Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0054
         (741 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    26   0.43 
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    24   1.7  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   4.0  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   4.0  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    22   5.3  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    21   9.2  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    21   9.2  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   9.2  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   9.2  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 25.8 bits (54), Expect = 0.43
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
 Frame = -1

Query: 657 CIRTVD----GTHSHLLNHTFDSNLSIF 586
           C  TVD    G  SH +NH+ D NL+++
Sbjct: 562 CPYTVDAAIYGNISHFINHSCDPNLAVY 589


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 160 NLVLP*LNNIFMYSWQSIV*RINCIKY 240
           N ++P +   + Y WQ I+ R   +KY
Sbjct: 77  NTLIPFMQQNYPYEWQLILRRYKIMKY 103


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 676 KYLNSN*LTRPQTISLLINL 735
           KY N N + RP  I++L+ L
Sbjct: 258 KYRNDNNIVRPDFINMLMEL 277


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 108 K*FDTNHLVRHHLQYHKNKVYHKCT 34
           K F  NH+++ H   H  +  +KCT
Sbjct: 239 KSFGYNHVLKLHQVAHYGEKVYKCT 263


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
          protein.
          Length = 69

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -1

Query: 81 RHHLQYHKNKVYHKCTF*CKR 19
          +HHL+YH    +    F C++
Sbjct: 1  KHHLEYHLRNHFGSKPFKCEK 21


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = +3

Query: 612 YDSKDVNVYHLLSGYRGLDVSKIFEFQLINQTTNN 716
           Y   DV +Y   +  RG++ +++ +F +I   TN+
Sbjct: 184 YTVLDVVMYWKETPVRGVEEAELPQFTIIGYETND 218


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = +3

Query: 555 DKLPHLHSVYKKYSDLNQMYDSKDVNVYHLLSGYRGLDVSKIFEFQLINQT 707
           D L  +  V K    ++ + ++  +N+   L     LD  KIF+  L+  T
Sbjct: 70  DILKVIEWVEKNLGAIDILINNATINIDVTLQNDEVLDWKKIFDINLLGLT 120


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 315 LYNPLLPAPHRTSPC 271
           +YNP  P P+  S C
Sbjct: 56  IYNPRYPLPYSGSKC 70


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/21 (28%), Positives = 16/21 (76%)
 Frame = -3

Query: 556 SLYILFGKTKSVKCK*SSLEN 494
           +L++L G+T+++ C+   L++
Sbjct: 866 ALFVLNGETRTINCEIGGLQH 886


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,024
Number of Sequences: 438
Number of extensions: 4862
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)