC EH + LV V
Sbjct: 28 VMKKSSAHDGLVKGLREAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVP 87
Query: 184 NNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 330
+ K LGEWAGLCKID +GKARK+VGCSCVV+KDFGEE+ L++++DY+K
Sbjct: 88 SAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDFGEESEGLNIVQDYVK 136
>07_01_0360 +
2646279-2646283,2647113-2647398,2648043-2648108,
2648199-2648258
Length = 138
Score = 153 bits (372), Expect = 4e-38
Identities = 68/109 (62%), Positives = 87/109 (79%)
Frame = +1
Query: 4 VLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVD 183
V+K + H GLV GL EAAKA++K A LCVLAE+CD+ Y KLV+ALC EH + LV V
Sbjct: 28 VMKKSSAHDGLVKGLREAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVP 87
Query: 184 NNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 330
+ K LGEWAGLCKID +GKARK+VGCSCVV+KD+GEE+ L++++DY+K
Sbjct: 88 SAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDYGEESEGLNIVQDYVK 136
>06_01_1127 +
9294079-9294193,9294300-9294369,9294611-9294716,
9295665-9295805,9296377-9296475
Length = 176
Score = 33.1 bits (72), Expect = 0.085
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +1
Query: 34 LVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAG 213
L G+ E K++ + Q LC++A N V LC E IP V V + + L AG
Sbjct: 45 LKRGVKEVVKSIRRGQKGLCIIAGNISPIDVITHVPILCEEANIPYVYVPSKEDLAT-AG 103
Query: 214 LCK 222
K
Sbjct: 104 TTK 106
>02_05_0610 -
30342105-30342266,30343024-30343129,30343788-30343857,
30343978-30344092
Length = 150
Score = 31.1 bits (67), Expect = 0.34
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +1
Query: 34 LVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAG 213
L G+ E K++ + LCV+A N V LC E IP + V + + L AG
Sbjct: 45 LKRGVKEVVKSIRRGNKGLCVIAGNISPIDVITHVPILCEEANIPYIYVPSKEDLAT-AG 103
Query: 214 LCK 222
K
Sbjct: 104 TTK 106
>09_04_0677 -
19388888-19389019,19389124-19389216,19389317-19389445,
19389559-19389728,19390280-19390481,19390576-19390623,
19390797-19390799
Length = 258
Score = 29.5 bits (63), Expect = 1.0
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +1
Query: 40 HGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 201
+GL+ +++ +A L V+A + D + ALC + ++P V +LG
Sbjct: 130 YGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKARLG 183
>01_07_0018 -
40488702-40488833,40488928-40489020,40489125-40489253,
40489379-40489500,40490292-40490544,40490636-40490638
Length = 243
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +1
Query: 40 HGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 201
+GL +++ +A L V+A + D + ALC + +IP V +LG
Sbjct: 115 YGLDHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLG 168
>12_01_1092 -
11362094-11362367,11362739-11362795,11363256-11363683,
11364350-11365462
Length = 623
Score = 28.3 bits (60), Expect = 2.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 100 AENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 201
A CDE +K + +CN + L + D+N +G
Sbjct: 316 AFKCDEYTVRKCSKVICNRSKNSLYRFDSNASIG 349
>05_04_0167 +
18668004-18668287,18668961-18669043,18669346-18669434,
18670085-18670158,18670234-18670284,18671486-18671553,
18671666-18672234,18672333-18672383
Length = 422
Score = 28.3 bits (60), Expect = 2.4
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -1
Query: 169 VESDVRCTEPEQVSCMRLHHSSQPKHIVLLA 77
+ES ++ TEP + + LH +S+P +VL A
Sbjct: 268 IESSMQRTEPYKFPSLGLHSNSKPSSVVLSA 298
>12_01_0222 - 1675077-1675289,1675476-1675553,1675943-1676002,
1676103-1676206,1676321-1676479,1676768-1676894,
1677569-1677736,1677890-1678000,1678090-1678243,
1678409-1678744,1678854-1679038,1679141-1679239,
1679376-1679639,1679776-1679952,1680351-1680644,
1680753-1680920,1681574-1681918,1682002-1682171,
1682272-1682422,1683296-1683365,1683456-1683640,
1683999-1684092,1684195-1684313,1684658-1684717,
1684844-1684930,1685631-1685717,1685905-1686013,
1686105-1686183,1686350-1686437,1686611-1686675,
1687570-1687722,1688514-1688620,1688702-1688784,
1688926-1689016,1689095-1689231,1689612-1689701,
1689795-1689962,1690366-1690560
Length = 1809
Score = 27.9 bits (59), Expect = 3.2
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 166 PLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEET 297
PLV K GE A LC+ +K +A+ + ++KDF + T
Sbjct: 1759 PLVDRKGPKFSGELAELCESEKSEQAKAFLKQCMDILKDFEDPT 1802
>11_01_0221 - 1720952-1721164,1721351-1721428,1721836-1721895,
1721996-1722099,1722214-1722372,1722668-1722794,
1723469-1723636,1723789-1723899,1723989-1724142,
1724308-1724643,1724753-1724937,1725040-1725138,
1725275-1725538,1725674-1725850,1726249-1726542,
1726649-1726816,1727473-1727817,1727901-1728070,
1728171-1728321,1729193-1729262,1729353-1729537,
1729896-1729989,1730094-1730212,1730558-1730617,
1730744-1730830,1732348-1732434,1732622-1732730,
1732822-1732900,1733067-1733154,1733328-1733392,
1734287-1734439,1735231-1735337,1735419-1735501,
1735643-1735733,1735812-1735948,1736118-1736207,
1736301-1736468,1736875-1737057
Length = 1805
Score = 27.9 bits (59), Expect = 3.2
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 166 PLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEET 297
PLV K GE A LC+ +K +A+ + ++KDF + T
Sbjct: 1755 PLVDRKGPKFSGELAELCESEKSEQAKAFLKQCMDILKDFEDAT 1798
>06_03_0493 + 21402536-21404599
Length = 687
Score = 27.9 bits (59), Expect = 3.2
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +1
Query: 1 EVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVK 177
E+L T LIHG ++ E A L + D + Y L+Q LCN H++ K
Sbjct: 398 ELLYTTLIHGHFMNKNSEKALGLLSEMKNKGL---ELDISLYGALIQGLCNVHKLDEAK 453
>08_02_0101 + 12374476-12376683
Length = 735
Score = 27.5 bits (58), Expect = 4.2
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 7 LKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENC--DEAAYKKLVQALC 150
L+TA + L+HGL A + + + A++C D Y +V LC
Sbjct: 139 LRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLC 188
>04_04_0965 - 29762388-29762564,29764272-29766361,29766567-29767170,
29768395-29768637,29768704-29770203
Length = 1537
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/18 (72%), Positives = 14/18 (77%), Gaps = 1/18 (5%)
Frame = -1
Query: 262 SSRQFS-LPCHPCQSCRD 212
SSR+FS LPC PC S RD
Sbjct: 1207 SSREFSVLPCQPCCSERD 1224
>11_06_0013 -
19252779-19252805,19252947-19253090,19253572-19253663,
19253757-19253835,19253965-19254031,19254163-19254254,
19254986-19255102,19255254-19255365,19255479-19255594,
19255680-19255756,19255912-19255993,19256077-19256214,
19258806-19259009
Length = 448
Score = 27.1 bits (57), Expect = 5.6
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +1
Query: 19 LIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKL 198
++ GG HG+HE +D R+ L + + A LV ALC +I L +V + +
Sbjct: 139 ILQGGFFHGIHELTYGVDIRKIRLMGVLQ---RIAIAYLVVALC---EIWLRRVSSGGNI 192
Query: 199 G 201
G
Sbjct: 193 G 193
>11_03_0180 - 11294527-11294823,11295847-11295852
Length = 100
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 124 MRLHHSSQPKHIVLLASCQEL*RLREDRAQ 35
+RLHH S I +LA C++ L+E+R +
Sbjct: 3 VRLHHWSDEDCIKILAQCKKAVPLQEERGK 32
>09_02_0084 + 4106803-4106851,4108165-4108460
Length = 114
Score = 26.6 bits (56), Expect = 7.3
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +1
Query: 16 ALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNN 189
A+ GL +A + DK Q L +N EAA K QAL + +K +N
Sbjct: 53 AIFQNGLGSSFDDAVELFDKLQCALDKYYKNIAEAATKWASQALAMTKTLNQLKFCSN 110
>06_03_0194 +
17775189-17775482,17775793-17775844,17775934-17775959,
17776525-17776869,17777231-17777287
Length = 257
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/50 (24%), Positives = 22/50 (44%)
Frame = +2
Query: 77 GKQYYVFWLRTVMKPHTRNLFRLCATNIRFHWSRLTTTKSLENGLVSARL 226
G +++ RT +KPH L+ ++ W+ + + E ARL
Sbjct: 92 GHLHFLHMERTKLKPHRCELYASLGPQLQMGWTNIQLCQVAERDAAIARL 141
>05_03_0074 +
8095355-8096575,8096664-8096901,8096990-8097667,
8097787-8097974
Length = 774
Score = 26.6 bits (56), Expect = 7.3
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 55 AAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKK 195
A L+ +A L VL E+C + V + C +H++ +V +D K
Sbjct: 570 AMDLLEFTKAELDVLREDCGWKEFLGKVTSFCVKHKVKVVDMDGKYK 616
>04_03_0183 +
12352147-12352179,12352390-12353349,12353815-12353998,
12354087-12354799
Length = 629
Score = 26.6 bits (56), Expect = 7.3
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 55 AAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKK 195
A L+ +A L VL E+C + V + C +H++ +V +D K
Sbjct: 475 AMDLLEFTKAELDVLREDCGWKEFLGKVTSFCVKHKVKVVDMDGKYK 521
>09_02_0042 -
3402424-3402534,3403242-3403345,3403448-3403562,
3404344-3404391,3404519-3404608,3404819-3404893,
3405001-3405153,3405695-3405779,3408051-3408121,
3408243-3408293,3409037-3409453,3409529-3409660,
3409779-3409892,3411113-3411179,3411264-3411397,
3411486-3411701,3412627-3413418
Length = 924
Score = 26.2 bits (55), Expect = 9.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2
Query: 264 GAADNFPCLAILVNLAE 214
GA D F CLA+ +NL E
Sbjct: 590 GAEDPFQCLAVCINLTE 606
>04_04_0753 -
27797298-27797547,27797765-27797951,27798040-27798113,
27798719-27798949,27799047-27799133,27799244-27799434
Length = 339
Score = 26.2 bits (55), Expect = 9.7
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 28 GGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKK 132
GGL+ G+ AAKA++ +L + D++A K
Sbjct: 196 GGLISGVALAAKAINPSIRILAAEPKGADDSAQSK 230
>04_01_0511 + 6678765-6678801,6678904-6679923,6680012-6680718
Length = 587
Score = 26.2 bits (55), Expect = 9.7
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 55 AAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKK 195
A L+ +A L VL E+C + V + C +H++ +V +D K
Sbjct: 436 AMDLLEFTKAELDVLREDCGCKEFLGKVTSFCVKHKVKVVDMDGKYK 482
>02_05_1037 +
33682048-33682188,33682317-33682358,33683143-33683328,
33684442-33684657,33684803-33684949,33685525-33685866,
33687257-33687361
Length = 392
Score = 26.2 bits (55), Expect = 9.7
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 139 QALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCV 270
QA N ++ P VK D+N W + + K GK I SCV
Sbjct: 137 QASINVYE-PKVKQDSNDLSASWIQIGSVPKVGKGVGIGAGSCV 179
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,032,434
Number of Sequences: 37544
Number of extensions: 190858
Number of successful extensions: 652
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 652
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 694697784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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