Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0049
(691 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38; Eukaryo... 409 e-113
UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform; n=... 393 e-108
UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein... 197 e-102
UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55; Eukar... 355 6e-97
UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2; E... 321 1e-86
UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S riboso... 217 2e-82
UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S riboso... 287 2e-76
UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n... 282 5e-75
UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillard... 281 9e-75
UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing ... 257 2e-67
UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9; Eukaryot... 255 6e-67
UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1; Encephal... 174 2e-42
UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4; Desulfu... 141 1e-32
UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1; Methano... 130 4e-29
UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12; Euryar... 128 1e-28
UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2; Methanobact... 123 5e-27
UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1; Th... 120 3e-26
UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3; Thermop... 120 4e-26
UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga ... 117 3e-25
UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4; Pyrobac... 111 1e-23
UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4; Euryarc... 111 1e-23
UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3; Me... 111 2e-23
UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2; Bigelowi... 111 2e-23
UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2; Euryarc... 108 1e-22
UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_030011... 105 1e-21
UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5; Sulfolo... 105 1e-21
UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1; Methanococc... 103 3e-21
UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmenta... 102 7e-21
UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1; Picroph... 97 5e-19
UniRef50_P62429 Cluster: 30S ribosomal protein S4e; n=1; Nanoarc... 97 5e-19
UniRef50_A2SPL4 Cluster: Ribosomal protein S4E, central; n=1; Me... 93 6e-18
UniRef50_P22510 Cluster: 30S ribosomal protein S4E; n=6; Halobac... 85 1e-15
UniRef50_A0RVY5 Cluster: Ribosomal protein S4E; n=2; Thermoprote... 81 3e-14
UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n... 81 3e-14
UniRef50_A5BV74 Cluster: Putative uncharacterized protein; n=1; ... 44 0.003
UniRef50_A0BHK0 Cluster: Chromosome undetermined scaffold_108, w... 40 0.043
UniRef50_UPI000038E364 Cluster: hypothetical protein Faci_030005... 38 0.31
UniRef50_A5BNN8 Cluster: Putative uncharacterized protein; n=1; ... 35 2.2
UniRef50_UPI0000E814A8 Cluster: PREDICTED: similar to MEGF6; n=1... 34 2.9
UniRef50_A6GEF6 Cluster: Hydrolase, alpha/beta fold family prote... 34 3.8
UniRef50_UPI0000D5573E Cluster: PREDICTED: similar to Tyrosine-p... 33 6.6
UniRef50_A0YER0 Cluster: Putative uncharacterized protein; n=1; ... 33 6.6
UniRef50_Q5UP36 Cluster: Cysteinyl-tRNA synthetase; n=1; Acantha... 33 8.7
>UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38;
Eukaryota|Rep: 40S ribosomal protein S4 - Drosophila
melanogaster (Fruit fly)
Length = 261
Score = 409 bits (1008), Expect = e-113
Identities = 187/230 (81%), Positives = 206/230 (89%)
Frame = +1
Query: 1 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 180
KRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV KIV QRL
Sbjct: 10 KRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRL 69
Query: 181 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 360
+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+
Sbjct: 70 VKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKT 129
Query: 361 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 540
G K VP+LVTHDGRTIRYPDPLI NDS+Q+DIA+ KI D+IKF+SGNLCMITGGRNL
Sbjct: 130 QLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNL 189
Query: 541 GRVGTIVSRERHPGSFDIVHIKDSTGHTFSTRLNNVFIIGKGTKAYISLP 690
GRVGT+V+RERHPGSFDIVHIKDS GH F+TRL NVFIIGKG K YISLP
Sbjct: 190 GRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLP 239
>UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform;
n=137; Eukaryota|Rep: 40S ribosomal protein S4, X
isoform - Homo sapiens (Human)
Length = 263
Score = 393 bits (967), Expect = e-108
Identities = 173/230 (75%), Positives = 204/230 (88%)
Frame = +1
Query: 1 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 180
KR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR
Sbjct: 10 KRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRF 69
Query: 181 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 360
IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++
Sbjct: 70 IKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKI 129
Query: 361 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 540
G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NL
Sbjct: 130 FVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANL 189
Query: 541 GRVGTIVSRERHPGSFDIVHIKDSTGHTFSTRLNNVFIIGKGTKAYISLP 690
GR+G I +RERHPGSFD+VH+KD+ G++F+TRL+N+F+IGKG K +ISLP
Sbjct: 190 GRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLP 239
>UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein
S4, X isoform (LOC126235), mRNA; n=1; Takifugu
rubripes|Rep: similar to 40S ribosomal protein S4, X
isoform (LOC126235), mRNA - Takifugu rubripes
Length = 291
Score = 197 bits (481), Expect(2) = e-102
Identities = 91/111 (81%), Positives = 99/111 (89%)
Frame = +1
Query: 1 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 180
KR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR
Sbjct: 10 KRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRF 69
Query: 181 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 333
IK+DGKVRTD TYP GFMDV+SI+KT E FRLIYDVKGRFT+HRIT EEAK
Sbjct: 70 IKIDGKVRTDITYPTGFMDVISIDKTGEHFRLIYDVKGRFTVHRITAEEAK 120
Score = 197 bits (480), Expect(2) = e-102
Identities = 80/120 (66%), Positives = 106/120 (88%)
Frame = +1
Query: 331 KYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGN 510
+YKLCKVK++ G K +P+LVTHD RTIRYPDPLIKVND++++D+ T KI DFIKF++ N
Sbjct: 152 QYKLCKVKKILIGTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLDTGKITDFIKFDTSN 211
Query: 511 LCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFSTRLNNVFIIGKGTKAYISLP 690
+CM+TGG NLGR+G I +RERHPGSFD+VH+KDSTG++F+TRL+N+F+IGKG K ++SLP
Sbjct: 212 MCMVTGGANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLP 271
>UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55;
Eukaryota|Rep: 40S ribosomal protein S4-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 262
Score = 355 bits (873), Expect = 6e-97
Identities = 160/230 (69%), Positives = 192/230 (83%)
Frame = +1
Query: 1 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 180
KRLNAPK WMLDKLGG +AP+PS+GPHK RECLPLV+ +RNRLKYALT EV+ I+ QR
Sbjct: 10 KRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRH 69
Query: 181 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 360
I+VDGKVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H I EEAK+KLCKV+ +
Sbjct: 70 IQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSI 129
Query: 361 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 540
G K +PYL T+DGRTIRYPDPLIK ND+I+LD+ KI++FIKF+ GN+ M+TGGRN
Sbjct: 130 QFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNR 189
Query: 541 GRVGTIVSRERHPGSFDIVHIKDSTGHTFSTRLNNVFIIGKGTKAYISLP 690
GRVG I +RE+H GSF+ +HI+DSTGH F+TRL NV+ IGKGTK ++SLP
Sbjct: 190 GRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLP 239
>UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S4 - Entamoeba histolytica HM-1:IMSS
Length = 326
Score = 321 bits (788), Expect = 1e-86
Identities = 141/230 (61%), Positives = 181/230 (78%)
Frame = +1
Query: 1 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 180
KRLNAP WML KLGG +AP+PS GPH ++ECLPL++ LRNRL YAL G EV IVK R
Sbjct: 10 KRLNAPHHWMLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNRT 69
Query: 181 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 360
IK+DGK+RTD YP GFMDV+SI +T E FRL+Y+ K RF + +T E+AK+KLCK+++
Sbjct: 70 IKIDGKIRTDTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKFKLCKIEKR 129
Query: 361 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 540
G +PY+VTHDGRTIRYP P ++ ND+I+L++ T KI+DF+KF+ GN M+ GG +
Sbjct: 130 VLGTGAIPYIVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGNGM 189
Query: 541 GRVGTIVSRERHPGSFDIVHIKDSTGHTFSTRLNNVFIIGKGTKAYISLP 690
GRVG IV RE HPGSF+IVHIKD+ G+TF+TRLNNVF+IGKGT+ ++LP
Sbjct: 190 GRVGVIVKREVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLP 239
>UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=3; Eutheria|Rep: PREDICTED:
similar to 40S ribosomal protein S4, X isoform - Canis
familiaris
Length = 240
Score = 217 bits (530), Expect(2) = 2e-82
Identities = 91/136 (66%), Positives = 116/136 (85%)
Frame = +1
Query: 283 DVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLD 462
D KGRF +HRITPEEAKYKL KV+++ G K +P+LVTHD RTIRYPDPLIK+ND+IQ+D
Sbjct: 76 DTKGRFAVHRITPEEAKYKLGKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKMNDTIQID 135
Query: 463 IATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFSTRLN 642
+ T KI DF KF++GNLCM+TGG NLGR+G I +RE HPGSFD+VH+KD+ G++F+TRL+
Sbjct: 136 LETGKITDFFKFDTGNLCMVTGGTNLGRIGVITNRENHPGSFDVVHVKDANGNSFATRLS 195
Query: 643 NVFIIGKGTKAYISLP 690
N+F+IGKG +ISLP
Sbjct: 196 NIFVIGKGNIPWISLP 211
Score = 111 bits (268), Expect(2) = 2e-82
Identities = 51/66 (77%), Positives = 56/66 (84%)
Frame = +1
Query: 1 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 180
K + APK WMLDKL GV+AP PSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI Q
Sbjct: 10 KHVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKIRMQHF 69
Query: 181 IKVDGK 198
IK+DGK
Sbjct: 70 IKMDGK 75
>UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=1; Macaca mulatta|Rep:
PREDICTED: similar to 40S ribosomal protein S4, X
isoform - Macaca mulatta
Length = 244
Score = 287 bits (703), Expect = 2e-76
Identities = 138/230 (60%), Positives = 172/230 (74%)
Frame = +1
Query: 1 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 180
KR+ A + WMLDKL GV+A RPSTGPHKLRECLP IFLRNRLKYALTG+EV KI Q
Sbjct: 21 KRVAALQHWMLDKLTGVFAARPSTGPHKLRECLPH-IFLRNRLKYALTGDEVKKICMQWF 79
Query: 181 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 360
IKVDGK+RTD P MDV+SI+K E F LIY + RF +HRITPEE KYKLCK++++
Sbjct: 80 IKVDGKIRTDNNLPYWIMDVISIDKMGEDFCLIYGINRRFALHRITPEEVKYKLCKMRKI 139
Query: 361 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 540
K +P+LV HD T+R+PD LIKVND+IQ+D+ T KI +KF++GNLC++TGG N
Sbjct: 140 FVRAKGIPHLVIHDIHTVRHPDSLIKVNDTIQIDLETGKI-TALKFDTGNLCLVTGGGNW 198
Query: 541 GRVGTIVSRERHPGSFDIVHIKDSTGHTFSTRLNNVFIIGKGTKAYISLP 690
GR+G I +RERHP SFD H+KD+ ++FS +F+I KG K +ISLP
Sbjct: 199 GRIGVITNRERHPVSFDTFHVKDANSNSFSI----IFVIDKGNKPWISLP 244
>UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n=4;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein
S4-C, putative - Trichomonas vaginalis G3
Length = 269
Score = 282 bits (692), Expect = 5e-75
Identities = 128/230 (55%), Positives = 170/230 (73%)
Frame = +1
Query: 1 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 180
KRL AP W+L K G +A PSTGPHKLRECLP+ IFLR+RLKYALT E + IVK+RL
Sbjct: 24 KRLTAPHHWLLAKSAGKFASHPSTGPHKLRECLPINIFLRDRLKYALTAKEAVAIVKRRL 83
Query: 181 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 360
+KVDGKVRT+ YP G MDV+ + K+NELFR+IYD KGRF +H I +EA +KL +V +
Sbjct: 84 VKVDGKVRTNYRYPTGLMDVIELGKSNELFRIIYDCKGRFCVHHIEAKEASFKLLRVNQF 143
Query: 361 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 540
G K +P++VTHDGRTI Y DP ++V+D+++ +I T ++ IKF+ G++ M+T G N+
Sbjct: 144 KIGAKGIPHVVTHDGRTISYVDPSVRVHDALKFNIKTGEVESVIKFKVGDVAMVTAGGNV 203
Query: 541 GRVGTIVSRERHPGSFDIVHIKDSTGHTFSTRLNNVFIIGKGTKAYISLP 690
GRVGTI E+ SFDIVH+KD++G F+TR+ NVF+IG+ ISLP
Sbjct: 204 GRVGTIQKIEKQMASFDIVHLKDTSGAVFATRIMNVFVIGENEHPLISLP 253
>UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillardia
theta|Rep: 40S ribosomal protein S4 - Guillardia theta
(Cryptomonas phi)
Length = 257
Score = 281 bits (690), Expect = 9e-75
Identities = 128/230 (55%), Positives = 172/230 (74%)
Frame = +1
Query: 1 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 180
KRLNAPK W+L+KLGG++APR S+GPHK + +PLVI +RN+LKY+ E L I+K+
Sbjct: 10 KRLNAPKKWLLNKLGGIWAPRSSSGPHKKQNSIPLVIVIRNKLKYSTNQRESLNILKKNE 69
Query: 181 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 360
I VDGKVR D +PAG MDV+SI+ T E +R++YD G F +HRIT +E+ +KLCKV RV
Sbjct: 70 IYVDGKVRADKNFPAGVMDVISIKTTKENYRVLYDNVGHFFLHRITIKESMFKLCKVIRV 129
Query: 361 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 540
+ G K +PY+VTHDGRTIR+P+ LIK NDSI LD+ K++DFIKF G+LC++ G N+
Sbjct: 130 SIGSKGIPYIVTHDGRTIRFPNLLIKSNDSIVLDLLNNKVIDFIKFSIGSLCVVIKGSNI 189
Query: 541 GRVGTIVSRERHPGSFDIVHIKDSTGHTFSTRLNNVFIIGKGTKAYISLP 690
GR+G ++ GS IV +KD G +FST+ N+F+IGKGTK++ISLP
Sbjct: 190 GRIGVFINTIGGQGSDSIVCLKDFNGSSFSTQTKNLFVIGKGTKSFISLP 239
>UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal family S4e containing protein - Tetrahymena
thermophila SB210
Length = 370
Score = 257 bits (630), Expect = 2e-67
Identities = 117/214 (54%), Positives = 154/214 (71%), Gaps = 2/214 (0%)
Frame = +1
Query: 55 APRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV--KQRLIKVDGKVRTDPTYPAG 228
A RPS GPHKLRE LPL + L+ RL YAL G +V I+ K++ + VDGKVR D YP G
Sbjct: 138 ATRPSQGPHKLRESLPLSVLLKERLNYALNGRDVTLILNDKEQNVFVDGKVRRDKGYPTG 197
Query: 229 FMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGR 408
MDVV IEKT++ FR++YD KGRF + ++ EEAKYKL KV A GP +PY+VTHD R
Sbjct: 198 LMDVVRIEKTDQSFRILYDTKGRFVLKSLSKEEAKYKLLKVTAKAIGPNQIPYIVTHDSR 257
Query: 409 TIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSF 588
TIR+P+P IK+ D+++ D+ KI +F ESGN+C I G N+GRVG I E+H GSF
Sbjct: 258 TIRFPNPEIKIGDTLKYDLVNNKIENFAHLESGNVCYIQQGNNIGRVGIIQHIEKHQGSF 317
Query: 589 DIVHIKDSTGHTFSTRLNNVFIIGKGTKAYISLP 690
DI H+KD+ G+ F+TRL N+F++G+G K++I LP
Sbjct: 318 DICHVKDAKGNAFATRLGNIFVLGQGKKSWIELP 351
>UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9;
Eukaryota|Rep: 40S ribosomal protein S4 - Leishmania
major
Length = 273
Score = 255 bits (625), Expect = 6e-67
Identities = 120/221 (54%), Positives = 150/221 (67%)
Frame = +1
Query: 1 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 180
KRL APK WML KL GV+APRP GPHKLRECLPL++ +RNRLKYAL E I++Q L
Sbjct: 7 KRLYAPKDWMLSKLTGVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMILRQGL 66
Query: 181 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 360
+ VD R D YPAGFMDVV I KT + FRL+YDVKGRF + ++ EA+ KL KV +
Sbjct: 67 VHVDNHPRRDGKYPAGFMDVVEIPKTGDRFRLMYDVKGRFALVNLSEAEAQIKLMKVVNL 126
Query: 361 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 540
T VP VTHDG IRYPDP + D+I ++ K +D IK G ++TGG N
Sbjct: 127 YTATGRVPVAVTHDGHRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQGKAVIVTGGANR 186
Query: 541 GRVGTIVSRERHPGSFDIVHIKDSTGHTFSTRLNNVFIIGK 663
GR+G IV E HPG+F+I H+KD++G F+TR N+F+IGK
Sbjct: 187 GRIGEIVKVECHPGAFNIAHLKDASGAEFATRAANIFVIGK 227
>UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S4 -
Encephalitozoon cuniculi
Length = 268
Score = 174 bits (423), Expect = 2e-42
Identities = 89/231 (38%), Positives = 144/231 (62%), Gaps = 1/231 (0%)
Frame = +1
Query: 1 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 180
KR APK+WMLDK GG +A P++GPHK EC+PL + L+YA E+ I+ ++
Sbjct: 10 KRKTAPKSWMLDKQGGTFALMPASGPHKKTECIPLGYLISRFLRYASNFKELSIILAEKN 69
Query: 181 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 360
IKV+G+VRT+ +P G DVVSIEKT E FR++Y+V +F +HRI+ EEA Y+L KV +
Sbjct: 70 IKVNGRVRTNSHFPVGLFDVVSIEKTGEHFRVLYNVHKKFHLHRISSEEASYRLTKVTKK 129
Query: 361 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 540
+ +PY+V+ G +IR+ DP I + +I++ T+K++++I + ++ G+
Sbjct: 130 YEN-QGIPYIVSSCGLSIRFCDPAIDLGYTIKISNETSKVIEYIVPGPDKVIFVSRGKAR 188
Query: 541 GRVGTIVSRERHPGSFDIVHIKDSTGHTFSTRLNNVFIIGKGTK-AYISLP 690
GRVG +++ G + + D G+TFS + +IG+ ++ +I+LP
Sbjct: 189 GRVG-VINTISTQGKETVYGMTDFAGNTFSCTSKSCILIGESSENIWITLP 238
>UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4;
Desulfurococcales|Rep: 30S ribosomal protein S4e -
Aeropyrum pernix
Length = 253
Score = 141 bits (342), Expect = 1e-32
Identities = 87/240 (36%), Positives = 131/240 (54%), Gaps = 10/240 (4%)
Frame = +1
Query: 1 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 180
K L AP+ W + + +A +P GPH + LPL++ +RN L YA T E K++ +
Sbjct: 11 KALAAPRFWPILRKEYKWAVKPRPGPHPAEKSLPLLLIVRNVLGYAQTAREARKLISEGH 70
Query: 181 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLI-YDVKGRFTIHRITPEEAKYKLCKVKR 357
+VDG VR D +P GFMDV+ + T E FR++ Y VK F +H I EE K +++
Sbjct: 71 FRVDGVVRKDYKFPVGFMDVIEVVDTGEKFRMLPYPVK-FFKLHPIPEEEGDLKPVRIEN 129
Query: 358 VATGPKNVPYLVTHDGRTI--RYPDP------LIKVNDSIQLDIATTKIMDFIKFESGNL 513
T L HDGR I R DP + + D++ + + +I IKF G +
Sbjct: 130 KTTVKGGHVQLNLHDGRNILVRVKDPRNPVEDVYRTMDTLLITVPGQEIKGHIKFGEGAI 189
Query: 514 CMITGGRNLGRVGTIVSRERHPG-SFDIVHIKDSTGHTFSTRLNNVFIIGKGTKAYISLP 690
+I GGRN+GRVG + S ++ G +V ++D++G+ F T L+ VF+IG + ISLP
Sbjct: 190 AIIVGGRNVGRVGVVKSVQKGWGRKRTLVTLEDASGNLFQTSLDYVFVIGL-DRPVISLP 248
>UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S4e -
Methanopyrus kandleri
Length = 260
Score = 130 bits (313), Expect = 4e-29
Identities = 80/237 (33%), Positives = 122/237 (51%), Gaps = 16/237 (6%)
Frame = +1
Query: 1 KRLNAPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 177
KRL AP AW + K GG +APRP GPH + +PL+I +R+ L YA E KI+ +
Sbjct: 13 KRLAAPYAWPIPRKEGGKFAPRPYPGPHTMDTSVPLLILVRDMLGYADYAREARKIITRG 72
Query: 178 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 357
I VDG VR +P +P G MDVV I +T + +R++ + R + I+ EEA+ K+C++K
Sbjct: 73 EIYVDGVVRKEPKFPVGIMDVVEIPRTGDRYRVVMNEHHRLDVVPISEEEARVKVCRIKN 132
Query: 358 VATGPKNVPYLVTHDGRT--IRYPDP------LIKVNDSIQLDI------ATTKIMDFIK 495
+ HDG+ + DP + V DS+ L++ + K++D I
Sbjct: 133 KTYVRGGNLQITMHDGKNWLVEIEDPTDPKEDVYSVGDSLVLELPEPDSGESWKVVDHIP 192
Query: 496 FESGNLCMITGGRNLGRVGTIVSRERHPG-SFDIVHIKDSTGHTFSTRLNNVFIIGK 663
FE G GR+ G VG +V + G D++ +++ G F T + IGK
Sbjct: 193 FEEGVWVYAMTGRHSGEVGRVVEIQTFEGPQEDLITVENPEGDQFQTTKGRLIAIGK 249
>UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S4e -
Methanococcus maripaludis
Length = 244
Score = 128 bits (309), Expect = 1e-28
Identities = 79/231 (34%), Positives = 120/231 (51%), Gaps = 10/231 (4%)
Frame = +1
Query: 1 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 180
KRL AP W L + + RPS GPH + + LPL++ +R+ LKYA E KI++
Sbjct: 11 KRLAAPANWQLPRKVKTFTVRPSPGPHSMDKSLPLLLVVRDVLKYADNAREAKKIIQTGK 70
Query: 181 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV--K 354
I +DG R + +PAG MDV+SI + +E + +++D GR ++ + ++ KLCK+ K
Sbjct: 71 ILIDGLKRKEYKHPAGLMDVLSIPEMDETYLVLFDESGRISLKK--TDKTDVKLCKIVNK 128
Query: 355 RVATGPKNVPYLVTHDGR--------TIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGN 510
V G N+ L HDGR + + + K DS+ + I I + F G
Sbjct: 129 TVVKG-GNI-QLNLHDGRNQIVKVSDAAKAEEDVYKTGDSVLISIPEQSIAGHVAFGEGK 186
Query: 511 LCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFSTRLNNVFIIGK 663
L ITGG+++G IV E DIV +++ G F T VFI+G+
Sbjct: 187 LAYITGGKHVGEFAKIVEVENRALYSDIVTLENKDGEKFKTVKPYVFIVGQ 237
>UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2;
Methanobacteriaceae|Rep: Ribosomal protein S4e -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 242
Score = 123 bits (296), Expect = 5e-27
Identities = 73/233 (31%), Positives = 119/233 (51%), Gaps = 4/233 (1%)
Frame = +1
Query: 1 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 180
K APK W + + +PS G H + L L + +R+ LK A E +I+
Sbjct: 11 KTYKAPKTWPIHPKEDTWTVKPSAGSHSIENSLSLTLVIRDILKLADNSREAKRIINSGN 70
Query: 181 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 360
+ VDG+V D +P GFMD++ I KT E++R++ D KGR +++I EE KLCK+
Sbjct: 71 VLVDGRVIKDYKFPVGFMDIIEIPKTGEVYRVLLDKKGRLQLNKI--EENDSKLCKIVNK 128
Query: 361 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 540
+T + HDG+ + + V D I L + +I + + + G +ITGG++
Sbjct: 129 STIKGGKIQVNLHDGKNVIIDENDYNVGDVIDLKVPDHEINEVFELKEGACVLITGGKHT 188
Query: 541 GRVGT----IVSRERHPGSFDIVHIKDSTGHTFSTRLNNVFIIGKGTKAYISL 687
G +GT IV+ +P + + I++S F T + F++G+ A ISL
Sbjct: 189 GELGTVSEIIVNESSNPNT---IIIENSAKDEFLTLKDYAFVVGEDAPA-ISL 237
>UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1;
Thermofilum pendens Hrk 5|Rep: Ribosomal protein S4E,
central - Thermofilum pendens (strain Hrk 5)
Length = 251
Score = 120 bits (290), Expect = 3e-26
Identities = 74/230 (32%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Frame = +1
Query: 1 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 180
+R AP W + + V+ +PS GPH L +P+ I LR+ YA T E +I+ R+
Sbjct: 13 RRSVAPPFWPIKRKEYVWTVKPSPGPHSLLSSIPIGIVLRDVFGYAKTMKEARRILASRV 72
Query: 181 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 360
I+VDG+V TD +P G MDV+ I + +R++ D + I PEEA YKL +++R
Sbjct: 73 IEVDGRVVTDYKFPVGLMDVLHIIPEEKYYRVVPDPARKLRFVEIKPEEAGYKLAQIRRK 132
Query: 361 ATGPKNVPYLVTHDGRTI-------RYPDPL-IKVNDSIQLDIATTKIMDFIKFESGNLC 516
T HDGR + Y + K D++ + I I+ + FE G L
Sbjct: 133 MTVKNGDLQFTLHDGRNVLIRKGSEAYSTAISYKTYDALLITIPRQSIVSHVPFEVGTLA 192
Query: 517 MITGGRNLGRVGTI-VSRERHPGSFDIVHIKDSTGHTFSTRLNNVFIIGK 663
++ GRN+G +G I ++ S +V ++D++G T L V +GK
Sbjct: 193 IVVDGRNVGFMGRINAIQQVFKRSRALVELEDASGAKSRTILQYVLPVGK 242
>UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3;
Thermoplasma|Rep: 30S ribosomal protein S4e -
Thermoplasma acidophilum
Length = 235
Score = 120 bits (288), Expect = 4e-26
Identities = 74/231 (32%), Positives = 116/231 (50%), Gaps = 1/231 (0%)
Frame = +1
Query: 1 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 180
KRL + + + + P P+ G H + + L+ +R+ LK + E +I+ L
Sbjct: 6 KRLMVSRQVKIPRKTYFWGPTPNPGMHPKDQSVTLLSIIRDYLKLSDKEREAARILANGL 65
Query: 181 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 360
+KVDGK + + GFMDV+ I E +R++Y+ +G + + T E A KL KV+
Sbjct: 66 VKVDGKTVREKKFAVGFMDVIEIN--GESYRVVYNDQGALVLMKETKERASMKLLKVRSK 123
Query: 361 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 540
P N L THDGRT D KV D + + KI + IK + GN IT G ++
Sbjct: 124 VIAPGNRIQLGTHDGRTFITDDKSKKVGDVWAVSVPDMKISEIIKMQPGNKAYITAGSHV 183
Query: 541 GRVGTIVSRERHPG-SFDIVHIKDSTGHTFSTRLNNVFIIGKGTKAYISLP 690
+ GTI E G S ++VH ++ FST ++VF+IG +++ P
Sbjct: 184 NQTGTISKIEAKEGSSANLVHFQEG----FSTIKDHVFMIGSSKFSFVLSP 230
>UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S4E -
Caldivirga maquilingensis IC-167
Length = 237
Score = 117 bits (281), Expect = 3e-25
Identities = 68/224 (30%), Positives = 109/224 (48%), Gaps = 3/224 (1%)
Frame = +1
Query: 1 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 180
+R +P+ W +++ G ++ +PS GPH +PL + LR+ YA T E I+ +
Sbjct: 5 RRSTSPEWWPVERKGAPWSIKPSPGPHPANSSIPLAVLLRDVFHYAKTLREARLIIGKGY 64
Query: 181 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 360
+KVDGKVR D YP G MDV+ + NE +R+I D RI EA K+C+++
Sbjct: 65 VKVDGKVRRDYKYPVGLMDVIELTPINEYYRIIPDPVNFLRPIRIDKSEAGVKVCRIEDK 124
Query: 361 ATGPKNVPYLVTHDGRTI---RYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGG 531
L HDGR I + + S+ +++ K+MD+ + + G
Sbjct: 125 TMVKAGKIQLNLHDGRNIIVDQDEGRKYETLGSVVVNLEDGKLMDYYPMQPNQYVIAFNG 184
Query: 532 RNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFSTRLNNVFIIGK 663
N+GR GT+++ R D + + F T LN + +IGK
Sbjct: 185 VNVGRHGTLINWVRSFRKRDAIATVKAKDSEFRTVLNYLLVIGK 228
>UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S4e - Pyrobaculum
aerophilum
Length = 238
Score = 111 bits (268), Expect = 1e-23
Identities = 69/190 (36%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Frame = +1
Query: 1 KRLNAPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 177
+R AP W + K GGV+ RPS GPH L LPL + +R+ LKYA T +E I+ +
Sbjct: 5 RRTLAPAWWPIPRKKGGVWVVRPSPGPHSLAYSLPLALIIRDVLKYAKTMHEARYIISRG 64
Query: 178 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 357
+KVDG VR D +P G MDV+ I T E++R++ D + + I+ EEA KL +V+
Sbjct: 65 YVKVDGVVRRDYKFPVGLMDVIEIVPTGEVYRVVPDADKYYNLLPISTEEAALKLLRVEG 124
Query: 358 VATGPKNVPYLVTHDGR---TIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITG 528
L HDGR T IK DS+ D+ I I + G ++
Sbjct: 125 KTMVKGGRIQLHFHDGRNLITTLEAGKQIKTFDSVLYDLRNKAIKAHIPLKLGVNAVVIH 184
Query: 529 GRNLGRVGTI 558
G N+G GT+
Sbjct: 185 GSNVGFSGTL 194
>UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S4e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 235
Score = 111 bits (268), Expect = 1e-23
Identities = 69/222 (31%), Positives = 108/222 (48%), Gaps = 1/222 (0%)
Frame = +1
Query: 1 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 180
KRL+ PK+W + + G + GPH LPL + +R+ LK E +I+ +
Sbjct: 5 KRLSVPKSWKVGRKGNKWISTTRPGPHSQARSLPLGLIIRDVLKLVDNNREGKRILSEGK 64
Query: 181 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 360
+ VDG R D +P G DV+++ NE +R++ D KGR ++++ E KLC++
Sbjct: 65 VLVDGISRKDLRFPVGLFDVITLPLVNEAYRMLQDEKGRLVLYKLN-ETNVNKLCRINNK 123
Query: 361 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 540
T L +DG I + DS+ L I ++ +KFE GNL M+ GG++
Sbjct: 124 TTVKGGKIQLNLNDGTNILGSND-YGTKDSLILSIPDKHVVKHLKFEVGNLAMVIGGQHS 182
Query: 541 GRVGTIVS-RERHPGSFDIVHIKDSTGHTFSTRLNNVFIIGK 663
G G I+ RE + V I T F T + V +IG+
Sbjct: 183 GETGKIMEIREVKSSRHNTVMISGET--DFETIEDYVIVIGE 222
>UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3;
Methanomicrobiales|Rep: Ribosomal protein S4E, central -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 242
Score = 111 bits (267), Expect = 2e-23
Identities = 74/232 (31%), Positives = 111/232 (47%), Gaps = 7/232 (3%)
Frame = +1
Query: 1 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 180
KRL AP +W + K + + + GPH LP+ ++LR + A +EV KI+ QR
Sbjct: 6 KRLVAPGSWHIPKKVQKFVMKTAPGPHNAG-ALPVGVWLREHIGLAQNASEVKKILHQRD 64
Query: 181 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 360
+ V+G+ D G D+VSI K + +R+ DVKG I E AK +LCK++
Sbjct: 65 VLVNGRACKDSRMGLGVFDIVSIPKLGKHYRIQLDVKGNLVAIEIPAESAKTRLCKIRNK 124
Query: 361 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATT-----KIMDFIKFESGNLCMIT 525
T L G + D K DS+ + + T +I+D + GN+ MI
Sbjct: 125 TTVKGGKVQLNFAFGANV-LADNTYKAKDSVVVTLGTDGEDRFRIVDHFPYAEGNVAMIV 183
Query: 526 GGRNLGRVGTIVSRERHPGSF--DIVHIKDSTGHTFSTRLNNVFIIGKGTKA 675
GG++ G+VG IV R S ++ DS G F T VF++G+ A
Sbjct: 184 GGKHSGKVGRIVEIIRTASSVPNHVILTDDSAGERFETIEEYVFMVGRSAIA 235
>UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2;
Bigelowiella natans|Rep: 40S ribosomal protein S4 -
Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 242
Score = 111 bits (266), Expect = 2e-23
Identities = 58/229 (25%), Positives = 113/229 (49%)
Frame = +1
Query: 1 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 180
KR+++ K G++ + S+GPH + + L+ ++ A E K+VK
Sbjct: 10 KRISSNTMIKYKKKLGIFNTKISSGPHSKVKSVSLLNIIKKFFHLADNNQEAQKVVKTGF 69
Query: 181 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 360
+ V+GK +P MD +S N+ +R++ G+ T++ I E K+CKV ++
Sbjct: 70 LYVNGKKCLSHKFPISLMDTISFPLANKHYRVLLSKAGKLTVYEINQNEKDLKICKVIKI 129
Query: 361 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 540
++T D R ++ IKV DS+ + +I+ +KFE G+LC+IT G++L
Sbjct: 130 INASSKNKIIITDDLRELKINYAKIKVEDSLLIKTINDEIVYALKFEVGSLCLITRGKHL 189
Query: 541 GRVGTIVSRERHPGSFDIVHIKDSTGHTFSTRLNNVFIIGKGTKAYISL 687
G + I + ++H++ G + + +++ +IG+ + +SL
Sbjct: 190 GTIAVIKEIRKTKSLRKMIHLEKIDGKKLTKKCSDLLVIGESKTSILSL 238
>UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S4E -
Uncultured methanogenic archaeon RC-I
Length = 234
Score = 108 bits (259), Expect = 1e-22
Identities = 67/225 (29%), Positives = 107/225 (47%)
Frame = +1
Query: 1 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 180
KR+ AP+ W + + + +P G H +PLV+ LR+ LK A +E+ KI+ +
Sbjct: 7 KRVAAPRTWPITRKTSKWVAKPMPGAHSEERGMPLVVVLRDLLKVADNTSEIKKILHEGK 66
Query: 181 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 360
+ VDGKVR D Y G D +SI N +R++ + G+F H + +A K+CK+
Sbjct: 67 VLVDGKVRKDYRYTVGMFDTISIPAINANYRVVIGMDGKF--HLVPVTDASAKICKIVNK 124
Query: 361 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 540
L HDG T+ + K DS+ L + KI + G+L M+T G++
Sbjct: 125 TALRGGKIQLNLHDGTTMIASND-YKTKDSVILKMPERKIDQHFTYAVGSLVMVTEGKHS 183
Query: 541 GRVGTIVSRERHPGSFDIVHIKDSTGHTFSTRLNNVFIIGKGTKA 675
G +G + + S + + F T VF+IGK + A
Sbjct: 184 GEIGKVKEIKVVRSSAPNTVVITTPEGDFETIEQYVFVIGKDSPA 228
>UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_03001139;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001139 - Ferroplasma acidarmanus fer1
Length = 241
Score = 105 bits (251), Expect = 1e-21
Identities = 65/222 (29%), Positives = 114/222 (51%), Gaps = 2/222 (0%)
Frame = +1
Query: 1 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 180
K + A + + + ++ P+ H + +P++I LR+ LK E+ +I+ +
Sbjct: 7 KIMMASRKLKIPRKTNFWSVTPTPATHSKEDSIPMLIALRDYLKLGDKEREITRILNNNM 66
Query: 181 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK-VKR 357
+KVDG++ D +P GFMDV+SI+ + ++YD KG+ I + P KL K VK+
Sbjct: 67 VKVDGRIVKDRRFPVGFMDVLSIDTLENDYIIVYDRKGKLVIRQNAPGNKGLKLFKVVKK 126
Query: 358 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 537
G + L HDG+TI I +D + + I +I + +K G+ ITGG +
Sbjct: 127 TIIGTGKI-QLGFHDGKTIVTDRKDINTSDVLLMKIPDLEIENVLKIAEGDKVFITGGSH 185
Query: 538 LGRVGTIVSRERHPGSF-DIVHIKDSTGHTFSTRLNNVFIIG 660
+G + TI S E S ++V++ + FST + +F++G
Sbjct: 186 VGELATIKSIEVKKSSVKNMVYLNEG----FSTIKDYMFVVG 223
>UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S4e -
Sulfolobus acidocaldarius
Length = 244
Score = 105 bits (251), Expect = 1e-21
Identities = 75/228 (32%), Positives = 107/228 (46%), Gaps = 8/228 (3%)
Frame = +1
Query: 4 RLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLI 183
R AP + K + R GPHK++E +PL I L+ LK T E +I+ +
Sbjct: 6 RFEAPWFLKVGKKEYKWIIRSRAGPHKIQESVPLAILLKYYLKAVDTTREAKRIIFDGKV 65
Query: 184 KVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVA 363
VDGKVR D YP G MDVV I + R+I D T I+ E+AKYK ++
Sbjct: 66 LVDGKVRRDYKYPVGLMDVVEIPSADLRVRIIPDNVRYLTTINISREDAKYKFVRIMNKT 125
Query: 364 TGPKNVPYLVTHDGRTIRYP-DPLIKVN----DSIQLDIATTKIMDFIKFESGNLCMITG 528
T V L DGR I + L + N ++++++ KI + G MI G
Sbjct: 126 TLKSGVLQLNLEDGRNILLKGEELSQYNLPTLTTLKIELPEQKITTAYTIKEGVYAMIIG 185
Query: 529 GRNLGRVGTI--VSRERHPG-SFDIVHIKDSTGHTFSTRLNNVFIIGK 663
GRN G G I + ++ + +V ++ G TF T L NV IG+
Sbjct: 186 GRNAGLHGKISKIQLAKYKRIKYSLVTLEGKDGSTFQTNLINVMAIGE 233
>UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1;
Methanococcoides burtonii DSM 6242|Rep: Ribosomal
protein S4E - Methanococcoides burtonii (strain DSM
6242)
Length = 236
Score = 103 bits (248), Expect = 3e-21
Identities = 64/221 (28%), Positives = 107/221 (48%)
Frame = +1
Query: 1 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 180
KR++ PK+W + K + GPH + +PL + LR+ L E +++ +
Sbjct: 6 KRISVPKSWQISKKSNKWITSTRPGPHNRLQSIPLAVILRDMLGVVDNRAEAKRVLSEGN 65
Query: 181 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 360
+ VDG R D +P G MD+++I N +R++ D K R ++++ A KLC+++
Sbjct: 66 VLVDGVARKDLRFPVGLMDIITIPLNNVEYRVMLDGKSRLVLNKLDGTGAD-KLCRIEGK 124
Query: 361 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 540
+ + + +DG I DSI L + K++ IK+E GNL MI GG +
Sbjct: 125 TSIKEGKIQMRLNDGVNI-IGSNNYNTKDSIILSVPDKKVVKHIKYEVGNLAMIVGGSHA 183
Query: 541 GRVGTIVSRERHPGSFDIVHIKDSTGHTFSTRLNNVFIIGK 663
G VG+I S + + S F T + VF+IG+
Sbjct: 184 GEVGSIKEINTVKSSKNNT-VTISGEIEFETIEDYVFVIGE 223
>UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmental
samples|Rep: Ribosomal protein S4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 232
Score = 102 bits (245), Expect = 7e-21
Identities = 66/222 (29%), Positives = 106/222 (47%), Gaps = 2/222 (0%)
Frame = +1
Query: 1 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 180
KRL P++W L + ++ +P+ G H C+PL + LR+ L A E +++ R
Sbjct: 7 KRLTMPRSWPLTRKTDIWVQKPNPGGHSDEMCMPLGVILRDVLDLAHNLREAKRMLATRQ 66
Query: 181 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 360
+ VDG++ TD G MDV+++ + + FR I DV G+ I+ + A KLC+V
Sbjct: 67 VLVDGRIETDLGRGVGLMDVLTVGE--DSFRCILDVNGKLRYRSISDKAAASKLCRVMGK 124
Query: 361 ATGPKNVPYLVTHDGRTIRYPD-PLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 537
+T + HDGR I D L D++ + + + F G +TGG +
Sbjct: 125 STITDGKTQIHLHDGRNILVSDAKLYDSGDTLVISLPDQSVAGHHPFSKGATAYLTGGSH 184
Query: 538 LGRVGTIVSRE-RHPGSFDIVHIKDSTGHTFSTRLNNVFIIG 660
+G +VSR+ + + V D F T + VFIIG
Sbjct: 185 IGITAKVVSRDIKRSSKPNEVQFPD-----FGTVADYVFIIG 221
>UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1;
Picrophilus torridus|Rep: 30S ribosomal protein S4e -
Picrophilus torridus
Length = 234
Score = 96.7 bits (230), Expect = 5e-19
Identities = 72/231 (31%), Positives = 111/231 (48%), Gaps = 1/231 (0%)
Frame = +1
Query: 1 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 180
K + AP+ + + +A G HK +PL+I LR+ LK E+ +I+ L
Sbjct: 6 KIMMAPRKLKIARKSRFWAVNSLPGSHKKDSSIPLLIALRDYLKLGDKEREITRILTNSL 65
Query: 181 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 360
+ VDGKV + GFMD +++ + L + YD KG+ I E KL +VK
Sbjct: 66 VMVDGKVVKERRRGIGFMDTLTVSGNDYL--VSYDRKGKLVILPKPGETKGLKLLRVKGK 123
Query: 361 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 540
+ HDG T+ IK DS+ + I +I+D +KF GN ITGG ++
Sbjct: 124 TYVKGGRIQISFHDGSTMVTDRKDIKNGDSVLVKIPKKEIVDVLKFAPGNRVFITGGSHV 183
Query: 541 GRVGTIVSRE-RHPGSFDIVHIKDSTGHTFSTRLNNVFIIGKGTKAYISLP 690
G + TI S E + ++VH+ + FST + VF++G K S+P
Sbjct: 184 GEIATIKSIEIKSSSGENMVHMNEG----FSTVSSYVFVMG-SPKYTFSMP 229
>UniRef50_P62429 Cluster: 30S ribosomal protein S4e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S4e -
Nanoarchaeum equitans
Length = 234
Score = 96.7 bits (230), Expect = 5e-19
Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 2/188 (1%)
Frame = +1
Query: 1 KRLNAPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 177
+ L P+ W + K G + +PS GPH +P+ ++LR+ L A EV ++
Sbjct: 10 RSLAVPRTWPVPRKSRGYWIVKPSPGPHSKEFAMPIAVWLRDYLGLAENMREVRYLLNNG 69
Query: 178 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK-VK 354
+ VDG+ D +P G DV++I + NE +R++ D +G+ + +I EEA K K ++
Sbjct: 70 KVLVDGRPIKDYKFPVGLFDVLAIPEINEYYRVLLDERGKLYLKKIDKEEANIKYGKIIR 129
Query: 355 RVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGR 534
+V+ + Y +T DGRT D K + + +I KI + I E I G+
Sbjct: 130 KVSVRGGKIQYTLT-DGRTF-LGDNSYKTHYGVVYEIPNFKIREVIPLEKDRKAYIIRGK 187
Query: 535 NLGRVGTI 558
+ GR+G I
Sbjct: 188 HTGRIGVI 195
>UniRef50_A2SPL4 Cluster: Ribosomal protein S4E, central; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S4E, central - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 239
Score = 93.1 bits (221), Expect = 6e-18
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 4/224 (1%)
Frame = +1
Query: 1 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 180
KR+ AP AW + + Y S+GPH LP+ I+LR+ +++AL EV KI+ R
Sbjct: 5 KRMTAPDAWQIARKESKYVVSTSSGPHD-GSALPIGIWLRDHMQFALNTKEVRKILHDRQ 63
Query: 181 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 360
+ ++G + TD D++S K ++ + ++ D KGR + I+ + AK +L KV
Sbjct: 64 VLLNGHIVTDEHIGIDVFDIISFPKIDKHYMILVDEKGRHNEYEISADAAKLQLVKVANK 123
Query: 361 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIA---TTKIMDFIKFESGNLCMITGG 531
T + G + K DS+ + IA + + GN+ +I GG
Sbjct: 124 TTIKGGKTQINLTSGANF-IGEENCKGKDSLVIGIAGDDRFAVQQHFPYAVGNMAIIIGG 182
Query: 532 RNLGRVGTIVSRERHPGSF-DIVHIKDSTGHTFSTRLNNVFIIG 660
++ + G +V S + V I+D+ G+ F T + V++IG
Sbjct: 183 QHTMKTGKLVEILVQESSLPNRVIIEDADGNKFETIEDYVYMIG 226
>UniRef50_P22510 Cluster: 30S ribosomal protein S4E; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S4E -
Haloarcula marismortui (Halobacterium marismortui)
Length = 234
Score = 85.4 bits (202), Expect = 1e-15
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 2/221 (0%)
Frame = +1
Query: 1 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 180
KRL+ P +W +++ + + GPH +PL+I LR+ L YA E + +
Sbjct: 6 KRLSVPNSWPVERKTATFTVKAGAGPHG-ESGVPLLIVLRDVLGYADNRKEARYALNEDN 64
Query: 181 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 360
+ ++GK +D P G D+++ + E +R+ GR + I P+ A+ KL K+
Sbjct: 65 VLINGKAISDEERPVGMFDILAFTEREEYYRVFPGEGGRLALTAIDPDAAQSKLGKIVTK 124
Query: 361 ATGPKNVPYLVTHDGRT-IRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 537
L HDG T I D DSI + +++ ++E G L G +
Sbjct: 125 THVSGGDVQLGLHDGETLIVEDDQTYDAGDSIVVGNEDGEVVAHFEYEEGALVTAVDGAH 184
Query: 538 LGRVGTIVSRERHPGSF-DIVHIKDSTGHTFSTRLNNVFII 657
G VG + + PGS + V + G F T V +I
Sbjct: 185 AGEVGEVEEIQVTPGSAQNNVIVSQDEGEGFETVEEYVVVI 225
>UniRef50_A0RVY5 Cluster: Ribosomal protein S4E; n=2;
Thermoprotei|Rep: Ribosomal protein S4E - Cenarchaeum
symbiosum
Length = 238
Score = 81.0 bits (191), Expect = 3e-14
Identities = 51/186 (27%), Positives = 81/186 (43%)
Frame = +1
Query: 1 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 180
KR AP W + + G + G H +P + LR+ L T E K +
Sbjct: 11 KRQMAPSFWGITRKGKRFVVTVHPGAHSKHRSIPSAVLLRDTLGAVSTLREAKKSIYSGN 70
Query: 181 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 360
++VDG RT + G MDVV + T +++R++ +I E K+C+V
Sbjct: 71 VEVDGVKRTSLHHGIGLMDVVELGGTGDIYRMVPSGGAILKPVKIEAAEKDRKICRVTSK 130
Query: 361 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 540
+ + HDGR++ D + V DS + + KI+ + E G ++T G N
Sbjct: 131 TSISGGRTQIGFHDGRSL-ISDEKVSVGDSCLVQVPGQKILKVARMEKGAHAVVTRGTNA 189
Query: 541 GRVGTI 558
G GTI
Sbjct: 190 GSTGTI 195
>UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
sequence - Ostreococcus tauri
Length = 197
Score = 80.6 bits (190), Expect = 3e-14
Identities = 52/151 (34%), Positives = 79/151 (52%)
Frame = -2
Query: 687 QRDVRLSALADYEHVVQPRGEGVSRGVLDVHNVEGAGMSLAGHDGAHTPQVTASRDHTQV 508
+RD RL A D EHV + R + ++ GVL VHN EG + LA D V + DH Q
Sbjct: 43 KRDHRLVARTDGEHVRRARRKLLTGGVLQVHNFEGTDVLLAALDHPDATGVVTTGDHAQS 102
Query: 507 PRLKLDEVHNLRSCDV*LDGIVDFDKWVWVADGAAIMRYQVRNILRSGRHTLDFTQLVLS 328
++LD + +L DV +G+ D + V +GAA+++ R+ L QLVL
Sbjct: 103 ADVELDRIGDLVRRDVDHNGVTLLDHGIRVTNGAAVVQTDARHALVPELLAPHLAQLVLR 162
Query: 327 LLRGDTVDCESALNIID*TKQFISLLN*DNI 235
D V ES+L ++D + FI+L + D++
Sbjct: 163 FDSLDAVHNESSLGVVDEPEVFIALFDGDDV 193
>UniRef50_A5BV74 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 186
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/69 (33%), Positives = 39/69 (56%)
Frame = -2
Query: 690 RQRDVRLSALADYEHVVQPRGEGVSRGVLDVHNVEGAGMSLAGHDGAHTPQVTASRDHTQ 511
R+R RL LA+ EH+ Q + + G+L+V ++G + L D ++T V ++ H
Sbjct: 108 RKRYPRLCPLANDEHIAQTSCKFMPSGILNVDGLKGPLVLLPVLDDSNTAPVPSTSHHDN 167
Query: 510 VPRLKLDEV 484
+P +K DEV
Sbjct: 168 IPNIKFDEV 176
>UniRef50_A0BHK0 Cluster: Chromosome undetermined scaffold_108,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_108,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 246
Score = 40.3 bits (90), Expect = 0.043
Identities = 25/76 (32%), Positives = 42/76 (55%)
Frame = +1
Query: 67 STGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVS 246
+T P +L + + L + ++ K L E L I KQ+ +KV+ K + DPT+P D S
Sbjct: 100 NTQPRELLKVVNLDPKIMDKEKKKL--EEELDINKQQKVKVEHKKQLDPTFPRNDFDKFS 157
Query: 247 IEKTNELFRLIYDVKG 294
IE +++ L+ + KG
Sbjct: 158 IEDMDQVLNLLSNYKG 173
>UniRef50_UPI000038E364 Cluster: hypothetical protein Faci_03000514;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03000514 - Ferroplasma acidarmanus fer1
Length = 317
Score = 37.5 bits (83), Expect = 0.31
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = -2
Query: 267 QFISLLN*DNIHKSSRISRVSPNFPINLYEALFHNFQDFVSGQSILQTIPQENHQGQALA 88
Q I+ N +NI + I + N P E LFH F DFVSG ++ I + + + +A
Sbjct: 50 QVINTYNDENILEIINIPDIKYNIPDAEKEILFHKFIDFVSGNKLISGIMKIMYLDRKIA 109
Query: 87 QLV 79
Q +
Sbjct: 110 QFI 112
>UniRef50_A5BNN8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 906
Score = 34.7 bits (76), Expect = 2.2
Identities = 32/103 (31%), Positives = 44/103 (42%)
Frame = -3
Query: 533 RPPVIIHKFPDSNLMKSIIFVVAMSNWMESLTLISGSG*RMVRPSCVTKYGTFLGPVATR 354
RPP H SN + S + A S +S+TLI +R T TF+ VA
Sbjct: 298 RPPRTAHIAQSSNPLLSRLDSTASST-SQSITLIGSDYDAYLRYQAATS--TFVASVAQT 354
Query: 353 LTLHNLYLASSGVIRWIVNLPLTS*IRRNSSLVFSIETTSINP 225
+ + SS + WI++ + I N L SI TTS P
Sbjct: 355 DNVSVCFTQSSSLGPWILDSGASDHISGNKHLFSSITTTSALP 397
>UniRef50_UPI0000E814A8 Cluster: PREDICTED: similar to MEGF6; n=1;
Gallus gallus|Rep: PREDICTED: similar to MEGF6 - Gallus
gallus
Length = 1119
Score = 34.3 bits (75), Expect = 2.9
Identities = 23/52 (44%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Frame = -1
Query: 667 CPCRL*TRCSTSWRRCVPWSP*CAQ----CRR-SRDVSRGTRWCPHAPSYGL 527
C CR R RRC PWSP CAQ C + RDV +G C P Y L
Sbjct: 144 CRCRRQYRLREDGRRCAPWSP-CAQRNGGCMQLCRDV-QGAARCECRPGYRL 193
>UniRef50_A6GEF6 Cluster: Hydrolase, alpha/beta fold family protein;
n=1; Plesiocystis pacifica SIR-1|Rep: Hydrolase,
alpha/beta fold family protein - Plesiocystis pacifica
SIR-1
Length = 310
Score = 33.9 bits (74), Expect = 3.8
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +1
Query: 25 WMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVR 204
W +D LGG+ K+R LP+ +F ++ G V +V + ++ G R
Sbjct: 216 WWVDFLGGLIELGDDAKLRKIRADLPIYVFAGDQDPVGAQGKNVRALVDR--LRATGHAR 273
Query: 205 TDPT-YPAGFMDVVSIEKTNELFRLIYDVKG 294
T YP G ++++ + +++ R + D G
Sbjct: 274 VKQTLYPGGRHEMINERERDQVTRELIDWLG 304
>UniRef50_UPI0000D5573E Cluster: PREDICTED: similar to
Tyrosine-protein phosphatase non-receptor type 13
(Protein-tyrosine phosphatase 1E) (PTP-E1) (hPTPE1)
(PTP-BAS) (Protein-tyrosine phosphatase PTPL1)
(Fas-associated protein-tyrosine phosphatase 1) (FAP-1);
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
Tyrosine-protein phosphatase non-receptor type 13
(Protein-tyrosine phosphatase 1E) (PTP-E1) (hPTPE1)
(PTP-BAS) (Protein-tyrosine phosphatase PTPL1)
(Fas-associated protein-tyrosine phosphatase 1) (FAP-1)
- Tribolium castaneum
Length = 768
Score = 33.1 bits (72), Expect = 6.6
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +1
Query: 388 LVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMI 522
+ DGR ++ D +IKVND ++TT+I+D ++ G +C++
Sbjct: 708 VAARDGR-LKPGDRVIKVNDESVEHLSTTEIIDLLRIVRGPVCIV 751
>UniRef50_A0YER0 Cluster: Putative uncharacterized protein; n=1;
marine gamma proteobacterium HTCC2143|Rep: Putative
uncharacterized protein - marine gamma proteobacterium
HTCC2143
Length = 110
Score = 33.1 bits (72), Expect = 6.6
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = +3
Query: 432 YQSQRFHPVRHRNYEDYGLHQV*VWELVY--DHGRP*LGACGHHRVPRETSRLLRHCAHQ 605
+ + + HP+R Y G+ V +LV DH R A HR R RL + H+
Sbjct: 31 FHAFKIHPLRIA-YRT-GIDVTLVQQLVSGEDHQRLFKAALARHRKSRRDQRLHKSLRHK 88
Query: 606 GLHGTHLLHEVEQRVHNRQG 665
G+ L H++EQ +G
Sbjct: 89 GIAQAELQHKIEQDYQETKG 108
>UniRef50_Q5UP36 Cluster: Cysteinyl-tRNA synthetase; n=1;
Acanthamoeba polyphaga mimivirus|Rep: Cysteinyl-tRNA
synthetase - Mimivirus
Length = 509
Score = 32.7 bits (71), Expect = 8.7
Identities = 14/54 (25%), Positives = 32/54 (59%)
Frame = +1
Query: 28 MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKV 189
+LDKLG +Y S+ HK+++ + ++I R++L+ ++ +K++L +
Sbjct: 421 LLDKLGFIYRVGNSSSSHKIKDLMNILIETRSQLRQLTRNPDLSPGIKKQLFDI 474
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 772,807,678
Number of Sequences: 1657284
Number of extensions: 17095559
Number of successful extensions: 55562
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 52585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55501
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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