Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0062
         (901 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   2.5  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   2.5  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         22   5.7  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   5.7  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   5.7  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   5.7  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 9/33 (27%), Positives = 21/33 (63%)
 Frame = -3

Query: 785 TNIRAIEESEPKRFVNVSPNSQRRQEGHARHFC 687
           +N+  ++E E K+  + S N+  ++EG++  +C
Sbjct: 445 SNVEVVQE-EAKKEESDSNNNNNKEEGNSCQYC 476


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 382 PLSTFLSKGLPVVISSDDPGAW 317
           P   FL K LP +    DP AW
Sbjct: 206 PSGGFLPKWLPPLQGFSDPSAW 227


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +1

Query: 721 WLFGDTLTKRFGSLSSMAR 777
           WLFGD L++R  +  ++ +
Sbjct: 155 WLFGDNLSERMKTTRALEK 173


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
 Frame = -1

Query: 901 VFRACMNSTELRSTLLYCKSIQEG--YTKVVKDYPDFI 794
           +F   +N  E      YC  +  G  Y K+   +P F+
Sbjct: 93  IFAKGLNVIEANRLFFYCSGLASGYLYLKLAMKWPRFM 130


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
 Frame = -1

Query: 901 VFRACMNSTELRSTLLYCKSIQEG--YTKVVKDYPDFI 794
           +F   +N  E      YC  +  G  Y K+   +P F+
Sbjct: 93  IFAKGLNVIEANRLFFYCSGLASGYLYLKLAMKWPRFM 130


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
 Frame = -1

Query: 901 VFRACMNSTELRSTLLYCKSIQEG--YTKVVKDYPDFI 794
           +F   +N  E      YC  +  G  Y K+   +P F+
Sbjct: 93  IFAKGLNVIEANRLFFYCSGLASGYLYLKLAMKWPRFM 130


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,455
Number of Sequences: 336
Number of extensions: 4260
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25030786
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)