Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0063
(648 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81057-6|CAB02913.1| 221|Caenorhabditis elegans Hypothetical pr... 260 5e-70
D85499-1|BAA12821.1| 221|Caenorhabditis elegans manganese super... 260 5e-70
D12984-1|BAA02363.1| 221|Caenorhabditis elegans manganese super... 260 5e-70
X85790-1|CAA59790.1| 218|Caenorhabditis elegans mangenese super... 247 6e-66
X77021-1|CAA54319.1| 218|Caenorhabditis elegans manganese super... 247 6e-66
U42844-5|AAB53822.1| 218|Caenorhabditis elegans Sod (superoxide... 247 6e-66
Z81545-2|CAB04438.1| 212|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical pr... 30 1.6
AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like... 29 2.1
AC006603-7|ABB51201.1| 576|Caenorhabditis elegans Hypothetical ... 28 5.0
AF106573-10|AAC78155.2| 862|Caenorhabditis elegans Gex interact... 28 6.6
Z74045-4|CAA98554.2| 924|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z74032-11|CAA98469.2| 924|Caenorhabditis elegans Hypothetical p... 27 8.7
>Z81057-6|CAB02913.1| 221|Caenorhabditis elegans Hypothetical
protein F10D11.1 protein.
Length = 221
Score = 260 bits (638), Expect = 5e-70
Identities = 121/187 (64%), Positives = 146/187 (78%)
Frame = +3
Query: 87 IMLMSQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNV 266
+ +S+ + + VA A R KH+LP+LPY+Y LEPVIS EIM LHH KHHATY+NNLN
Sbjct: 6 VRCVSKLVQPITGVA-AVRSKHSLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQ 64
Query: 267 AEEKLAQAQAKGDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAGEKDF 446
EEKL +A +KG++ I L PALKFNGGGHINHSIFW NL+ +GG+PS L A + DF
Sbjct: 65 IEEKLHEAVSKGNVKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSAELLTAIKSDF 124
Query: 447 GSWDNIKNQLSTASVAVQGSGWGWLGYNKQMKKLLIATCQNQDPLQATTGLVPLFGINVW 626
GS DN++ QLS ++VAVQGSGWGWLGY + K L +ATC NQDPL+ATTGLVPLFGI+VW
Sbjct: 125 GSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKILKVATCANQDPLEATTGLVPLFGIDVW 184
Query: 627 EHAYYLQ 647
EHAYYLQ
Sbjct: 185 EHAYYLQ 191
>D85499-1|BAA12821.1| 221|Caenorhabditis elegans manganese
superoxide dismutase protein.
Length = 221
Score = 260 bits (638), Expect = 5e-70
Identities = 121/187 (64%), Positives = 146/187 (78%)
Frame = +3
Query: 87 IMLMSQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNV 266
+ +S+ + + VA A R KH+LP+LPY+Y LEPVIS EIM LHH KHHATY+NNLN
Sbjct: 6 VRCVSKLVQPITGVA-AVRSKHSLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQ 64
Query: 267 AEEKLAQAQAKGDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAGEKDF 446
EEKL +A +KG++ I L PALKFNGGGHINHSIFW NL+ +GG+PS L A + DF
Sbjct: 65 IEEKLHEAVSKGNVKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSAELLTAIKSDF 124
Query: 447 GSWDNIKNQLSTASVAVQGSGWGWLGYNKQMKKLLIATCQNQDPLQATTGLVPLFGINVW 626
GS DN++ QLS ++VAVQGSGWGWLGY + K L +ATC NQDPL+ATTGLVPLFGI+VW
Sbjct: 125 GSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKILKVATCANQDPLEATTGLVPLFGIDVW 184
Query: 627 EHAYYLQ 647
EHAYYLQ
Sbjct: 185 EHAYYLQ 191
>D12984-1|BAA02363.1| 221|Caenorhabditis elegans manganese
superoxide dismutaseprecursor protein.
Length = 221
Score = 260 bits (638), Expect = 5e-70
Identities = 121/187 (64%), Positives = 146/187 (78%)
Frame = +3
Query: 87 IMLMSQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNV 266
+ +S+ + + VA A R KH+LP+LPY+Y LEPVIS EIM LHH KHHATY+NNLN
Sbjct: 6 VRCVSKLVQPITGVA-AVRSKHSLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQ 64
Query: 267 AEEKLAQAQAKGDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAGEKDF 446
EEKL +A +KG++ I L PALKFNGGGHINHSIFW NL+ +GG+PS L A + DF
Sbjct: 65 IEEKLHEAVSKGNVKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSAELLTAIKSDF 124
Query: 447 GSWDNIKNQLSTASVAVQGSGWGWLGYNKQMKKLLIATCQNQDPLQATTGLVPLFGINVW 626
GS DN++ QLS ++VAVQGSGWGWLGY + K L +ATC NQDPL+ATTGLVPLFGI+VW
Sbjct: 125 GSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKILKVATCANQDPLEATTGLVPLFGIDVW 184
Query: 627 EHAYYLQ 647
EHAYYLQ
Sbjct: 185 EHAYYLQ 191
>X85790-1|CAA59790.1| 218|Caenorhabditis elegans mangenese
superoxide dismutase protein.
Length = 218
Score = 247 bits (604), Expect = 6e-66
Identities = 116/176 (65%), Positives = 138/176 (78%), Gaps = 2/176 (1%)
Frame = +3
Query: 126 VAG--ASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK 299
VAG A R KHTLP+LP++Y LEPVIS EIM LHH KHHATY+NNLN EEKL +A +K
Sbjct: 16 VAGVLAVRSKHTLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSK 75
Query: 300 GDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAGEKDFGSWDNIKNQLS 479
G++ I L PALKFNGGGHINHSIFW NL+ +GG+PS L ++DFGS DN++ +LS
Sbjct: 76 GNLKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSKELMDTIKRDFGSLDNLQKRLS 135
Query: 480 TASVAVQGSGWGWLGYNKQMKKLLIATCQNQDPLQATTGLVPLFGINVWEHAYYLQ 647
++AVQGSGWGWLGY K+ K L IATC NQDPL+ G+VPLFGI+VWEHAYYLQ
Sbjct: 136 DITIAVQGSGWGWLGYCKKDKILKIATCANQDPLE---GMVPLFGIDVWEHAYYLQ 188
>X77021-1|CAA54319.1| 218|Caenorhabditis elegans manganese
superoxide dismutase protein.
Length = 218
Score = 247 bits (604), Expect = 6e-66
Identities = 116/176 (65%), Positives = 138/176 (78%), Gaps = 2/176 (1%)
Frame = +3
Query: 126 VAG--ASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK 299
VAG A R KHTLP+LP++Y LEPVIS EIM LHH KHHATY+NNLN EEKL +A +K
Sbjct: 16 VAGVLAVRSKHTLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSK 75
Query: 300 GDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAGEKDFGSWDNIKNQLS 479
G++ I L PALKFNGGGHINHSIFW NL+ +GG+PS L ++DFGS DN++ +LS
Sbjct: 76 GNLKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSKELMDTIKRDFGSLDNLQKRLS 135
Query: 480 TASVAVQGSGWGWLGYNKQMKKLLIATCQNQDPLQATTGLVPLFGINVWEHAYYLQ 647
++AVQGSGWGWLGY K+ K L IATC NQDPL+ G+VPLFGI+VWEHAYYLQ
Sbjct: 136 DITIAVQGSGWGWLGYCKKDKILKIATCANQDPLE---GMVPLFGIDVWEHAYYLQ 188
>U42844-5|AAB53822.1| 218|Caenorhabditis elegans Sod (superoxide
dismutase) protein3 protein.
Length = 218
Score = 247 bits (604), Expect = 6e-66
Identities = 116/176 (65%), Positives = 138/176 (78%), Gaps = 2/176 (1%)
Frame = +3
Query: 126 VAG--ASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK 299
VAG A R KHTLP+LP++Y LEPVIS EIM LHH KHHATY+NNLN EEKL +A +K
Sbjct: 16 VAGVLAVRSKHTLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSK 75
Query: 300 GDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAGEKDFGSWDNIKNQLS 479
G++ I L PALKFNGGGHINHSIFW NL+ +GG+PS L ++DFGS DN++ +LS
Sbjct: 76 GNLKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSKELMDTIKRDFGSLDNLQKRLS 135
Query: 480 TASVAVQGSGWGWLGYNKQMKKLLIATCQNQDPLQATTGLVPLFGINVWEHAYYLQ 647
++AVQGSGWGWLGY K+ K L IATC NQDPL+ G+VPLFGI+VWEHAYYLQ
Sbjct: 136 DITIAVQGSGWGWLGYCKKDKILKIATCANQDPLE---GMVPLFGIDVWEHAYYLQ 188
>Z81545-2|CAB04438.1| 212|Caenorhabditis elegans Hypothetical
protein F49H6.2 protein.
Length = 212
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +2
Query: 467 ESTVDSFCGSTGLRLGLAWLQQTNEEIANSYVPEPGSSAGHHWIGPALRNQCMGA 631
+ T DS C S G L Q+ + +ANS++ G+S+ WIG CM +
Sbjct: 90 QPTADSLCSSEGAVLSSIQSQEELDYMANSFIALNGASSA-FWIGAERTAACMSS 143
>Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical
protein ZK896.7 protein.
Length = 380
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 461 HKESTVDSFCGSTGLRLGLAWLQQTNEEIANSYVPEPGSSAGHHWIG 601
H +T +C S G L T+ +A+S E GS+ G WIG
Sbjct: 42 HTYNTAKEYCDSHGYSLATVDNAITSNFLASSAATEFGSNNGQFWIG 88
>Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +3
Query: 420 LTKAGEKDFGSWDNIKNQLSTASVAVQGSGWGWLGYNK 533
+T+ G++ FGS+ ++ +S G+G GW G ++
Sbjct: 115 MTRTGKRTFGSYGSVDTAKGQSSAHRAGTGSGWRGSSR 152
>Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +3
Query: 420 LTKAGEKDFGSWDNIKNQLSTASVAVQGSGWGWLGYNK 533
+T+ G++ FGS+ ++ +S G+G GW G ++
Sbjct: 115 MTRTGKRTFGSYGSVDTAKGQSSAHRAGTGSGWRGSSR 152
>AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like
protein FMI-1 protein.
Length = 2596
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -1
Query: 498 VLPQKLSTVDSLCYPRIQSLSHRLW*EHQKACHHLVTG 385
V+P + S VDS+C +S HR W +H+ CH G
Sbjct: 1733 VVPNRCS-VDSIC--PAESTCHRAWNKHKCKCHKSFVG 1767
>AC006603-7|ABB51201.1| 576|Caenorhabditis elegans Hypothetical
protein B0524.7 protein.
Length = 576
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 6/76 (7%)
Frame = +3
Query: 249 INNLNVAEEKLAQAQAKGDIDTIINLAPALKFNGGGHINHSIF---WH---NLSPNGGKP 410
+ N K A+ K + N + LK NG INH + W + NG P
Sbjct: 358 LRNAKQKAAKRARKLVKNWKKSAQNKSGVLKINGNHVINHDVVVKKWKVELKIEGNGESP 417
Query: 411 SDVLTKAGEKDFGSWD 458
V+ KA E G WD
Sbjct: 418 RKVVRKAKETS-GYWD 432
>AF106573-10|AAC78155.2| 862|Caenorhabditis elegans Gex interacting
protein protein 12 protein.
Length = 862
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -3
Query: 520 SQPQPEPCTATEAVDS*FFMLSQDPKSFSPALVRTSEGLPPF 395
S P P PC + + ++ +QDP S SP R SE L F
Sbjct: 658 SDPAPLPCESADRIEYPSQDCTQDPASTSPP-PRISESLTAF 698
>Z74045-4|CAA98554.2| 924|Caenorhabditis elegans Hypothetical
protein T27F2.2 protein.
Length = 924
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -2
Query: 227 VMKTHDFTANDRLQCIVLVRKLWQSMLLARSTG 129
++ HD++ N R+ C++ V + W +LL R +G
Sbjct: 556 LVDVHDYSTNQRISCVLGVAQDW-IVLLERPSG 587
>Z74032-11|CAA98469.2| 924|Caenorhabditis elegans Hypothetical
protein T27F2.2 protein.
Length = 924
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -2
Query: 227 VMKTHDFTANDRLQCIVLVRKLWQSMLLARSTG 129
++ HD++ N R+ C++ V + W +LL R +G
Sbjct: 556 LVDVHDYSTNQRISCVLGVAQDW-IVLLERPSG 587
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,182,354
Number of Sequences: 27780
Number of extensions: 331372
Number of successful extensions: 893
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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