Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0064
         (834 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q17L57 Cluster: Putative uncharacterized protein; n=1; ...    36   1.3  
UniRef50_Q2NFN5 Cluster: Member of asn/thr-rich large protein fa...    33   6.7  

>UniRef50_Q17L57 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 559

 Score = 35.9 bits (79), Expect = 1.3
 Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
 Frame = -2

Query: 398 EISLQIELQNI-VKSILNVCEHCFRFSIIVIKHIVTV-SIF 282
           EI LQ+ L  I + ++LN+CE CF +S I  K++ TV SIF
Sbjct: 411 EIQLQLRLSQIHLSALLNLCEACFIYSDIPSKYLETVRSIF 451


>UniRef50_Q2NFN5 Cluster: Member of asn/thr-rich large protein
           family; n=1; Methanosphaera stadtmanae DSM 3091|Rep:
           Member of asn/thr-rich large protein family -
           Methanosphaera stadtmanae (strain DSM 3091)
          Length = 1063

 Score = 33.5 bits (73), Expect = 6.7
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +3

Query: 525 TYLMENVISTNIYFKNTLIFLSKNDNTIIKANTY 626
           TY++EN+   NI +   LI LS N NT +K +T+
Sbjct: 402 TYIIENIFKNNIIYDKALI-LSSNINTTVKYSTF 434


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 700,908,548
Number of Sequences: 1657284
Number of extensions: 13282825
Number of successful extensions: 24574
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 23385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24560
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72553824147
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)