Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0055
(831 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 469 e-132
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 464 e-131
SB_56| Best HMM Match : Actin (HMM E-Value=0) 463 e-131
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 458 e-129
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 361 e-100
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 246 2e-65
SB_54| Best HMM Match : Actin (HMM E-Value=0) 218 5e-57
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 210 1e-54
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 199 2e-51
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 172 3e-43
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 106 3e-23
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 79 3e-15
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 69 6e-12
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 3e-09
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 58 7e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 3e-08
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.002
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.070
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.093
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 34 0.12
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.38
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.38
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 33 0.38
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 32 0.66
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.87
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 0.87
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.87
SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 31 1.1
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 31 1.1
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 1.5
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 31 1.5
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 31 1.5
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 31 1.5
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 30 2.0
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 30 2.0
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 2.0
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 2.0
SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 30 2.0
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 2.0
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 30 2.6
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 30 2.6
SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 30 2.6
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94) 29 3.5
SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54) 29 3.5
SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11) 29 3.5
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 29 4.6
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 29 4.6
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 29 4.6
SB_32407| Best HMM Match : WSC (HMM E-Value=0.0008) 29 6.1
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 29 6.1
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 29 6.1
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6) 29 6.1
SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05) 29 6.1
SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 29 6.1
SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 28 8.1
SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59) 28 8.1
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_10665| Best HMM Match : PT (HMM E-Value=6.2) 28 8.1
SB_8208| Best HMM Match : ShTK (HMM E-Value=1.2e-21) 28 8.1
SB_36012| Best HMM Match : DUF755 (HMM E-Value=0.064) 28 8.1
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 469 bits (1157), Expect = e-132
Identities = 218/227 (96%), Positives = 225/227 (99%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 296
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 297 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 476
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 477 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 656
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 657 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVPLDFSRK 797
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV LDF ++
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 227
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 464 bits (1144), Expect = e-131
Identities = 216/227 (95%), Positives = 224/227 (98%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 296
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 297 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 476
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 477 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 656
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLD 180
Query: 657 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVPLDFSRK 797
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV LDF ++
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 227
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 463 bits (1142), Expect = e-131
Identities = 216/225 (96%), Positives = 223/225 (99%)
Frame = +3
Query: 123 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 302
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 303 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 482
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 483 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 662
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 663 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVPLDFSRK 797
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV LDF ++
Sbjct: 182 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 226
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 458 bits (1130), Expect = e-129
Identities = 214/225 (95%), Positives = 222/225 (98%)
Frame = +3
Query: 123 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 302
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 303 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 482
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 483 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 662
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 663 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVPLDFSRK 797
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YV LDF ++
Sbjct: 182 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQE 226
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 361 bits (889), Expect = e-100
Identities = 180/227 (79%), Positives = 190/227 (83%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 296
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 297 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 476
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 477 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 656
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DS G + H +
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDS------------GDGVSHTV---- 164
Query: 657 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVPLDFSRK 797
I ERGYSFTTTAEREIVRDIKEKLCYV LDF ++
Sbjct: 165 -----------PIYEERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 200
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 246 bits (601), Expect = 2e-65
Identities = 114/217 (52%), Positives = 154/217 (70%), Gaps = 3/217 (1%)
Frame = +3
Query: 135 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 308
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 309 ILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 485
+L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 486 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 665
MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AG
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAG 186
Query: 666 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 776
RD+T YL+K++ RGY+F TA+ E VR +KEKLCYV
Sbjct: 187 RDITKYLIKLMLLRGYAFNHTADFETVRMMKEKLCYV 223
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 218 bits (532), Expect = 5e-57
Identities = 96/143 (67%), Positives = 120/143 (83%)
Frame = +3
Query: 369 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 548
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 549 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 728
ASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF +T
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQST 2248
Query: 729 AEREIVRDIKEKLCYVPLDFSRK 797
AE++I+RD+KE LCY +D+ R+
Sbjct: 2249 AEQQIIRDLKETLCYCAMDYERE 2271
Score = 59.7 bits (138), Expect = 3e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 141 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 242
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 210 bits (513), Expect = 1e-54
Identities = 99/112 (88%), Positives = 107/112 (95%)
Frame = +3
Query: 462 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 641
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 642 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVPLDFSRK 797
I+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV LDF ++
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 189
Score = 183 bits (445), Expect = 2e-46
Identities = 83/89 (93%), Positives = 86/89 (96%)
Frame = +3
Query: 123 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 302
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 303 RGILTLKYPIEHGIVTNWDDMEKIWHHTF 389
RGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 199 bits (486), Expect = 2e-51
Identities = 93/102 (91%), Positives = 98/102 (96%)
Frame = +3
Query: 483 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 662
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 663 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVPLDF 788
GRDLTDYLMK++TERGYSFTTTAEREIVRDIKEKLCYV LDF
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLCYVALDF 102
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 172 bits (419), Expect = 3e-43
Identities = 74/116 (63%), Positives = 101/116 (87%)
Frame = +3
Query: 417 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 596
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 597 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 764
SH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F +++E EIVR IKE+
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE 241
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 106 bits (254), Expect = 3e-23
Identities = 47/126 (37%), Positives = 80/126 (63%)
Frame = +3
Query: 327 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 506
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 507 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 686
PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQC 122
Query: 687 MKILTE 704
++ E
Sbjct: 123 RQMFEE 128
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 79.4 bits (187), Expect = 3e-15
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Frame = +3
Query: 528 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TE 704
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 705 RGYSFTTTAEREIVRDIKEKLCYVPLD 785
RG++FT+++ +IV DIKEK+CY+ D
Sbjct: 827 RGHNFTSSSGWQIVNDIKEKICYLSKD 853
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +3
Query: 111 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 281
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 282 GDEAQSKRGILTL 320
GD A +K G++ L
Sbjct: 753 GDAAVAKSGVMHL 765
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 68.5 bits (160), Expect = 6e-12
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Frame = +3
Query: 495 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 671
++ T A+ + S RT TG V+DSGDGV+H +P+ EGY + I + +AGRD
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 97
Query: 672 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVPLDFSRKW 800
+T ++ ++L ER E + IKE+ Y+ D ++++
Sbjct: 98 ITFFVQQLLREREMGIPPEQSMETAKTIKERWGYICPDIAKEF 140
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 3e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 242
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 58.4 bits (135), Expect = 7e-09
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 8/182 (4%)
Frame = +3
Query: 129 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 308
++A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKD 283
Query: 309 ILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 482
L Y P + G + NWD ++IW +TF E + M +
Sbjct: 284 YSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE--------------------GLEDAMDE 323
Query: 483 IMFETFNTPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 644
I+FE +N A+ A LS Y S +V+D+G +H VP++ G + A+
Sbjct: 324 ILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKVIKKAV 383
Query: 645 LR 650
R
Sbjct: 384 RR 385
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.4 bits (130), Expect = 3e-08
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = +3
Query: 255 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 434
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.50
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 564 TGIVLDSGDGVSHTVPI 614
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -2
Query: 239 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 123
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +3
Query: 372 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 551
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 552 SGRTTGIV 575
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 35.1 bits (77), Expect = 0.070
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +1
Query: 508 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 645
PP P P + TRP VP +T PTP P T P P+
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 487 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCW--TPATVSPTPCPSTKDTHSPTPSC 648
CS+HS +P C PSK C + V+PP + T ++ P C ++ P C
Sbjct: 1521 CSEHSCKPEC--PSKCCMK----VLPPTTLGQNTANSLCPVYCLTSCKPDCPIKCC 1570
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 34.7 bits (76), Expect = 0.093
Identities = 29/77 (37%), Positives = 34/77 (44%)
Frame = +2
Query: 518 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDP 697
RR S A R RS R R+ RRR RR R+P H S SRSR R P
Sbjct: 211 RRSHSPAHHRRSRSRSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSR-SRSPRRRH 269
Query: 698 HRARLLVHYHRRAGNRS 748
R+R H R+ + S
Sbjct: 270 SRSRSPTHRRHRSRSHS 286
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 508 PPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTP-CPSTKDTHSPTPS 645
P TSP + P +R P+ PP C + V PTP S+K + SP+PS
Sbjct: 316 PAFTSPPNTPTTRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 496 HSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 609
H+T P P T PS P C + P C+T T+SP PC
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSPKPC 702
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 511 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 609
PC SPS P + P C+T T+SP PC
Sbjct: 510 PCFSPSNPSPASH---LSPKPCFTSLTLSPKPC 539
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 33.5 bits (73), Expect = 0.21
Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +1
Query: 496 HSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTKDTHSPTPS 645
HST ++PS P + CT P P P + TP+T S PST T S TPS
Sbjct: 63 HSTPSAPSTPSTPSTPCT-PSTPSTPSTPSTPSTPSTPSAPSTPSTPS-TPS 112
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = +1
Query: 493 KHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTKDTHSP--TPS 645
K+ R ++PS PC+ T P P P + TP+T S TPC PST T S TPS
Sbjct: 2 KNPHRLKLSTPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPSTPITPS 55
Score = 28.7 bits (61), Expect = 6.1
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +1
Query: 517 TSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTKDTHSPTP 642
++PS PC+ T P P P + TP+T S TPC PST T S TP
Sbjct: 375 STPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPS-TP 416
Score = 28.3 bits (60), Expect = 8.1
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 490 SKHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTKDTHSPTPS 645
S ST +PS P + CT P P P + TP+T S TPC + + TPS
Sbjct: 22 STPSTPSTPRTPSTPSTPCT-PSTPSTPSTPITPSTPS-TPCTHSTPSAPSTPS 73
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 32.7 bits (71), Expect = 0.38
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 9/51 (17%)
Frame = +1
Query: 511 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC-----PSTKDTHSP 636
P T PC + CT+ +P +TP T TPC PST+ +H+P
Sbjct: 844 PSTKRYTPCYERYTPCTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +1
Query: 487 CSKHSTRPPCTSPSKPCSR----CTRPVVPPVSCWTPATVSPTPC 609
C++ T PCT PC+ CT P +TP+T TPC
Sbjct: 626 CTERYT--PCTERYIPCTERYTPCTERYTPSTERYTPSTERYTPC 668
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +1
Query: 511 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC 609
PCT PC + CT+ P +TP T TPC
Sbjct: 746 PCTERYTPCYERYTPCTKRYTPCTERYTPCTERYTPC 782
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 32.7 bits (71), Expect = 0.38
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +1
Query: 508 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 645
P SP+ P P P + TP T +PT TK T + TP+
Sbjct: 56 PTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPT 101
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1
Query: 502 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 645
T P T+P++ T P + TP +PTP T T +PT S
Sbjct: 42 TTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTS 89
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 508 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT-PCPSTKDTHSPTPS 645
P +P+KP P + TP T SPT P +T +PTP+
Sbjct: 31 PTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPT 77
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +1
Query: 499 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 639
+T P T K + T + P TP PTP T T +PT
Sbjct: 72 ATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPT 118
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Frame = +1
Query: 502 TRP-PCTSPS--KPCSRCTRPVVPPVSCWTPATVSP-TPCPS--TKDTHSPT 639
T+P P T+P+ KP P P + TP +P TP P+ T H+PT
Sbjct: 92 TKPTPATTPTPTKPTPTAHTPTTPTPTAHTPTKPTPKTPTPTTPTPTAHTPT 143
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +1
Query: 502 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP-TPS 645
T+P T+P+ T P S P +PTP T T +P TP+
Sbjct: 37 TKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPT 85
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +1
Query: 499 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP---TPCPSTKDTHSPTPS 645
ST P T+P+ T P + TP +P TP P+T PTP+
Sbjct: 46 STAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPA 97
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 508 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 603
P +P+KP + P P + TP T +PT
Sbjct: 117 PTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPT 148
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 32.7 bits (71), Expect = 0.38
Identities = 21/88 (23%), Positives = 30/88 (34%)
Frame = +1
Query: 382 IPSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVV 561
+PS M C PP S + T T+P+ P + T P
Sbjct: 86 LPSWMPCNCPPDEDDSKGGAAGAEEKEEGEGGGDTPTTAPTTA-ATTPTTPTTAPTTPTT 144
Query: 562 PPVSCWTPATVSPTPCPSTKDTHSPTPS 645
P + TP T + TP +P P+
Sbjct: 145 PTTAATTPTTAATTPAAGAAAAAAPPPA 172
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 31.9 bits (69), Expect = 0.66
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 505 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHS 633
+PP T+PSK T P+ P++ TP T T +TK T S
Sbjct: 383 KPPTTTPSK----ATAPISDPMTTTTPTTTKATTPTTTKATAS 421
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.87
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 318 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 470
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.87
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 214 GNTARGASSPAKPALHIPEPLSTT 143
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.87
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +3
Query: 459 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 575
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 31.5 bits (68), Expect = 0.87
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 362 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 186
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 193 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 251
Query: 185 CETGLAHT 162
CET L T
Sbjct: 252 CETQLVPT 259
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 31.5 bits (68), Expect = 0.87
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = -3
Query: 664 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNM 485
P+ + +W P T W +PSP+ T P ++T+W + +S++
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSL 152
Query: 484 IWVIFSLLALGLR 446
+I L + R
Sbjct: 153 YHIIGRLSGVHYR 165
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -3
Query: 664 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 527
P + S +P T W +PSP+ T P ++T+W
Sbjct: 57 PLSQYKTTFMSSTFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -3
Query: 664 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 527
P+ + +W S P T W P P+ T P ++T+W
Sbjct: 81 PSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSW 126
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.87
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 214 GNTARGASSPAKPALHIPEPLSTT 143
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1361
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -2
Query: 122 AHLELVKLVRCRCDKMKIKRPAVTANREKQIPIAGRCPCS 3
A L L+KL CRC K +R + + + IP C C+
Sbjct: 1296 APLSLLKLTTCRCVKTACRRDDLCSCKANDIPCTEACLCT 1335
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 362 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 186
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 251 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 309
Query: 185 CETGLAHT 162
CET L T
Sbjct: 310 CETQLVLT 317
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 362 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 186
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 71 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 129
Query: 185 CETGLAHT 162
CET L T
Sbjct: 130 CETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 362 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 186
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 105 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 163
Query: 185 CETGLAHT 162
CET L T
Sbjct: 164 CETQLVLT 171
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 362 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 186
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 388 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 446
Query: 185 CETGLAHT 162
CET L T
Sbjct: 447 CETQLVLT 454
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 362 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 186
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 229 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 287
Query: 185 CETGLAHT 162
CET L T
Sbjct: 288 CETQLVLT 295
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 496 HSTRPPCTSP--SKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTKDTHSPTP 642
H+T+PP T P +KP + R PP + P T P T P T H+ P
Sbjct: 137 HTTKPPTTKPQTTKPHTTKPRTTKPPTT--KPHTTKPHTTKPHTTKPHTTKP 186
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 30.7 bits (66), Expect = 1.5
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = -3
Query: 604 VWE--TPSPESSTIPVVRPD-------AYSESTAWMATYMAGVLNVSNMIWVIFSLLALG 452
VWE T P + T+P + D Y S +W+ VL N ++++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 451 LRGASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCAS 287
L A + T C T +L + ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 517 TSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTK 621
+SP KP T+PVVP P+ + P P PS+K
Sbjct: 1511 SSPPKPVKPSTKPVVPVKPVKPPSPIKPKPPIPSSK 1546
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 362 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 186
V+PV S D + S +C ++LSH + H M D +HG RS S
Sbjct: 153 VVPVFKKSSKDNPENYRPISLTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFS 211
Query: 185 CETGLAHT 162
CET L T
Sbjct: 212 CETQLVLT 219
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 389 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 222
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 210 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 268
Query: 221 DRGEHGARSIISCETGLAHT 162
+HG R +SCET L T
Sbjct: 269 SIFQHGFRQALSCETQLVLT 288
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 214 GNTARGASSPAKPALHIPEPLSTT 143
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 443 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 535
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 496 HSTRPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 645
H RPP S P +R T P P + PAT +PT +T + TP+
Sbjct: 27 HHQRPPLLPSQQLPHNRTTTPTTPTTTT-PPATTTPTKPTNTTPPATTTPT 76
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 499 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 645
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 137 TTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPPATTTPT 188
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +1
Query: 499 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPT-PCPSTKD-THSPTPSCVWT*P 663
+T P T+P+KP + T P + PAT +PT P +T T +PT S T P
Sbjct: 123 TTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPP 182
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +1
Query: 499 STRPPC-TSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 645
+T PP T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 52 TTTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 499 STRPPCTSPSKPCSRC---TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 645
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 109 TTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPT 160
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 389 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 222
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129
Query: 221 DRGEHGARSIISCETGLAHT 162
+HG R +SCET L T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 389 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 222
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 1609 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1667
Query: 221 DRGEHGARSIISCETGLAHT 162
+HG R +SCET L T
Sbjct: 1668 SIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 389 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 222
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 637 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 695
Query: 221 DRGEHGARSIISCETGLAHT 162
+HG R +SCET L T
Sbjct: 696 SIFQHGFRQALSCETQLVLT 715
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 2.0
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +1
Query: 523 PSKPCSRCTRPVVPP 567
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/83 (27%), Positives = 29/83 (34%)
Frame = +2
Query: 440 GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLR 619
G G + PDH + R P L V R+ + GL +R PH
Sbjct: 320 GPDHTHGVSKRTAPDHPLGLSK----RTAPDHTLGVSKRTAPDHPHGLSKRTAPHHPLGL 375
Query: 620 RIRTPPRHPASGLSRSRPHRLPH 688
T P HP R+ P PH
Sbjct: 376 SKSTAPDHPHGVSKRTAPDH-PH 397
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = +2
Query: 452 PQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRT 631
P G + PDH + ++H P L + R+ + G+ +R PH T
Sbjct: 192 PHGVSKRTAPDHPHGV--SKHTA--PDHTLGLSKRTGPDHTHGVSKRTAPHHPLGLSKHT 247
Query: 632 PPRHPASGLSR 664
P HP GLS+
Sbjct: 248 APDHP-HGLSK 257
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 389 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 222
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 1047 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1105
Query: 221 DRGEHGARSIISCETGLAHT 162
+HG R +SCET L T
Sbjct: 1106 SIFQHGFRQALSCETQLVLT 1125
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 389 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 222
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129
Query: 221 DRGEHGARSIISCETGLAHT 162
+HG R +SCET L T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +1
Query: 508 PPCTSPSKPCSRCTRP-VVPPVSCWTPATVSPTPCPSTKDTHSPTP 642
PP T P+ P S P VP + P V+P P + PTP
Sbjct: 332 PPVTEPAPPSSVVAPPPAVPTPATAPPPVVAPPPSVFASSSGVPTP 377
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 29.9 bits (64), Expect = 2.6
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = -2
Query: 302 FALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQR 138
FA CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKH 520
Query: 137 GNFFVAHLELVK 102
G V L+ K
Sbjct: 521 GQVDVLLLDFQK 532
>SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -2
Query: 110 LVKLVRCRCDKMKIKRPAVTANREKQIPIAGRCPC 6
L++L C C+K + KR + + Q+P C C
Sbjct: 620 LLELTTCSCEKSRCKRDDLCPCKSNQMPCTEACQC 654
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +1
Query: 511 PCTSPSKPCSRCTRPVVPPVS-----CWTPATVSPTPC 609
PC P PC P V PV C P V+ TPC
Sbjct: 551 PCVDPVTPCVDPVTPYVDPVKVSVTPCVDPVKVAVTPC 588
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 511 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 615
PC P PC P V PV V P PS
Sbjct: 376 PCVDPVTPCVDPVTPYVDPVKVAVTPCVDPVKVPS 410
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -2
Query: 296 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 162
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94)
Length = 592
Score = 29.5 bits (63), Expect = 3.5
Identities = 28/92 (30%), Positives = 34/92 (36%)
Frame = +2
Query: 500 QHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHR 679
Q RRHP R R+ + G+R R P +RR RT R + R R H
Sbjct: 356 QRGERERRHPPGVAICRYRTRQVSQRGVRERRNPPGVAIRRYRT--RQVSQRGERERRHH 413
Query: 680 LPHEDPHRARLLVHYHRRAGNRS*HQGEAVLR 775
P R R R R H G A+ R
Sbjct: 414 -PGVAICRYRTRQVSQRGKRERRHHPGVAICR 444
>SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54)
Length = 367
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 482 DHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIR 628
DH + I+ V RH L R R+ H +R L+ + H+A LR ++
Sbjct: 277 DHTQKIKEENKVLRHELLMLIRRTRALHEHREELQAQ---HKALLREVQ 322
>SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11)
Length = 231
Score = 29.5 bits (63), Expect = 3.5
Identities = 30/103 (29%), Positives = 41/103 (39%), Gaps = 6/103 (5%)
Frame = -2
Query: 800 PFPAEVKRDVAQLLLDVTNDFPLGGGSERVAALGEDLHEVVCEVATG*VQTQDGVGECVS 621
P V V ++L V + G G + + + +D V + A G V GVG+
Sbjct: 14 PMVVSVMMVVLVMMLMVRDSDDGGVGDDAIGRVSDD--GGVGDDADGRVSDDGGVGDDAD 71
Query: 620 --FVDGHGVGDTVAGVQHDTGG----TTGRVQREHGLDGDVHG 510
D GVGD G D GG GRV + G+ D G
Sbjct: 72 GRVSDDGGVGDDADGRVSDDGGVGDNAEGRVSDDGGVGDDAIG 114
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 544 CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 645
C+RP PPV+ T +T S T +T T + TP+
Sbjct: 620 CSRPTTPPVTT-TKSTTSSTTKGTTASTTTSTPT 652
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = +1
Query: 493 KHSTRPPCTSPSKPCSRCTRPVVPPVSC----WTPAT-VSPTPCPSTKDTHSPTP 642
KH + P PS P S ++P + P T + PTP P T +PTP
Sbjct: 205 KHPSYPSYKHPSYPSSHIQASLLPHIQASLLPLIPNTSIPPTPTPHTSIPPTPTP 259
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 29.1 bits (62), Expect = 4.6
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 362 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 186
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 204 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 262
Query: 185 CETGLAHT 162
CET L T
Sbjct: 263 CETQLVLT 270
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 29.1 bits (62), Expect = 4.6
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 362 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 186
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 2 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 60
Query: 185 CETGLAHT 162
CET L T
Sbjct: 61 CETQLVLT 68
>SB_32407| Best HMM Match : WSC (HMM E-Value=0.0008)
Length = 832
Score = 28.7 bits (61), Expect = 6.1
Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Frame = +2
Query: 461 QQREDDPDHVRNIQHARHVRR--HPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTP 634
+QR+ + +R ++H +H+RR R R R + R R LRR R
Sbjct: 231 RQRQRYLEKLRRLKHEKHLRRLKRLREQWGRRQRQLAREKRIRRENKRKERERLRRERVK 290
Query: 635 PRHPASGLSRSRPHRLPHEDPHR------ARLLVHYHRRAGNRS*HQGEAVLRPS*LQQE 796
R R+ E R ++L+ RRA R+ + E ++R LQQ+
Sbjct: 291 LMERLRRRKLERARRIRKERMKRLQMMKLRKILLERKRRAAKRARIRHEKLMRKLRLQQK 350
Query: 797 M 799
M
Sbjct: 351 M 351
>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 28.7 bits (61), Expect = 6.1
Identities = 26/77 (33%), Positives = 38/77 (49%)
Frame = +2
Query: 518 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDP 697
RR+ SR+ + R RS +R R+ R R R+ R+ S SRSR + P P
Sbjct: 147 RRYRSRSDS-RPRSRYRGRSRSRSRDRYRERRPRKSRSKSLD-RSRRSRSRSYSRPSPSP 204
Query: 698 HRARLLVHYHRRAGNRS 748
+R+R RR+ +RS
Sbjct: 205 YRSRRSRSRTRRSRSRS 221
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 447 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 575
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 505 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 642
RPP + C+ C P + P T PTP P + + +P P
Sbjct: 135 RPPVCPCKQECNFCCIEEEKPTTTKKPTT-KPTPAPHSSPSPTPPP 179
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +1
Query: 517 TSPSKPCS-RCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVW 654
T P P + + T P P T TV PT PS D T C W
Sbjct: 1691 TCPITPVNAKPTNPWTTPAPSPTATTVGPTLAPSQWDCSFETNLCSW 1737
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 547 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 651
T VVPP+ P V P+P + + SPTPSC+
Sbjct: 207 TPAVVPPI----PTLVVPSPL-TQPEVESPTPSCI 236
>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 28.7 bits (61), Expect = 6.1
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +2
Query: 446 PQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRI 625
PQ G EDD D+V+ ++ +RH + +V+ S RA RR R +R
Sbjct: 647 PQVDGANDEDDTDNVQLESRSQGQQRHSNSKSSVQSSSELVKRARTTRRLGVSRVKIRVS 706
Query: 626 RTPPRHPASGLSRSR 670
+T + P+ +R++
Sbjct: 707 QTHSQ-PSQATARTQ 720
>SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6)
Length = 187
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +1
Query: 523 PSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PV 666
PS P S PV V T T +PT C T + P+C+ PV
Sbjct: 85 PSSPVSPLPSPVPAVAATPSQTYCTSTPTSCTPTTTCYLQVPTCILIPPV 134
>SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +1
Query: 493 KHSTRPPCTSPSKPCSRCT--RPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 645
K TRP TS + S+ RP P++ +P S + P+ D HSPT S
Sbjct: 428 KPVTRPKTTSGTLSVSKSIPPRPSTEPITTSSPYRHSWSYVPNFVDYHSPTSS 480
>SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05)
Length = 2200
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +2
Query: 497 IQHARHVRRHPSRALAVRVRSYHRYRAGLRRRC---LPHRAHLRRIRT-PPRHPASGLSR 664
I H++ RH S+ L R R HR + RR + H ++L R R P ++ +
Sbjct: 1588 IHHSKEYYRHSSKILKSRTRHLHRVKKYWHRRINHKINHISNLLRPRNWVPPFNSTAMIF 1647
Query: 665 SRPH 676
+PH
Sbjct: 1648 GKPH 1651
>SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 610
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 520 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 642
+PS+ S PV S + T++ P P + DT SPTP
Sbjct: 306 TPSRLVSLQNSPVKMMRSTLSAQTLAENPIPESTDTTSPTP 346
>SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1521
Score = 28.7 bits (61), Expect = 6.1
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -3
Query: 598 ETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNMIWVIFSLLALG--LRGASVSRT 425
ETPSP + P PDA TAW + L S + V S G LRGA +
Sbjct: 90 ETPSPALESAPAAMPDA--TDTAWTCLIVTYYLE-SEALHVSASASRSGRRLRGADAGKR 146
Query: 424 G 422
G
Sbjct: 147 G 147
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 544 CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*P 663
CT P ++ P T + T P TK P PS + T P
Sbjct: 150 CTGTPEPTITSKPPVTETTTTKPETKPPKPPAPSTIPTPP 189
>SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59)
Length = 764
Score = 28.3 bits (60), Expect = 8.1
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 476 DPDHV-RNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRH 643
DP HV R +RHVRR PS + VR ++ +RR L R H+R RH
Sbjct: 224 DPRHVKRKTLDSRHVRRKPSDSRHVRRKTLDSRH--VRRNTLDSR-HVRCNTLDSRH 277
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 214 GNTARGASSPAKPALHIPEPLSTT 143
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 214 GNTARGASSPAKPALHIPEPLSTT 143
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_10665| Best HMM Match : PT (HMM E-Value=6.2)
Length = 215
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 599 PHRAHLRRIRTPPR-HPASGLSRSRPHRLPHEDPH 700
PHR H+ RTP R H + PH P +PH
Sbjct: 161 PHRPHMDPTRTPHRPHMDPTRTSHGPHTDPTRNPH 195
>SB_8208| Best HMM Match : ShTK (HMM E-Value=1.2e-21)
Length = 226
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +1
Query: 487 CSKHSTRPPCTSPSKPCSRCTRPVVPPVS--CWTPATVSPTPCPSTKDTHSPT 639
C +H T K C C + PP+ T T +PT P TK T +PT
Sbjct: 167 CRRHKTYMNIYC-RKSCGFCGKAPHPPIQEPPVTKTTTAPTEPPVTKTTTAPT 218
>SB_36012| Best HMM Match : DUF755 (HMM E-Value=0.064)
Length = 265
Score = 28.3 bits (60), Expect = 8.1
Identities = 23/89 (25%), Positives = 32/89 (35%), Gaps = 3/89 (3%)
Frame = +2
Query: 440 GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLR 619
G P ED D + ++ R S + R+++ + R R H R
Sbjct: 82 GGPSRHNNASEDSFDSGEEEKRNKNSARKMSPINGHKSSRKSRHKSDKKERASRKRRHSR 141
Query: 620 RIRTPPRHPASGLS--RSRPHRL-PHEDP 697
P RHP+ S R R RL H P
Sbjct: 142 SESPPVRHPSGSQSGDRQRERRLHKHSSP 170
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,198,809
Number of Sequences: 59808
Number of extensions: 773894
Number of successful extensions: 3166
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 2510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3089
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2335516755
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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