Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0056
         (481 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.       23   4.1  
U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    23   5.4  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   5.4  
L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.       23   7.2  
L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.       23   7.2  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         22   9.5  

>L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -1

Query: 235 RFVTETKTYNYHYS*NTHNKS*TWACVHVP 146
           R+VT  +T+ +HY+  ++ +S  W     P
Sbjct: 29  RYVTMGETWLHHYTPESNRQSAQWTATGEP 58


>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 414 KHGGFALISYSCFTF 370
           KHGG +L+ + CF++
Sbjct: 97  KHGGGSLMVWGCFSY 111


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 163 PTSMTCCEYFRNNGNC 210
           PTS T  +Y R N NC
Sbjct: 225 PTSTTMRDYSRKNENC 240


>L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -1

Query: 235 RFVTETKTYNYHYS*NTHNKS*TW 164
           R+VT  +T+ +HY+  ++ +S  W
Sbjct: 29  RYVTMDETWLHHYTPKSNRQSSEW 52


>L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -1

Query: 235 RFVTETKTYNYHYS*NTHNKS*TW 164
           R+VT  +T+ +HY+  ++ +S  W
Sbjct: 29  RYVTMDETWLHHYTPKSNRQSSEW 52


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -3

Query: 386 TRASLFACKRIRYERIKAVFTPK 318
           T AS+FA      ERIK   TPK
Sbjct: 376 TVASVFAQHDTELERIKRYSTPK 398


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 481,178
Number of Sequences: 2352
Number of extensions: 9584
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 41863041
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)