Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0052
         (606 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     26   0.82 
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           24   3.3  
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    23   5.8  
AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical prote...    23   7.7  

>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 26.2 bits (55), Expect = 0.82
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = -1

Query: 480 FGGWEHVDRGTGAQCFCQNDGIFGLRLWSVEDQLSG--VPHGVRVPAQSDARVESVEEVI 307
           F GW+  D G     +  ND  +   LW  +D  +G  VP  V + A  +A  E+V EV 
Sbjct: 613 FYGWDCSDDGWPQGFWNDNDNNWLRGLWDNDDAEAGAAVPEAV-LDAIPEAMPEAVPEVS 671

Query: 306 S 304
           S
Sbjct: 672 S 672


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
 Frame = +1

Query: 205 PFR-PFKSSEEYLYAMKEDLAEWLTVLYPELRITADNFLDRLDTGV 339
           PF  P  SSEE      +    W  V  PELR+ A    ++   G+
Sbjct: 455 PFNWPSISSEEEQEQPADQQTPWTQVTIPELRLIASTMPNKKAPGL 500


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 290 NSGSPLITSSTDSTRASLC 346
           NSGSPL + S+ S  +S C
Sbjct: 36  NSGSPLSSISSSSRNSSSC 54


>AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical protein
           protein.
          Length = 226

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +3

Query: 369 GLR*VDPRRSTTGGRRCHHSGKSTALPSPGQHAPSRQS 482
           GL    P RSTT       SG S++ P P     S+ S
Sbjct: 118 GLDRSHPNRSTTASSEQACSGSSSSSPEPNLDCLSKCS 155


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,445
Number of Sequences: 2352
Number of extensions: 11928
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)