Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0061
(652 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC127017-1|AAI27018.1| 1010|Homo sapiens KIAA0701 protein protein. 168 1e-41
BC014891-1|AAH14891.1| 522|Homo sapiens KIAA0701 protein protein. 168 1e-41
AL139100-5|CAI20353.1| 1440|Homo sapiens RP3-349A12.1 protein. 164 2e-40
AL033520-3|CAI20282.1| 1440|Homo sapiens RP3-349A12.1 protein. 164 2e-40
AK000309-1|BAA91074.1| 736|Homo sapiens protein ( Homo sapiens ... 164 2e-40
AB126777-1|BAD32740.1| 1440|Homo sapiens ICBP90 binding protein ... 164 2e-40
BX640641-1|CAE45788.1| 352|Homo sapiens hypothetical protein pr... 144 2e-34
AB014601-1|BAA31676.2| 1354|Homo sapiens KIAA0701 protein protein. 73 1e-12
BC132978-1|AAI32979.1| 412|Homo sapiens VPS13B protein protein. 32 1.5
BC132976-1|AAI32977.1| 412|Homo sapiens VPS13B protein protein. 32 1.5
AY223818-1|AAP41106.1| 412|Homo sapiens Cohen syndrome 1 protei... 32 1.5
AY223817-1|AAP41105.1| 863|Homo sapiens Cohen syndrome 1 protei... 32 1.5
AY223816-1|AAP41104.1| 1427|Homo sapiens Cohen syndrome 1 protei... 32 1.5
AY223815-1|AAP41103.1| 3997|Homo sapiens Cohen syndrome 1 protei... 32 1.5
AY223814-1|AAP41102.1| 4022|Homo sapiens Cohen syndrome 1 protei... 32 1.5
AK223122-1|BAD96842.1| 412|Homo sapiens Cohen syndrome 1 protei... 32 1.5
AK000590-1|BAA91275.1| 412|Homo sapiens protein ( Homo sapiens ... 32 1.5
AJ608773-1|CAE75585.1| 3997|Homo sapiens VPS13B-2A protein protein. 32 1.5
AJ608772-1|CAE75584.1| 4022|Homo sapiens VPS13B-1A protein protein. 32 1.5
U29538-1|AAC35421.1| 280|Homo sapiens FHL-1 protein. 31 2.7
CR456974-1|CAG33255.1| 280|Homo sapiens FHL1 protein. 31 2.7
BC088369-1|AAH88369.1| 296|Homo sapiens FHL1 protein protein. 31 2.7
BC010998-1|AAH10998.1| 280|Homo sapiens four and a half LIM dom... 31 2.7
AL078638-10|CAC18881.1| 280|Homo sapiens four and a half LIM do... 31 2.7
AL078638-9|CAI41061.1| 257|Homo sapiens four and a half LIM dom... 31 2.7
AL078638-8|CAI41062.1| 323|Homo sapiens four and a half LIM dom... 31 2.7
AL078638-7|CAI41060.1| 207|Homo sapiens four and a half LIM dom... 31 2.7
AL078638-6|CAI41059.1| 205|Homo sapiens four and a half LIM dom... 31 2.7
AL078638-5|CAI41058.1| 204|Homo sapiens four and a half LIM dom... 31 2.7
AL078638-2|CAI41055.1| 296|Homo sapiens four and a half LIM dom... 31 2.7
AK223299-1|BAD97019.1| 280|Homo sapiens four and a half LIM dom... 31 2.7
AF110763-1|AAD21579.1| 280|Homo sapiens skeletal muscle LIM-pro... 31 2.7
AF098518-1|AAC72390.1| 323|Homo sapiens four and a half LIM dom... 31 2.7
AF063002-1|AAC72886.1| 323|Homo sapiens LIM protein SLIMMER pro... 31 2.7
U60118-1|AAC50795.1| 150|Homo sapiens skeletal muscle LIM-prote... 31 3.6
U60115-1|AAC52021.1| 280|Homo sapiens skeletal muscle LIM-prote... 31 3.6
BC035760-1|AAH35760.1| 595|Homo sapiens ZNF440 protein protein. 31 3.6
AK095252-1|BAC04510.1| 595|Homo sapiens protein ( Homo sapiens ... 31 3.6
>BC127017-1|AAI27018.1| 1010|Homo sapiens KIAA0701 protein protein.
Length = 1010
Score = 168 bits (409), Expect = 1e-41
Identities = 86/194 (44%), Positives = 113/194 (58%), Gaps = 1/194 (0%)
Frame = +2
Query: 71 MVTIIKNQLLKHLSRFTKNLSPEQISLSALRGSGXXXXXXXXXXXXXXXXXXPGWLRLTS 250
M IIK Q+LKHLSRFTKNLSP++I+LS L+G G P WL +
Sbjct: 1 MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAINK 60
Query: 251 AKCNRASFRIQWTKLKTAPIVLNLDEVHIALEVCSEPRVMN-PSAAGALPVPGKYSYIHK 427
CN+AS RI WTKLKT PI L+LD+V + + C EPR N PS +Y + K
Sbjct: 61 VFCNKASIRIPWTKLKTHPICLSLDKVIMEMSTCEEPRSPNGPSPIATASGQSEYGFAEK 120
Query: 428 VIDGISVAVNHVQIDFNCDAFTSSVQISRVTVESRTPDGRKGDLRLTRIKCTDTGQLLIF 607
V++GISV+VN + I AF +S ++S++ + S GDLR TRI+ G++L F
Sbjct: 121 VVEGISVSVNSIVIRIGAKAFNASFELSQLRIYSVNAHWEHGDLRFTRIQDPQRGEVLTF 180
Query: 608 KELEWQSARIEAKA 649
KE+ WQ RIEA A
Sbjct: 181 KEINWQMIRIEADA 194
>BC014891-1|AAH14891.1| 522|Homo sapiens KIAA0701 protein protein.
Length = 522
Score = 168 bits (409), Expect = 1e-41
Identities = 86/194 (44%), Positives = 113/194 (58%), Gaps = 1/194 (0%)
Frame = +2
Query: 71 MVTIIKNQLLKHLSRFTKNLSPEQISLSALRGSGXXXXXXXXXXXXXXXXXXPGWLRLTS 250
M IIK Q+LKHLSRFTKNLSP++I+LS L+G G P WL +
Sbjct: 1 MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAINK 60
Query: 251 AKCNRASFRIQWTKLKTAPIVLNLDEVHIALEVCSEPRVMN-PSAAGALPVPGKYSYIHK 427
CN+AS RI WTKLKT PI L+LD+V + + C EPR N PS +Y + K
Sbjct: 61 VFCNKASIRIPWTKLKTHPICLSLDKVIMEMSTCEEPRSPNGPSPIATASGQSEYGFAEK 120
Query: 428 VIDGISVAVNHVQIDFNCDAFTSSVQISRVTVESRTPDGRKGDLRLTRIKCTDTGQLLIF 607
V++GISV+VN + I AF +S ++S++ + S GDLR TRI+ G++L F
Sbjct: 121 VVEGISVSVNSIVIRIGAKAFNASFELSQLRIYSVNAHWEHGDLRFTRIQDPQRGEVLTF 180
Query: 608 KELEWQSARIEAKA 649
KE+ WQ RIEA A
Sbjct: 181 KEINWQMIRIEADA 194
>AL139100-5|CAI20353.1| 1440|Homo sapiens RP3-349A12.1 protein.
Length = 1440
Score = 164 bits (399), Expect = 2e-40
Identities = 85/194 (43%), Positives = 117/194 (60%), Gaps = 1/194 (0%)
Frame = +2
Query: 71 MVTIIKNQLLKHLSRFTKNLSPEQISLSALRGSGXXXXXXXXXXXXXXXXXXPGWLRLTS 250
M IIK Q+LKHLSRFTKNLSP++I+LS L+G G P WL +T
Sbjct: 1 MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGQLTNLELDEEVLQNVLELPTWLAITR 60
Query: 251 AKCNRASFRIQWTKLKTAPIVLNLDEVHIALEVCSEPRVMNPSAAGALPV-PGKYSYIHK 427
CNRAS RIQWTKLKT PI L LD+V + ++ C +PR N + AL +Y + K
Sbjct: 61 VYCNRASIRIQWTKLKTHPICLCLDKVEVEMKTCEDPRPPNGQSPIALASGQSEYGFAEK 120
Query: 428 VIDGISVAVNHVQIDFNCDAFTSSVQISRVTVESRTPDGRKGDLRLTRIKCTDTGQLLIF 607
V++G+ + VN + I + AF +S ++ ++ S P+ ++ DLRLTRI G++L F
Sbjct: 121 VVEGMFIIVNSITIKIHSKAFHASFELWQLQGYSVNPNWQQSDLRLTRITDPCRGEVLTF 180
Query: 608 KELEWQSARIEAKA 649
KE+ WQ+ RIEA A
Sbjct: 181 KEITWQTLRIEADA 194
>AL033520-3|CAI20282.1| 1440|Homo sapiens RP3-349A12.1 protein.
Length = 1440
Score = 164 bits (399), Expect = 2e-40
Identities = 85/194 (43%), Positives = 117/194 (60%), Gaps = 1/194 (0%)
Frame = +2
Query: 71 MVTIIKNQLLKHLSRFTKNLSPEQISLSALRGSGXXXXXXXXXXXXXXXXXXPGWLRLTS 250
M IIK Q+LKHLSRFTKNLSP++I+LS L+G G P WL +T
Sbjct: 1 MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGQLTNLELDEEVLQNVLELPTWLAITR 60
Query: 251 AKCNRASFRIQWTKLKTAPIVLNLDEVHIALEVCSEPRVMNPSAAGALPV-PGKYSYIHK 427
CNRAS RIQWTKLKT PI L LD+V + ++ C +PR N + AL +Y + K
Sbjct: 61 VYCNRASIRIQWTKLKTHPICLCLDKVEVEMKTCEDPRPPNGQSPIALASGQSEYGFAEK 120
Query: 428 VIDGISVAVNHVQIDFNCDAFTSSVQISRVTVESRTPDGRKGDLRLTRIKCTDTGQLLIF 607
V++G+ + VN + I + AF +S ++ ++ S P+ ++ DLRLTRI G++L F
Sbjct: 121 VVEGMFIIVNSITIKIHSKAFHASFELWQLQGYSVNPNWQQSDLRLTRITDPCRGEVLTF 180
Query: 608 KELEWQSARIEAKA 649
KE+ WQ+ RIEA A
Sbjct: 181 KEITWQTLRIEADA 194
>AK000309-1|BAA91074.1| 736|Homo sapiens protein ( Homo sapiens
cDNA FLJ20302 fis, clone HEP06648. ).
Length = 736
Score = 164 bits (399), Expect = 2e-40
Identities = 85/194 (43%), Positives = 117/194 (60%), Gaps = 1/194 (0%)
Frame = +2
Query: 71 MVTIIKNQLLKHLSRFTKNLSPEQISLSALRGSGXXXXXXXXXXXXXXXXXXPGWLRLTS 250
M IIK Q+LKHLSRFTKNLSP++I+LS L+G G P WL +T
Sbjct: 1 MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGQLTNLELDEEVLQNVLELPTWLAITR 60
Query: 251 AKCNRASFRIQWTKLKTAPIVLNLDEVHIALEVCSEPRVMNPSAAGALPV-PGKYSYIHK 427
CNRAS RIQWTKLKT PI L LD+V + ++ C +PR N + AL +Y + K
Sbjct: 61 VYCNRASIRIQWTKLKTHPICLCLDKVEVEMKTCEDPRPPNGQSPIALASGQSEYGFAEK 120
Query: 428 VIDGISVAVNHVQIDFNCDAFTSSVQISRVTVESRTPDGRKGDLRLTRIKCTDTGQLLIF 607
V++G+ + VN + I + AF +S ++ ++ S P+ ++ DLRLTRI G++L F
Sbjct: 121 VVEGMFIIVNSITIKIHSKAFHASFELWQLQGYSVNPNWQQSDLRLTRITDPCRGEVLTF 180
Query: 608 KELEWQSARIEAKA 649
KE+ WQ+ RIEA A
Sbjct: 181 KEITWQTLRIEADA 194
>AB126777-1|BAD32740.1| 1440|Homo sapiens ICBP90 binding protein 1
protein.
Length = 1440
Score = 164 bits (399), Expect = 2e-40
Identities = 85/194 (43%), Positives = 117/194 (60%), Gaps = 1/194 (0%)
Frame = +2
Query: 71 MVTIIKNQLLKHLSRFTKNLSPEQISLSALRGSGXXXXXXXXXXXXXXXXXXPGWLRLTS 250
M IIK Q+LKHLSRFTKNLSP++I+LS L+G G P WL +T
Sbjct: 1 MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGQLTNLELDEEVLQNVLELPTWLAITR 60
Query: 251 AKCNRASFRIQWTKLKTAPIVLNLDEVHIALEVCSEPRVMNPSAAGALPV-PGKYSYIHK 427
CNRAS RIQWTKLKT PI L LD+V + ++ C +PR N + AL +Y + K
Sbjct: 61 VYCNRASIRIQWTKLKTHPICLCLDKVEVEMKTCEDPRPPNGQSPIALASGQSEYGFAEK 120
Query: 428 VIDGISVAVNHVQIDFNCDAFTSSVQISRVTVESRTPDGRKGDLRLTRIKCTDTGQLLIF 607
V++G+ + VN + I + AF +S ++ ++ S P+ ++ DLRLTRI G++L F
Sbjct: 121 VVEGMFIIVNSITIKIHSKAFHASFELWQLQGYSVNPNWQQSDLRLTRITDPCRGEVLTF 180
Query: 608 KELEWQSARIEAKA 649
KE+ WQ+ RIEA A
Sbjct: 181 KEITWQTLRIEADA 194
>BX640641-1|CAE45788.1| 352|Homo sapiens hypothetical protein
protein.
Length = 352
Score = 144 bits (349), Expect = 2e-34
Identities = 74/181 (40%), Positives = 107/181 (59%), Gaps = 1/181 (0%)
Frame = +2
Query: 110 SRFTKNLSPEQISLSALRGSGXXXXXXXXXXXXXXXXXXPGWLRLTSAKCNRASFRIQWT 289
+RFTKNLSP++I+LS L+G G P WL +T CNRAS RIQWT
Sbjct: 21 ARFTKNLSPDKINLSTLKGEGQLTNLELDEEVLQNVLELPTWLAITRVYCNRASIRIQWT 80
Query: 290 KLKTAPIVLNLDEVHIALEVCSEPRVMNPSAAGALPV-PGKYSYIHKVIDGISVAVNHVQ 466
+LKT PI L LD+V + ++ C +PR N + AL +Y + KV++G+ + VN +
Sbjct: 81 RLKTHPICLCLDKVEVEMKTCEDPRPPNGQSPIALASGQSEYGFAEKVVEGMFIIVNSIT 140
Query: 467 IDFNCDAFTSSVQISRVTVESRTPDGRKGDLRLTRIKCTDTGQLLIFKELEWQSARIEAK 646
I + AF +S ++ ++ S P+ ++ DLRLTRI G++L FKE+ WQ+ RIEA
Sbjct: 141 IKIHSKAFHASFELWQLQGYSVNPNWQQSDLRLTRITDPCRGEVLTFKEITWQTLRIEAD 200
Query: 647 A 649
A
Sbjct: 201 A 201
>AB014601-1|BAA31676.2| 1354|Homo sapiens KIAA0701 protein protein.
Length = 1354
Score = 72.5 bits (170), Expect = 1e-12
Identities = 34/81 (41%), Positives = 50/81 (61%)
Frame = +2
Query: 407 KYSYIHKVIDGISVAVNHVQIDFNCDAFTSSVQISRVTVESRTPDGRKGDLRLTRIKCTD 586
+Y + KV++GISV+VN + I AF +S ++S++ + S GDLR TRI+
Sbjct: 4 EYGFAEKVVEGISVSVNSIVIRIGAKAFNASFELSQLRIYSVNAHWEHGDLRFTRIQDPQ 63
Query: 587 TGQLLIFKELEWQSARIEAKA 649
G++L FKE+ WQ RIEA A
Sbjct: 64 RGEVLTFKEINWQMIRIEADA 84
>BC132978-1|AAI32979.1| 412|Homo sapiens VPS13B protein protein.
Length = 412
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/85 (21%), Positives = 34/85 (40%)
Frame = +2
Query: 95 LLKHLSRFTKNLSPEQISLSALRGSGXXXXXXXXXXXXXXXXXXPGWLRLTSAKCNRASF 274
L+ +++R+ KNL P + LS G P S +
Sbjct: 10 LMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLP--FTFLSGHIHELRI 67
Query: 275 RIQWTKLKTAPIVLNLDEVHIALEV 349
+ WTKL + P+V+ ++ + L++
Sbjct: 68 HVPWTKLGSEPVVITINTMECILKL 92
>BC132976-1|AAI32977.1| 412|Homo sapiens VPS13B protein protein.
Length = 412
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/85 (21%), Positives = 34/85 (40%)
Frame = +2
Query: 95 LLKHLSRFTKNLSPEQISLSALRGSGXXXXXXXXXXXXXXXXXXPGWLRLTSAKCNRASF 274
L+ +++R+ KNL P + LS G P S +
Sbjct: 10 LMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLP--FTFLSGHIHELRI 67
Query: 275 RIQWTKLKTAPIVLNLDEVHIALEV 349
+ WTKL + P+V+ ++ + L++
Sbjct: 68 HVPWTKLGSEPVVITINTMECILKL 92
>AY223818-1|AAP41106.1| 412|Homo sapiens Cohen syndrome 1 protein
splice variant 4 protein.
Length = 412
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/85 (21%), Positives = 34/85 (40%)
Frame = +2
Query: 95 LLKHLSRFTKNLSPEQISLSALRGSGXXXXXXXXXXXXXXXXXXPGWLRLTSAKCNRASF 274
L+ +++R+ KNL P + LS G P S +
Sbjct: 10 LMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLP--FTFLSGHIHELRI 67
Query: 275 RIQWTKLKTAPIVLNLDEVHIALEV 349
+ WTKL + P+V+ ++ + L++
Sbjct: 68 HVPWTKLGSEPVVITINTMECILKL 92
>AY223817-1|AAP41105.1| 863|Homo sapiens Cohen syndrome 1 protein
splice variant 3 protein.
Length = 863
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/85 (21%), Positives = 34/85 (40%)
Frame = +2
Query: 95 LLKHLSRFTKNLSPEQISLSALRGSGXXXXXXXXXXXXXXXXXXPGWLRLTSAKCNRASF 274
L+ +++R+ KNL P + LS G P S +
Sbjct: 10 LMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLP--FTFLSGHIHELRI 67
Query: 275 RIQWTKLKTAPIVLNLDEVHIALEV 349
+ WTKL + P+V+ ++ + L++
Sbjct: 68 HVPWTKLGSEPVVITINTMECILKL 92
>AY223816-1|AAP41104.1| 1427|Homo sapiens Cohen syndrome 1 protein
splice variant 2 protein.
Length = 1427
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/85 (21%), Positives = 34/85 (40%)
Frame = +2
Query: 95 LLKHLSRFTKNLSPEQISLSALRGSGXXXXXXXXXXXXXXXXXXPGWLRLTSAKCNRASF 274
L+ +++R+ KNL P + LS G P S +
Sbjct: 10 LMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLP--FTFLSGHIHELRI 67
Query: 275 RIQWTKLKTAPIVLNLDEVHIALEV 349
+ WTKL + P+V+ ++ + L++
Sbjct: 68 HVPWTKLGSEPVVITINTMECILKL 92
>AY223815-1|AAP41103.1| 3997|Homo sapiens Cohen syndrome 1 protein
splice variant 1 protein.
Length = 3997
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/85 (21%), Positives = 34/85 (40%)
Frame = +2
Query: 95 LLKHLSRFTKNLSPEQISLSALRGSGXXXXXXXXXXXXXXXXXXPGWLRLTSAKCNRASF 274
L+ +++R+ KNL P + LS G P S +
Sbjct: 10 LMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLP--FTFLSGHIHELRI 67
Query: 275 RIQWTKLKTAPIVLNLDEVHIALEV 349
+ WTKL + P+V+ ++ + L++
Sbjct: 68 HVPWTKLGSEPVVITINTMECILKL 92
>AY223814-1|AAP41102.1| 4022|Homo sapiens Cohen syndrome 1 protein
protein.
Length = 4022
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/85 (21%), Positives = 34/85 (40%)
Frame = +2
Query: 95 LLKHLSRFTKNLSPEQISLSALRGSGXXXXXXXXXXXXXXXXXXPGWLRLTSAKCNRASF 274
L+ +++R+ KNL P + LS G P S +
Sbjct: 10 LMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLP--FTFLSGHIHELRI 67
Query: 275 RIQWTKLKTAPIVLNLDEVHIALEV 349
+ WTKL + P+V+ ++ + L++
Sbjct: 68 HVPWTKLGSEPVVITINTMECILKL 92
>AK223122-1|BAD96842.1| 412|Homo sapiens Cohen syndrome 1 protein
isoform 4 variant protein.
Length = 412
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/85 (21%), Positives = 34/85 (40%)
Frame = +2
Query: 95 LLKHLSRFTKNLSPEQISLSALRGSGXXXXXXXXXXXXXXXXXXPGWLRLTSAKCNRASF 274
L+ +++R+ KNL P + LS G P S +
Sbjct: 10 LMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLP--FTFLSGHIHELRI 67
Query: 275 RIQWTKLKTAPIVLNLDEVHIALEV 349
+ WTKL + P+V+ ++ + L++
Sbjct: 68 HVPWTKLGSEPVVITINTMECILKL 92
>AK000590-1|BAA91275.1| 412|Homo sapiens protein ( Homo sapiens
cDNA FLJ20583 fis, clone KAT09685. ).
Length = 412
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/85 (21%), Positives = 34/85 (40%)
Frame = +2
Query: 95 LLKHLSRFTKNLSPEQISLSALRGSGXXXXXXXXXXXXXXXXXXPGWLRLTSAKCNRASF 274
L+ +++R+ KNL P + LS G P S +
Sbjct: 10 LMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLP--FTFLSGHIHELRI 67
Query: 275 RIQWTKLKTAPIVLNLDEVHIALEV 349
+ WTKL + P+V+ ++ + L++
Sbjct: 68 HVPWTKLGSEPVVITINTMECILKL 92
>AJ608773-1|CAE75585.1| 3997|Homo sapiens VPS13B-2A protein protein.
Length = 3997
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/85 (21%), Positives = 34/85 (40%)
Frame = +2
Query: 95 LLKHLSRFTKNLSPEQISLSALRGSGXXXXXXXXXXXXXXXXXXPGWLRLTSAKCNRASF 274
L+ +++R+ KNL P + LS G P S +
Sbjct: 10 LMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLP--FTFLSGHIHELRI 67
Query: 275 RIQWTKLKTAPIVLNLDEVHIALEV 349
+ WTKL + P+V+ ++ + L++
Sbjct: 68 HVPWTKLGSEPVVITINTMECILKL 92
>AJ608772-1|CAE75584.1| 4022|Homo sapiens VPS13B-1A protein protein.
Length = 4022
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/85 (21%), Positives = 34/85 (40%)
Frame = +2
Query: 95 LLKHLSRFTKNLSPEQISLSALRGSGXXXXXXXXXXXXXXXXXXPGWLRLTSAKCNRASF 274
L+ +++R+ KNL P + LS G P S +
Sbjct: 10 LMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLP--FTFLSGHIHELRI 67
Query: 275 RIQWTKLKTAPIVLNLDEVHIALEV 349
+ WTKL + P+V+ ++ + L++
Sbjct: 68 HVPWTKLGSEPVVITINTMECILKL 92
>U29538-1|AAC35421.1| 280|Homo sapiens FHL-1 protein.
Length = 280
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 280 TMDQTEDCAHCTESRRSPYSFGGMFRTSGYESECGRCFTCSRKI 411
T +T+ HC + ++ S G ++ + ++C C TCS+K+
Sbjct: 152 TCHETKFAKHCVKCNKAITSGGITYQDQPWHADCFVCVTCSKKL 195
>CR456974-1|CAG33255.1| 280|Homo sapiens FHL1 protein.
Length = 280
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 280 TMDQTEDCAHCTESRRSPYSFGGMFRTSGYESECGRCFTCSRKI 411
T +T+ HC + ++ S G ++ + ++C C TCS+K+
Sbjct: 152 TCHETKFAKHCVKCNKAITSGGITYQDQPWHADCFVCVTCSKKL 195
>BC088369-1|AAH88369.1| 296|Homo sapiens FHL1 protein protein.
Length = 296
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 280 TMDQTEDCAHCTESRRSPYSFGGMFRTSGYESECGRCFTCSRKI 411
T +T+ HC + ++ S G ++ + ++C C TCS+K+
Sbjct: 168 TCHETKFAKHCVKCNKAITSGGITYQDQPWHADCFVCVTCSKKL 211
>BC010998-1|AAH10998.1| 280|Homo sapiens four and a half LIM
domains 1 protein.
Length = 280
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 280 TMDQTEDCAHCTESRRSPYSFGGMFRTSGYESECGRCFTCSRKI 411
T +T+ HC + ++ S G ++ + ++C C TCS+K+
Sbjct: 152 TCHETKFAKHCVKCNKAITSGGITYQDQPWHADCFVCVTCSKKL 195
>AL078638-10|CAC18881.1| 280|Homo sapiens four and a half LIM
domains 1 protein.
Length = 280
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 280 TMDQTEDCAHCTESRRSPYSFGGMFRTSGYESECGRCFTCSRKI 411
T +T+ HC + ++ S G ++ + ++C C TCS+K+
Sbjct: 152 TCHETKFAKHCVKCNKAITSGGITYQDQPWHADCFVCVTCSKKL 195
>AL078638-9|CAI41061.1| 257|Homo sapiens four and a half LIM
domains 1 protein.
Length = 257
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 280 TMDQTEDCAHCTESRRSPYSFGGMFRTSGYESECGRCFTCSRKI 411
T +T+ HC + ++ S G ++ + ++C C TCS+K+
Sbjct: 152 TCHETKFAKHCVKCNKAITSGGITYQDQPWHADCFVCVTCSKKL 195
>AL078638-8|CAI41062.1| 323|Homo sapiens four and a half LIM
domains 1 protein.
Length = 323
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 280 TMDQTEDCAHCTESRRSPYSFGGMFRTSGYESECGRCFTCSRKI 411
T +T+ HC + ++ S G ++ + ++C C TCS+K+
Sbjct: 152 TCHETKFAKHCVKCNKAITSGGITYQDQPWHADCFVCVTCSKKL 195
>AL078638-7|CAI41060.1| 207|Homo sapiens four and a half LIM
domains 1 protein.
Length = 207
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 280 TMDQTEDCAHCTESRRSPYSFGGMFRTSGYESECGRCFTCSRKI 411
T +T+ HC + ++ S G ++ + ++C C TCS+K+
Sbjct: 152 TCHETKFAKHCVKCNKAITSGGITYQDQPWHADCFVCVTCSKKL 195
>AL078638-6|CAI41059.1| 205|Homo sapiens four and a half LIM
domains 1 protein.
Length = 205
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 280 TMDQTEDCAHCTESRRSPYSFGGMFRTSGYESECGRCFTCSRKI 411
T +T+ HC + ++ S G ++ + ++C C TCS+K+
Sbjct: 152 TCHETKFAKHCVKCNKAITSGGITYQDQPWHADCFVCVTCSKKL 195
>AL078638-5|CAI41058.1| 204|Homo sapiens four and a half LIM
domains 1 protein.
Length = 204
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 280 TMDQTEDCAHCTESRRSPYSFGGMFRTSGYESECGRCFTCSRKI 411
T +T+ HC + ++ S G ++ + ++C C TCS+K+
Sbjct: 152 TCHETKFAKHCVKCNKAITSGGITYQDQPWHADCFVCVTCSKKL 195
>AL078638-2|CAI41055.1| 296|Homo sapiens four and a half LIM
domains 1 protein.
Length = 296
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 280 TMDQTEDCAHCTESRRSPYSFGGMFRTSGYESECGRCFTCSRKI 411
T +T+ HC + ++ S G ++ + ++C C TCS+K+
Sbjct: 168 TCHETKFAKHCVKCNKAITSGGITYQDQPWHADCFVCVTCSKKL 211
>AK223299-1|BAD97019.1| 280|Homo sapiens four and a half LIM
domains 1 variant protein.
Length = 280
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 280 TMDQTEDCAHCTESRRSPYSFGGMFRTSGYESECGRCFTCSRKI 411
T +T+ HC + ++ S G ++ + ++C C TCS+K+
Sbjct: 152 TCHETKFAEHCVKCNKAITSGGITYQDQPWHADCFVCVTCSKKL 195
>AF110763-1|AAD21579.1| 280|Homo sapiens skeletal muscle
LIM-protein 1 protein.
Length = 280
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 280 TMDQTEDCAHCTESRRSPYSFGGMFRTSGYESECGRCFTCSRKI 411
T +T+ HC + ++ S G ++ + ++C C TCS+K+
Sbjct: 152 TCHETKFAKHCVKCNKAITSGGITYQDQPWHADCFVCVTCSKKL 195
>AF098518-1|AAC72390.1| 323|Homo sapiens four and a half LIM
domains 1 protein isoform B protein.
Length = 323
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 280 TMDQTEDCAHCTESRRSPYSFGGMFRTSGYESECGRCFTCSRKI 411
T +T+ HC + ++ S G ++ + ++C C TCS+K+
Sbjct: 152 TCHETKFAKHCVKCNKAITSGGITYQDQPWHADCFVCVTCSKKL 195
>AF063002-1|AAC72886.1| 323|Homo sapiens LIM protein SLIMMER
protein.
Length = 323
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 280 TMDQTEDCAHCTESRRSPYSFGGMFRTSGYESECGRCFTCSRKI 411
T +T+ HC + ++ S G ++ + ++C C TCS+K+
Sbjct: 152 TCHETKFAKHCVKCNKAITSGGITYQDQPWHADCFVCVTCSKKL 195
>U60118-1|AAC50795.1| 150|Homo sapiens skeletal muscle LIM-protein
SLIM protein.
Length = 150
Score = 31.1 bits (67), Expect = 3.6
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 280 TMDQTEDCAHCTESRRSPYSFGGMFRTSGYESECGRCFTCSRKI 411
T +T+ HC + ++ S G ++ + ++C C TCS+K+
Sbjct: 47 TCHETKLAKHCVKCNKAITSGGITYQDQPWHADCFVCVTCSKKL 90
>U60115-1|AAC52021.1| 280|Homo sapiens skeletal muscle LIM-protein
FHL1 protein.
Length = 280
Score = 31.1 bits (67), Expect = 3.6
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 280 TMDQTEDCAHCTESRRSPYSFGGMFRTSGYESECGRCFTCSRKI 411
T +T+ HC + ++ S G ++ + ++C C TCS+K+
Sbjct: 152 TCHETKLAKHCVKCNKAITSGGITYQDQPWHADCFVCVTCSKKL 195
>BC035760-1|AAH35760.1| 595|Homo sapiens ZNF440 protein protein.
Length = 595
Score = 31.1 bits (67), Expect = 3.6
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 376 ECGRCFTCSRKI*LYTQ-GDRRNLSGCESCTNRL 474
ECG+ FTC R + ++ + R+NL C+ C L
Sbjct: 288 ECGKAFTCPRYVRIHERTHSRKNLYECKQCGKAL 321
>AK095252-1|BAC04510.1| 595|Homo sapiens protein ( Homo sapiens
cDNA FLJ37933 fis, clone CTONG2005028, moderately
similar to ZINC FINGER PROTEIN ZFP-36. ).
Length = 595
Score = 31.1 bits (67), Expect = 3.6
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 376 ECGRCFTCSRKI*LYTQ-GDRRNLSGCESCTNRL 474
ECG+ FTC R + ++ + R+NL C+ C L
Sbjct: 288 ECGKAFTCPRYVRIHERTHSRKNLYECKQCGKAL 321
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,481,004
Number of Sequences: 237096
Number of extensions: 1929384
Number of successful extensions: 3712
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 3594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3696
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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