Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0063
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    24   0.94 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   1.6  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   3.8  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   5.0  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   6.6  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   6.6  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   6.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.6  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   6.6  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   6.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   6.6  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   6.6  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   6.6  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   8.7  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -1

Query: 489 QKLSTVDSLCYPRIQSLSHRLW*EHQKACHHL 394
           ++LS + + C+P   S  H+    H    HHL
Sbjct: 325 EELSAMVNRCHPLSLSSDHQAMLHHNPMSHHL 356


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 210 IMSLHHSKHHATYINNLNVAEEKLAQ 287
           I+S  H K    ++NN+   +E LA+
Sbjct: 99  IISFMHKKSFKNFVNNVAALDETLAK 124


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 480 STVDSLCYPRIQSLSHRLW 424
           S+V+S  +PR  + + RLW
Sbjct: 531 SSVESRVWPRAAAAAERLW 549


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = +3

Query: 234 HHATYINNLNVAEEKLAQAQAKGDIDTIINLAPALKFNGGGHINHSI 374
           H    + N  + +E +  +     I+T  +   +  FNGGG I  +I
Sbjct: 5   HLEQTLENAGMPDESINISDVIEVIETDPDFHESTMFNGGGEIPQNI 51


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 551 NSYVPEPGSSAGHHWI 598
           NSY+P  G   G+H I
Sbjct: 40  NSYIPPGGDFFGNHHI 55


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 551 NSYVPEPGSSAGHHWI 598
           NSY+P  G   G+H I
Sbjct: 40  NSYIPPGGDFFGNHHI 55


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 577 GSWFWHVAISNFFIC 533
           G W W + IS  +IC
Sbjct: 131 GIWVWLINISATYIC 145


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 577 GSWFWHVAISNFFIC 533
           G W W + IS  +IC
Sbjct: 364 GIWVWLINISATYIC 378


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 577 GSWFWHVAISNFFIC 533
           G W W + IS  +IC
Sbjct: 364 GIWVWLINISATYIC 378


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 520 SQPQPEPCTATEAVDS 473
           SQP PEP    +A D+
Sbjct: 134 SQPNPEPADFADAPDA 149


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 520 SQPQPEPCTATEAVDS 473
           SQP PEP    +A D+
Sbjct: 134 SQPNPEPADFADAPDA 149


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 608 ERDQSSGGLQRILVLARSY 552
           E+D   GGLQ I VL  S+
Sbjct: 214 EQDTGLGGLQNIKVLDLSF 232


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 551 NSYVPEPGSSAGHHWI 598
           NSY+P  G   G+H I
Sbjct: 40  NSYIPPGGDFFGNHHI 55


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 551 NSYVPEPGSSAGHHWI 598
           NSY+P  G   G+H I
Sbjct: 40  NSYIPPGGDFFGNHHI 55


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 113 IIDSSCRCFSPEAYF 157
           I+D+SCR F+   +F
Sbjct: 298 IVDASCRNFTAARFF 312


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,370
Number of Sequences: 336
Number of extensions: 3468
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)