Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0054
(741 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC112107-1|AAI12108.1| 501|Homo sapiens tetratricopeptide repea... 32 1.9
BC105128-1|AAI05129.1| 501|Homo sapiens tetratricopeptide repea... 32 1.9
BC073796-1|AAH73796.1| 384|Homo sapiens TTC19 protein protein. 32 1.9
BC011698-1|AAH11698.2| 382|Homo sapiens TTC19 protein protein. 32 1.9
AK000350-1|BAA91103.1| 273|Homo sapiens protein ( Homo sapiens ... 32 1.9
BC040280-1|AAH40280.1| 413|Homo sapiens CCDC83 protein protein. 31 3.3
AK124113-1|BAC85776.1| 444|Homo sapiens protein ( Homo sapiens ... 31 3.3
BC122550-1|AAI22551.1| 475|Homo sapiens VCP protein protein. 31 4.3
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 31 4.3
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 31 4.3
BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein. 31 4.3
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 31 4.3
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 31 4.3
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 31 4.3
AF313486-1|AAG29874.1| 305|Homo sapiens valosin-containing prot... 31 5.7
>BC112107-1|AAI12108.1| 501|Homo sapiens tetratricopeptide repeat
domain 19 protein.
Length = 501
Score = 32.3 bits (70), Expect = 1.9
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 11/85 (12%)
Frame = +3
Query: 285 GVEQEAKDCIELWLLFKSIEQTSDRQSHVLPVYKTC-----------EQIAKDNIHDYIT 431
G++QE IE+ L SI +RQ + Y+ C +++A+D +
Sbjct: 291 GMKQEDNAIIEISLKLASIYAAQNRQEFAVAGYEFCISTLEEKIEREKELAEDIMSVEEK 350
Query: 432 ANPHLVLGMILLEDSTKLFDIFSKE 506
AN HL+LGM L D+ + +FSK+
Sbjct: 351 ANTHLLLGMCL--DACARYLLFSKQ 373
>BC105128-1|AAI05129.1| 501|Homo sapiens tetratricopeptide repeat
domain 19 protein.
Length = 501
Score = 32.3 bits (70), Expect = 1.9
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 11/85 (12%)
Frame = +3
Query: 285 GVEQEAKDCIELWLLFKSIEQTSDRQSHVLPVYKTC-----------EQIAKDNIHDYIT 431
G++QE IE+ L SI +RQ + Y+ C +++A+D +
Sbjct: 291 GMKQEDNAIIEISLKLASIYAAQNRQEFAVAGYEFCISTLEEKIEREKELAEDIMSVEEK 350
Query: 432 ANPHLVLGMILLEDSTKLFDIFSKE 506
AN HL+LGM L D+ + +FSK+
Sbjct: 351 ANTHLLLGMCL--DACARYLLFSKQ 373
>BC073796-1|AAH73796.1| 384|Homo sapiens TTC19 protein protein.
Length = 384
Score = 32.3 bits (70), Expect = 1.9
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 11/85 (12%)
Frame = +3
Query: 285 GVEQEAKDCIELWLLFKSIEQTSDRQSHVLPVYKTC-----------EQIAKDNIHDYIT 431
G++QE IE+ L SI +RQ + Y+ C +++A+D +
Sbjct: 174 GMKQEDNAIIEISLKLASIYAAQNRQEFAVAGYEFCISTLEEKIEREKELAEDIMSVEEK 233
Query: 432 ANPHLVLGMILLEDSTKLFDIFSKE 506
AN HL+LGM L D+ + +FSK+
Sbjct: 234 ANTHLLLGMCL--DACARYLLFSKQ 256
>BC011698-1|AAH11698.2| 382|Homo sapiens TTC19 protein protein.
Length = 382
Score = 32.3 bits (70), Expect = 1.9
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 11/85 (12%)
Frame = +3
Query: 285 GVEQEAKDCIELWLLFKSIEQTSDRQSHVLPVYKTC-----------EQIAKDNIHDYIT 431
G++QE IE+ L SI +RQ + Y+ C +++A+D +
Sbjct: 172 GMKQEDNAIIEISLKLASIYAAQNRQEFAVAGYEFCISTLEEKIEREKELAEDIMSVEEK 231
Query: 432 ANPHLVLGMILLEDSTKLFDIFSKE 506
AN HL+LGM L D+ + +FSK+
Sbjct: 232 ANTHLLLGMCL--DACARYLLFSKQ 254
>AK000350-1|BAA91103.1| 273|Homo sapiens protein ( Homo sapiens
cDNA FLJ20343 fis, clone HEP13649. ).
Length = 273
Score = 32.3 bits (70), Expect = 1.9
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 11/85 (12%)
Frame = +3
Query: 285 GVEQEAKDCIELWLLFKSIEQTSDRQSHVLPVYKTC-----------EQIAKDNIHDYIT 431
G++QE IE+ L SI +RQ + Y+ C +++A+D +
Sbjct: 63 GMKQEDNAIIEISLKLASIYAAQNRQEFAVAGYEFCISTLEEKIEREKELAEDIMSVEEK 122
Query: 432 ANPHLVLGMILLEDSTKLFDIFSKE 506
AN HL+LGM L D+ + +FSK+
Sbjct: 123 ANTHLLLGMCL--DACARYLLFSKQ 145
>BC040280-1|AAH40280.1| 413|Homo sapiens CCDC83 protein protein.
Length = 413
Score = 31.5 bits (68), Expect = 3.3
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 480 KLFDIFSKEDYLHFTDFVLPNKIYKD-KLPHLHSVYK 587
KL + SK+ +HF + +P K+YKD + P H YK
Sbjct: 371 KLMSVESKKMPIHFQEKEIPVKLYKDVRSPESHITYK 407
>AK124113-1|BAC85776.1| 444|Homo sapiens protein ( Homo sapiens
cDNA FLJ42119 fis, clone TESTI2005739, weakly similar
to Drosophila melanogaster Rho-kinase (Rhk) mRNA. ).
Length = 444
Score = 31.5 bits (68), Expect = 3.3
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 480 KLFDIFSKEDYLHFTDFVLPNKIYKD-KLPHLHSVYK 587
KL + SK+ +HF + +P K+YKD + P H YK
Sbjct: 402 KLMSVESKKMPIHFQEKEIPVKLYKDVRSPESHITYK 438
>BC122550-1|AAI22551.1| 475|Homo sapiens VCP protein protein.
Length = 475
Score = 31.1 bits (67), Expect = 4.3
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +3
Query: 42 YDTLCSYGIVNDDERDDLYQIISRLAHTQNLKLVDDIFTESCSTITKQHFYVQLAKYCVK 221
+D GI + R ++ QI HT+N+KL DD+ E + T H LA C +
Sbjct: 32 FDREVDIGIPDATGRLEILQI-----HTKNMKLADDVDLEQVANETHGHVGADLAALCSE 86
Query: 222 NKLYKV 239
L +
Sbjct: 87 AALQAI 92
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 31.1 bits (67), Expect = 4.3
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +3
Query: 42 YDTLCSYGIVNDDERDDLYQIISRLAHTQNLKLVDDIFTESCSTITKQHFYVQLAKYCVK 221
+D GI + R ++ QI HT+N+KL DD+ E + T H LA C +
Sbjct: 363 FDREVDIGIPDATGRLEILQI-----HTKNMKLADDVDLEQVANETHGHVGADLAALCSE 417
Query: 222 NKLYKV 239
L +
Sbjct: 418 AALQAI 423
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 31.1 bits (67), Expect = 4.3
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +3
Query: 42 YDTLCSYGIVNDDERDDLYQIISRLAHTQNLKLVDDIFTESCSTITKQHFYVQLAKYCVK 221
+D GI + R ++ QI HT+N+KL DD+ E + T H LA C +
Sbjct: 363 FDREVDIGIPDATGRLEILQI-----HTKNMKLADDVDLEQVANETHGHVGADLAALCSE 417
Query: 222 NKLYKV 239
L +
Sbjct: 418 AALQAI 423
>BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein.
Length = 644
Score = 31.1 bits (67), Expect = 4.3
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +3
Query: 42 YDTLCSYGIVNDDERDDLYQIISRLAHTQNLKLVDDIFTESCSTITKQHFYVQLAKYCVK 221
+D GI + R ++ QI HT+N+KL DD+ E + T H LA C +
Sbjct: 201 FDREVDIGIPDATGRLEILQI-----HTKNMKLADDVDLEQVANETHGHVGADLAALCSE 255
Query: 222 NKLYKV 239
L +
Sbjct: 256 AALQAI 261
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 31.1 bits (67), Expect = 4.3
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +3
Query: 42 YDTLCSYGIVNDDERDDLYQIISRLAHTQNLKLVDDIFTESCSTITKQHFYVQLAKYCVK 221
+D GI + R ++ QI HT+N+KL DD+ E + T H LA C +
Sbjct: 363 FDREVDIGIPDATGRLEILQI-----HTKNMKLADDVDLEQVANETHGHVGADLAALCSE 417
Query: 222 NKLYKV 239
L +
Sbjct: 418 AALQAI 423
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 31.1 bits (67), Expect = 4.3
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +3
Query: 42 YDTLCSYGIVNDDERDDLYQIISRLAHTQNLKLVDDIFTESCSTITKQHFYVQLAKYCVK 221
+D GI + R ++ QI HT+N+KL DD+ E + T H LA C +
Sbjct: 363 FDREVDIGIPDATGRLEILQI-----HTKNMKLADDVDLEQVANETHGHVGADLAALCSE 417
Query: 222 NKLYKV 239
L +
Sbjct: 418 AALQAI 423
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 31.1 bits (67), Expect = 4.3
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +3
Query: 42 YDTLCSYGIVNDDERDDLYQIISRLAHTQNLKLVDDIFTESCSTITKQHFYVQLAKYCVK 221
+D GI + R ++ QI HT+N+KL DD+ E + T H LA C +
Sbjct: 363 FDREVDIGIPDATGRLEILQI-----HTKNMKLADDVDLEQVANETHGHVGADLAALCSE 417
Query: 222 NKLYKV 239
L +
Sbjct: 418 AALQAI 423
>AF313486-1|AAG29874.1| 305|Homo sapiens valosin-containing protein
protein.
Length = 305
Score = 30.7 bits (66), Expect = 5.7
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 120 HTQNLKLVDDIFTESCSTITKQHFYVQLAKYCVKNKLYKV 239
HT+N+KL DD+ E + T H LA C + L +
Sbjct: 12 HTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAI 51
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,126,174
Number of Sequences: 237096
Number of extensions: 2393941
Number of successful extensions: 4453
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4453
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -