Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0056
         (481 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    38   0.15 
UniRef50_A5E1Y6 Cluster: Putative uncharacterized protein; n=1; ...    32   5.8  

>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 37.5 bits (83), Expect = 0.15
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = +2

Query: 425 RFFPPRGGARYPIRPIVSR 481
           R+  PRGGARYPIRPIVSR
Sbjct: 255 RYRRPRGGARYPIRPIVSR 273


>UniRef50_A5E1Y6 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 611

 Score = 32.3 bits (70), Expect = 5.8
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
 Frame = +3

Query: 258 DF-CLFCYEYYILTYKYAVMLFG--CENCFNSFVPNPFASEK*STSMISKQNLRVSYQD 425
           DF C+ C E Y  T  Y+       C  C+N +V N   S K  T M  + +L + +QD
Sbjct: 160 DFTCIICCETYPTTKVYSTTCNHKYCIECYNQYVANEINSGKLITCMEPECSLTIPHQD 218


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 439,442,704
Number of Sequences: 1657284
Number of extensions: 7943737
Number of successful extensions: 15565
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15551
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27290400475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)